Basic Information

Insect: Encarsia formosa
Gene Symbol: RREB1_1
Assembly: GCA_030522645.1
Location: JAPYYY010004221.1:2539-10602[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.022 6.3 9.2 1.0 1 21 80 100 80 103 0.95

2 15 0.00077 0.22 13.8 0.3 1 23 125 147 125 147 0.98

3 15 8.4e-07 0.00024 23.1 1.2 1 23 153 176 153 176 0.97

4 15 0.0038 1.1 11.6 0.3 1 23 255 279 255 279 0.95

5 15 3.6 1e+03 2.2 0.6 1 16 341 356 341 360 0.80

6 15 0.11 32 7.0 0.1 1 23 474 496 474 496 0.96

7 15 4.8e-05 0.014 17.6 0.5 2 23 507 528 506 528 0.97

8 15 0.00033 0.093 15.0 2.5 1 23 534 557 534 557 0.97

9 15 0.00028 0.081 15.2 1.4 1 23 950 973 950 973 0.97

10 15 0.00091 0.26 13.6 0.4 3 23 1239 1259 1237 1259 0.97

11 15 0.57 1.6e+02 4.8 7.3 1 23 1265 1288 1265 1288 0.96

12 15 0.0039 1.1 11.6 2.2 1 23 1338 1362 1338 1362 0.97

13 15 3.1 8.8e+02 2.4 3.3 1 23 1456 1479 1456 1479 0.89

14 15 0.014 4.1 9.8 0.5 3 23 1535 1555 1533 1555 0.93

15 15 0.042 12 8.3 6.6 1 23 1561 1583 1561 1583 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.022	6.3	9.2	1.0	1	21	80	100	80	103	0.95
2	15	0.00077	0.22	13.8	0.3	1	23	125	147	125	147	0.98
3	15	8.4e-07	0.00024	23.1	1.2	1	23	153	176	153	176	0.97
4	15	0.0038	1.1	11.6	0.3	1	23	255	279	255	279	0.95
5	15	3.6	1e+03	2.2	0.6	1	16	341	356	341	360	0.80
6	15	0.11	32	7.0	0.1	1	23	474	496	474	496	0.96
7	15	4.8e-05	0.014	17.6	0.5	2	23	507	528	506	528	0.97
8	15	0.00033	0.093	15.0	2.5	1	23	534	557	534	557	0.97
9	15	0.00028	0.081	15.2	1.4	1	23	950	973	950	973	0.97
10	15	0.00091	0.26	13.6	0.4	3	23	1239	1259	1237	1259	0.97
11	15	0.57	1.6e+02	4.8	7.3	1	23	1265	1288	1265	1288	0.96
12	15	0.0039	1.1	11.6	2.2	1	23	1338	1362	1338	1362	0.97
13	15	3.1	8.8e+02	2.4	3.3	1	23	1456	1479	1456	1479	0.89
14	15	0.014	4.1	9.8	0.5	3	23	1535	1555	1533	1555	0.93
15	15	0.042	12	8.3	6.6	1	23	1561	1583	1561	1583	0.97

Sequence Information

Coding Sequence: ATGCTTGTTCGTCCCCAGGAGTCAATCGCTTTGGTCAAAATGAACCCAGGAACATCCGCGGGTACCACAATGGTTCCGGAAAATCACGATACCGGCTCGGTCGTCAGGGTGACCGCCGAGACTGGACCcaagcagcaccagcagcactCCGACGAGAACCAAACGGATGTTCCATCATCGCCACCGtaCGGCATTTTGAACTACAAGGTCGGCTCGGCGAGGCAGGAAGGCGGCGCATACCCTTGTCCAGCCTGTCCGCTGATGCTCACAAGTTCGCACGACCTGACGAATCACCTGCGCTGTCTGCACAGCTCGCCACCGCGAAGCGCCAGCAGCAGTGCCACGACCGACAGCAGCGACCACCTCGACTCCTACTCCTGCGGGGTTTGTCACAAAGTCCTGAGCTCGGCGAACTCCCTAGACCGACACGTTTTGGTCCACTCGGGCGAGCGGCCCTTCAAGTGCAAGTACTGCGACATGGCCTTCACCACAAACGGCAACATGAACAGGCACCTCAGAAACGCCCACTTGCCCCTTGGCAGGGCCAACATGTCGCCCTACTGCACCGACTCCGAGGGCAGCAGTGACTCCGAGAGACCGATGAACCACCGACACCAGCACCACCTCGGCGAATACAACAACAACGAGGTGGCCAAGCGGAAGTCCCCGGAGCTTCTGCTCGAGCACGTCAAGAGGCCGAGGCTCTCGCCCGACAAGACCAAAGACGAGGGATTTTCCGAGTCCGGAAGCCTTCCGACCTCCTACTCCTGCACCGTCTGCGGCAAACAGGAGTTCGCCTCGAGCGCTCACCTGGAGGCTCACCTGGAGAGCAGCCACCCTGAGATCTTCAAGAACCACCGGGCCCTCAACATCCACCGGCTCATGATGCGCGGCAAGAACTCCGTGGTTGGTTTCAACGATCTCACCTTCGTCGATTTCTCCTCGGGAAAGTTCCCCGCCATCGCCAGGGCGGTTTGCGAGCAATCGTTACACCGACCTGCCTCGGGCGAGACCCCAAAATACCAGTGCTCCAAGTGTCTCCGGGCGTTCCCGTGTCAATCAGCCCTGGACGGACACGAGGTCGACTGCGGACACCCACCCAACCACAGACTGATGCGCGACGACCAATCCCTAAGGGACGACTTCTTTGCCAACCTGGATTTACAGAACAAGGCTGCACTGGCCGAGGCCAAAGAGGGCAAGGACCTCGCCGACATACAGAGCATCATATCTGTGACCTCGGGTCCCATTCTTCACAACTTTTCTCGCTCCGACGCAAGCACGCCCGATAATTGCAAAGTAAAGCAGAACCACCACGGCTCGTCCGCTTCTTCGGGGACACCGTCCTCCGAGCACCACGAGGAGGAAGCCCAAGATGCCTTCGCTGCCGAGTTTAGAAAGATGAAGATGAAGGGCGAATTTCCCTGCAGATTATGCAAGGCCATCTTCCCGAACTTGCGAGCTCTCAAGGGACACAACCGGGCACACTTGGGCTCGGTTGGTCCGGGTATGCCCATACCTTGCAACATGTGCCCCTACAGCAGCACTGACAAAAATACACTTCAGAGGCACTTGAGATCCCACAACGGTGACAGGCCCTACGAATGCTCCATATGCAACTACGCTTTCACCACGAAAGCCAACTGCGAGAGACACGTCAGAAATCGTCATGGAAAACTGTCGagagaagaaattaaaaatgccCTTATCTATCACCCCAGCGAGGATTCGACCAACGACGCCAGTCTCGAGAGAAACTCTCCTCGAAGCGGAGCAGGGTTGGTGAGGGACGAGGTTCGTAAAACTCTGGTCTACTCCGAGCGAGAAGAACAACCATCGTCACAACCACAGCAGCCACTTCATTATCCTGCTGAAATTAGGATCAAGGACGAATCGAAGCTACGACAGCCAGGATTACCAGGGCTTATGAGCGTCGTCAACGATGCGTTCCCGAGGCCCGAGCCTTTGGAACTCAGCTACAGGGGTGAAGAACTCGACGCCAAGCTGGAATCGATAAAGCACGATGAAGACAACGAATCCAGGTCCTCGGAAGGTAGCATGTCTCTAGTCAGTGAAACCAAAGTGGTCGAAAACCAAAGAATTCAGGGCAGCCCAATGGATCTGAAAAAATCAAGTGTCGCCACCGATAGTTCACCGGAAGAAGTTGGCAGCAACGTCGACGCCCCTCTCGATCTCTCGATGGACGTGTTGGATCTCAGTAAAAGATCAGcagccgccgctgctgctgctgcttcttccTCTTCCGATGCTGCCACCGCAACCACCACTGAGGAAAAGGACAAAGAAAGCAACGACGCCAGCGTGGAAGCCCTTGCCAAGAACCACAAGGACTTCTACAACACAGCTAACCAGTTGCTCTTAACCCAGGCGCTCATCAAGGCCGGACACGTTGGCGTGCCTCCGCCATCCTTCGAATCTTTGTACGCAAATCCACACATGATGTATCCGAACTTCAGTGCATTTCCTGGTGCTGGAATGATCCCACCGTACCTCTTCGCGCCCTTTGGACAGGACTTTGGCATCAAGGACAGACTGCAGAAAGAGTTGGTACGTGGACTCCAGACCAGCGGAGGTAGACTCGTCGACGCAGACTACAGTCCAACTCCGGAGTACAGTACCACGGCGGCTTTTCCCCAAACTCGCAATCCAATCAGCGACTACCAAAAAGACTTTGGCGATCTCAGGTCACCCAAGATAAGTAAAAAAAGCGCACCCACGCGAGAAAAAGACGGCGAGTCGTCCTCCTCGAACTCGGTCAAAATGGTCTACAAAAACGGTTGCTTCATGCCCAAACAAAAACAGCGGCGTTACAGAACCGAGAGACCTTTCAAGTGTCAATACTGCTCAGCTGGTTTCACCTTGCGAAGCAACATGGAGCGACATATAAAGCAGCAGCATCCACAACACTGGAAGCAAAGAATAAGAGGAGCACACTCGACTCGAGGACGACCACCGGCGAATCCTCCGACTCTCGTGCAGAATTTGCGACCTTCTCAAATATCTCCTTCATATTCAAGCCACCTGTCAAAGCTGGACCAACCACTATCCTCGGATTATGGAAAGCACGCCATTTCGGACCAAGTCAAATACGCCATCTTGGCGCAACAGCTAAAGGGAACCAAAACCGAAGACAACGAATCTGACGAAGAACTGATCATCGATGAGGCTGCCAATTTAGCCAAAGAAAGTAAAGAATCCAAAGAACCCACCGAAAGGACTCTGAGCCTTTTGAGAGACAAGCTCGAGGCGAACATTGAGTCGAGAGGATCGGAAAACTTTCATCCTCCCGACATTCATTCTCTGTGTGAAGTCAAAATGGAAGTTGAAGAAAAATCCGAGGCCGACAGCAAAGAAGACGTCCACTTAAAAGAAGACGAGTCTAAGGCTCATGTAAAATCCGAAATTCAATCGGATGAGAGAATGGAATACACCGAAAATCAAGATCTCGCAAGCGTTTCGGAAATTCTGGACAACGCATCGCAGCACTACCAACACTTTCAGTCCCAGTACATCAGCGACGAAGAAGGTTTGGTTGCCTCAACCAGCGACTGCAACCAGTCGGGTAGCGACGAAAAGTCCGACTCCATGAATTCCGGTAACTCTGAACACTCCTCGCACAAtaggaaaaagaaaatgatcaagaaaaagaagaaaaagaagtcgGCCTACTCGATGGCACCAAATCGAGTAATATGTCCCTATTGTCAGCGACCCTTTCCATGGCACTCGTCTTTGAGGCGTCACGTTCTCACACACACCGGCCAAAAACCATTCCGGTGCACGCACTGCTCTCTACTATTCACCACGAAGTCAAACTGTGATCGTCACTTGTTGAGAAAGCACAAGAAGGAGTTGGGCTTGAAGATACGTAGAACTCGCAGCACCTCTTCGCCTGAAATGCAAGAGGCACCGGAAACGAGCAGGACTTTGGCACCTTCGCCTACCAACAACAACAGTCAGTTTTCCATGAGGAACGTTCCAGAAAGGCCGTACAAATGCAACCAGTGCCCAAGCTCGACCTTCTCGACTCTTGGCAATTTGAAGAAACACCGCTCGACGAAACATGGAGTCTACATGAGATCTAGACCCGAGTCACCCTCGAAGAAGCCCCACGAATCTCCCGAAGACTACTGCTCAAAACAAAACGACCAGAGCGGCTACGAGAGCCAGTCGTCGGGAGTATCCGACAACATGGAAAACTTCGGCTCGGAACCAAACGACCTCTCGAAGAACATGAGCAGTGCCAATAATACGTCCTCGTCTGCAAACGAAGCCTCGAGATCGAGAAAAAATTCTCCGAGATCTTCACCAGGACCCACAAACAACAATAATCCCGAGACACCTTTCAAGTGCCACCTCTGCGACAGCGGATTTTCCGAGAGAAACGACTGTCTCGATCACATCAAGGACAATCACGAGCAGTCGTATGAAATGCTTGTGGCCAAAGGTCAAGCTCGCGGCTTGGACATGGACGATGGCTTCGACGACCCGATGCCACCCTATCCTCCACAGTCGCAGAATCCCGGTGACGGCGAGGTCAAGAGAGGGAGATTTCCAGACTACAGCAACAGAaagGTGATGTGCGCGTTTTGCATGCGACGTTTCTGGTCGGCGGAGGACCTTCGCCGTCACATGCGCACCCACACGGGGGAGAGGCCATTCTTCTGCGACATCTGCTTCCGCAAATTCACCCTGAAGCACAGCATGCTCCGCCACCGCAAGAAGCACGAGTCGGTCGACTCGAGCATGTACGTGGGCACAAGCGGAGACGAGGACTGCGGTGTCTCGATAACGGCGCCCTCGCTGGTCTCGTCCTCGCACCAGCCACCCACGATAACTCCTCGCAGCCAGCAGCCGTCGTCCTCGGCTTCGTCGGCGAGCTCGGTTGGCAGCGGCGTCGCTCGTCTTCAGGAGCGAGCCTCCCTGCCGCAGGTGGCGAGCGTGGCCACCGGTGACGCCGCTCCCAGCAGCTTCATGAGGTTCAACCCCTACGATAAACTCTCGGCCCTCAGTGGCAAGCTGAGCATGTCGCCCGCGAATATGAGCATCGACGCCAACGACAACGAAGAGAACGATCTCATTTCGGATCTGCTCGGCTTCAGAGACAAGAGCATAATCGACCGAGCGCTGCAGGCACCCTCGGTCGACGTTGCGGCGAAAATAATAGGCGTCAAGGGAAATCACGAGTATGAAACTCGAAGCGATAAAAGTATGTAA
Protein Sequence: MLVRPQESIALVKMNPGTSAGTTMVPENHDTGSVVRVTAETGPKQHQQHSDENQTDVPSSPPYGILNYKVGSARQEGGAYPCPACPLMLTSSHDLTNHLRCLHSSPPRSASSSATTDSSDHLDSYSCGVCHKVLSSANSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRNAHLPLGRANMSPYCTDSEGSSDSERPMNHRHQHHLGEYNNNEVAKRKSPELLLEHVKRPRLSPDKTKDEGFSESGSLPTSYSCTVCGKQEFASSAHLEAHLESSHPEIFKNHRALNIHRLMMRGKNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGETPKYQCSKCLRAFPCQSALDGHEVDCGHPPNHRLMRDDQSLRDDFFANLDLQNKAALAEAKEGKDLADIQSIISVTSGPILHNFSRSDASTPDNCKVKQNHHGSSASSGTPSSEHHEEEAQDAFAAEFRKMKMKGEFPCRLCKAIFPNLRALKGHNRAHLGSVGPGMPIPCNMCPYSSTDKNTLQRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREEIKNALIYHPSEDSTNDASLERNSPRSGAGLVRDEVRKTLVYSEREEQPSSQPQQPLHYPAEIRIKDESKLRQPGLPGLMSVVNDAFPRPEPLELSYRGEELDAKLESIKHDEDNESRSSEGSMSLVSETKVVENQRIQGSPMDLKKSSVATDSSPEEVGSNVDAPLDLSMDVLDLSKRSAAAAAAAASSSSDAATATTTEEKDKESNDASVEALAKNHKDFYNTANQLLLTQALIKAGHVGVPPPSFESLYANPHMMYPNFSAFPGAGMIPPYLFAPFGQDFGIKDRLQKELVRGLQTSGGRLVDADYSPTPEYSTTAAFPQTRNPISDYQKDFGDLRSPKISKKSAPTREKDGESSSSNSVKMVYKNGCFMPKQKQRRYRTERPFKCQYCSAGFTLRSNMERHIKQQHPQHWKQRIRGAHSTRGRPPANPPTLVQNLRPSQISPSYSSHLSKLDQPLSSDYGKHAISDQVKYAILAQQLKGTKTEDNESDEELIIDEAANLAKESKESKEPTERTLSLLRDKLEANIESRGSENFHPPDIHSLCEVKMEVEEKSEADSKEDVHLKEDESKAHVKSEIQSDERMEYTENQDLASVSEILDNASQHYQHFQSQYISDEEGLVASTSDCNQSGSDEKSDSMNSGNSEHSSHNRKKKMIKKKKKKKSAYSMAPNRVICPYCQRPFPWHSSLRRHVLTHTGQKPFRCTHCSLLFTTKSNCDRHLLRKHKKELGLKIRRTRSTSSPEMQEAPETSRTLAPSPTNNNSQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHGVYMRSRPESPSKKPHESPEDYCSKQNDQSGYESQSSGVSDNMENFGSEPNDLSKNMSSANNTSSSANEASRSRKNSPRSSPGPTNNNNPETPFKCHLCDSGFSERNDCLDHIKDNHEQSYEMLVAKGQARGLDMDDGFDDPMPPYPPQSQNPGDGEVKRGRFPDYSNRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFFCDICFRKFTLKHSMLRHRKKHESVDSSMYVGTSGDEDCGVSITAPSLVSSSHQPPTITPRSQQPSSSASSASSVGSGVARLQERASLPQVASVATGDAAPSSFMRFNPYDKLSALSGKLSMSPANMSIDANDNEENDLISDLLGFRDKSIIDRALQAPSVDVAAKIIGVKGNHEYETRSDKSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -