Basic Information

Insect: Encarsia formosa
Gene Symbol: salm_1
Assembly: GCA_030522645.1
Location: JAPYYY010003489.1:21699-34986[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.8e-06 0.0014 20.7 0.9 1 23 416 438 416 438 0.98

2 9 9.5e-06 0.0027 19.8 2.1 1 23 444 466 444 466 0.98

3 9 0.56 1.6e+02 4.8 1.8 3 23 864 884 863 884 0.92

4 9 1.5e-06 0.00043 22.3 0.9 1 23 890 912 890 912 0.97

5 9 0.0014 0.41 12.9 4.1 1 23 922 944 922 944 0.97

6 9 0.016 4.5 9.7 3.8 2 23 1205 1226 1204 1226 0.97

7 9 0.012 3.4 10.0 0.3 1 14 1232 1245 1232 1248 0.92

8 9 9.8e-07 0.00028 22.9 2.1 3 23 1489 1509 1487 1509 0.96

9 9 7.3e-08 2.1e-05 26.4 0.8 1 23 1515 1537 1515 1537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.8e-06	0.0014	20.7	0.9	1	23	416	438	416	438	0.98
2	9	9.5e-06	0.0027	19.8	2.1	1	23	444	466	444	466	0.98
3	9	0.56	1.6e+02	4.8	1.8	3	23	864	884	863	884	0.92
4	9	1.5e-06	0.00043	22.3	0.9	1	23	890	912	890	912	0.97
5	9	0.0014	0.41	12.9	4.1	1	23	922	944	922	944	0.97
6	9	0.016	4.5	9.7	3.8	2	23	1205	1226	1204	1226	0.97
7	9	0.012	3.4	10.0	0.3	1	14	1232	1245	1232	1248	0.92
8	9	9.8e-07	0.00028	22.9	2.1	3	23	1489	1509	1487	1509	0.96
9	9	7.3e-08	2.1e-05	26.4	0.8	1	23	1515	1537	1515	1537	0.98

Sequence Information

Coding Sequence: ATGCAGCTCATGCGGTGGAGCATCACCAGGAGGCTCGGCAGCCGAGAGGACAAGCAGAGACGGGAGGCGGCCAGGAACTGCGCTAACTCCGgagaAGACAATGACTCGGTTTCGGAGGGCGAGGAGAGCGCCGTAGGTGGCGCGATTGGCGAGGAGGCGGTTGACCTCACTTCGGCTCGCTCGCACCACGAGGACGAGCTTGACGAGCGCGACCCCGAGGATCTACCGGTTCCCGAAGACGAGGATTTGGACGACCAGGACGAGCCCGAGGACTTCGAGACCGCGGCAGCCAAAATCACAACCGGCGTCAAGAAGCTTCGCCAGGATGTCGCGGGAAACGAGGACGACGAGGAGGGCTCCTGTAAGCGCATGCGTCTTTGCCAGGATGCCGAGAACAACAACAGCTTCGTCGAGGGCAACGCCACGACCCCAGCCCCCGGTTTTCCCCCGGGTGCTACACCCGGCACTAGTCACGTCACCCTGGAGGCCCTCCAGAACACCTCGGTCGCGGTGGCCCAGTTTGCCGCCACGGCCCTGGGAGGTGGCGCCGACAGCGAGGCCGCCCGACAGCAGCTGGCCATGCTCCAGAGTACGCTCTATACCCTGGAGCACCAGCGGGTCTTCCATCTTCAGCTGATAAaccagctgcagcagcagctgtCGATAAACCCGCCCGCGGCTGGAGAAACCACGAGTACGGCAGCAGCGGCTCCTAAGGGAGACAGCAGCAAGGAGGCATCGCCGTCTCCGGTGACCCCGCTGATACACCCGAAACCTCTGTCCTCGCTGACGTCACCAGCACACTCGCGGCCCCCGAGCAGTCATCACCAGCTTCCGCAGCCGCCGTCACCGTCGACTACGCCCGCAGCCCAAGAGAGGCCGACCCCAGCCGGCAGCACGTCGCCCTTGAGCGCGGCCCCAGCCCCACCAACCGGACCCATGTCGGTGAGCAGCCCCCCGGCGACCGCTGCCCCGATGCCGCCGTCTCACCAGGTGCCCGCGCTCTGCTCGATCAGCTCGTCGCTGGCTAGTTCCATCATCACTAACAACGATCCGATGCCCCTGCACGAGCCTAACACCCTGGAGATGCTCCAGAAACGGGCCCAGGAGGTCTTGGACAACGCGAGCCAGGGTCTCCTGGCGAACAACCTCGCCGACGAGCTCGCTTTCCGGGGCAGCAAGTCTAGGCTCTCGCCCTACGATGGCAAGAGCGGCTCCGGAGGTCGCAGTGAGCCCTTCTTCAAGCACCGATGCCGGTACTGCGGTAAAGTCTTCGGCAGTGATTCTGCCCTGCAGATTCACATCAGGTCGCACACCGGTGAGCGGCCCTTCAAGTGCAACGTATGCGGGAGCCGGTTCACGACCAAGGGTAACCTCAAGGTCCACTTCCAGAGGCACAAGGACAAATTCCCCCACGTAAAGATGAACCCGAACCCGGTCCCCGAGCATCTGGACAAGTACCACCCGCCTCTGCTCCAGCAGTTGGCCGCGTGCGGACAACGACCCCCGCCGTCCCCGCCCCCACCTCAGATGCCCCCGCATCCATCGGGTCCGATGGGATTCTCCTCGCCACACCCTGGTGCATTTCTGCCGCCCCAGCCACCTCTACCCCTGGGCTTGAGCCTGCCCCCGGGCATGCCCATGTACCGCTCGCCCCTGCTGAACGCAGCTCCGGTACCGCCACCCCGGGAGGACCAAGACGGCCCCGCGGATCTAAGCAAGCCCCAGACGCCCTCGCACTCGGTGACCCACTCGCCGGCGCAGTCGCCCGGGGTCCAATCGAACTCTCATCATTCCTACAACGAGCATTGCCAAaaactgcagcagcagcagcagcagcagcaggacgAGATCGTCAAGCGGGAGCAGGAGCAGCACTCACCCCTCAGAGAGTACCAGCAGCCCCAGCTGCAGCCCCCCAGACCAAACAGCCGGGAAGAGGTCCGAATAACGCCCAAAAACGAGCCCGAGGACCCCGAAGACGTGATCGAGGACGAAGCCGAGGACTACGAGGACCCCTCGAGAAGGTTCACTAACTCGGCGTCGCCCACGTTGAACCCGGCAGCCGCGCTCCAGCAACAGATGTTCGAGGACTGTAGCATGGACAGCAAGGTCGACGAGCTCAACCGTATGGATCGGGATCCCGAGGACATGGAGCCCGACGATGACATGGACGACGACCAGCCCGAGAACCTCTCCAGCAGGGCGAACCCCGCCTCTATGCTCCAGCAGTCGATGCAGGTCTACCCCGGAGCCTCACCTGCGAGCAGCAGCGCGAGCAGCGGCAGCATGCAGACCTCCTTTGCTAACATCCTGTTCCCGGGACTGCCGCCCCACCACCCACAGCTGGCCTCCCACCTGGCTTCCCAGGGCGGGCCCAACCCGAATCCGTCCGCGGGACCACCCCCGGGCCCAGCGGATCTCATCGACCCGGCCAAGGACCCGGCGATCTATTCGAACCTGCTGCCCCGACCCGGGAGCAACGACAACTCCTGGGAGAGCCTCATCGAGATAACCAAGACCTCAGAGACGTCCAAGCTCCAGCAGCTGGTGGACAACATCGAGCACAAGCTGACTGACCCGAACCAGTGCATAATCTGCCAGCGTGTGCTCTCGTGCAAGAGCGCCCTCCAAATGCACTACCGCACCCACACCGGTGAGCGGCCCTTCAAGTGCCGGATCTGCAGCCGGGCCTTCACGACCAAGGGCAACCTCAAGACCCACATGGGCGTTCACAGGGCGAAGCCCCCCCTCAGACTGCTGCACCAGTGCACCGTCTGCCACAAGAAGTTCGCCAACTCGTTCGTCCTGCAGCAGCACGTGAACCTCCATACGAACGACCCCACAGAGCTTACGCCCGAGCAGATCCGGGCCCACGAGGTCCACGACTTCCCCCCAGGTGGGTACCCGCACCACCCCCTGGCGGCCCTTCTACCCGGGGGCTTCCCGCCTCTTCACCCGGCGGGCTTCCCCCTGGGTTTTCCCCCTACGGCCCGTCAGCACACCCTGGAGAGGCCGCCCTCGATGGACGGTAACGACGCAGACTCCAAGGACTCGctccagcaccagcagcagcagcacctcCAGCAGCTCTACCAGCAGCGCTTCAAGGAGGAGCAGGACGAGAtcgacgacgaggaggaggacCACCGGGAGGACGACGAGAGGTGTGACGATCGACCCGGAAGCCTTGGGGACCTCGACGAGGACAAGGACCAGGATCTCCAGgagcaccaccaccaccacaaaTCGCCCACGCCCCCTAAGTCGCCGCGGTACAACGGGGGTAGCGACAAGAGCAGCAGTCCACCGGCTGGGCCCGCCCCCCTGGACCTGACCCCCAGGGCGTCCTCGACCCCGGCGTCGACGGGCTCGCCGCCCCAGCAGCACCAcctccagcaccacccccagcaGCCACCCCACCCGTTCGGGGTGTTCGCGGGTCTGCTCCAGGCAGTCTCGCCCACGAACAGCAACGCGTCCTCGGCCGTCAGCCCCGGTCCCGGGGGCATGGGGCCCCTGGCCTCGCTGACGACGTCCGCCGTGAGGGCCGCGACCTCCAGCTACAACCCGCTCGGCCTAGCGGTTGGCGGCTCGTCAGTTCGCGGCACCACGTGCAACATCTGCTACAAAACGTTCGCGTGTCACTCGGCCCTGGAGATCCACTACCGGAGCCACACCAAGGAGCGGCCCTTCAAGTGCACGATATGCGACCGTGGATTCTCGACCAAGGAGGATGCGGAGAGTGGAGGAACAGGTGGAACAGGAACAGGAACAACCGGAGAGAAGTGCGACTGCGCTAAGCGCGCCCGTCGCAGCGCCCGCGAGAAGGCGCGCAGGAGACGTAAGGCCGAGGAGCGCCGCCATGGGCGGATGATGATGCTGCAGGCTGCGGCGGGGTCGGGGGCGGGAGGAGACGTGGGGCTTGAACAACGTGAACATTGTTTCGATAATAATAATCAGCCCACGGATCATGCTCGCATGCtcccaccaccaccaccaccaccgacGACCACCGGCGGCCACAGCATCCCCACGTCATCCGCCCTCGGACAGTTGCTCCCGGAGCCGCCCGTACTCCTGGGCAACATGAAGCAGCACATGCTGACGCACAAGATCCGGGACATGCCCCATCACCTCTTCGGTGGCGAGTCAAAACCTCCGTCGTCGAACTCGTCCTCGCAGCCGGGAACCCCGAGCTCTCAGCCGGCGCCCTCGATACCCACGCAGCCGATGCACGACCAGCGGGAGATGTCCAGGAGTCCGGCCTCGGCGGACGAGTCCAACGTCCCCGCGCCCTCGCTGCCCCCGATCCAGCAGTCCCAGGTGCCGGCTCCACCCCCGCCTCCACAGCAGCAGACCCAGCTCAGCTCGCCCCTGGACGGGCCCCTGAAGAAGGGCCTCGAGAACGAACTGCCCAGCGCGCCCAGGAACCGACAGCCCAGCATGTCGAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTTTCCTCGTCCTCGGCGCTCCAGATCCACATGAGAACACACACCGGAGACAAGCCGTTCCAGTGCACTATCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTCAAGGTACACATGGGAACCCACATGTGGGCCAATGGGGCGTCCCGTCGCGGTCGTCGAATGTCGCTGGACATACCGTCGCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAGCGAAGGCCGGACCTCTTCTACCCGTACCTACCCGCGCCCTTCCTTAATGGATTGCCCCAAAAACTGAACGAGATATCGGTGATCCAGGGCGCGGGCGGTGGACCAAACGGACTGCCCTTGCAGCCGACCGGACACCCTGGCAGCAAATACGCGGGCCTCTTCGGCTCGGTGTACTCGTCCGGGGGCGGCTTCATGCCTCCGGGCGGGGGTCACCAGCCGTCGCACCTCCACCACCAGGGCGGTCCAGGGCACCACCACCAcctccagcagcagcagcagcccctGGACATGCAGGGCAAGAGCCTCCTGTTCCAGACCACCACGAGCCCGGCTGGGTCGCCCGCTTACGGTGAGCACCGGAACTACGCCGACCGGGAGGAGCCCCGACCTGGATCCGCCGGGGTGGCTCCGCCCCGGGAGGGACTGGCCGCGTAG
Protein Sequence: MQLMRWSITRRLGSREDKQRREAARNCANSGEDNDSVSEGEESAVGGAIGEEAVDLTSARSHHEDELDERDPEDLPVPEDEDLDDQDEPEDFETAAAKITTGVKKLRQDVAGNEDDEEGSCKRMRLCQDAENNNSFVEGNATTPAPGFPPGATPGTSHVTLEALQNTSVAVAQFAATALGGGADSEAARQQLAMLQSTLYTLEHQRVFHLQLINQLQQQLSINPPAAGETTSTAAAAPKGDSSKEASPSPVTPLIHPKPLSSLTSPAHSRPPSSHHQLPQPPSPSTTPAAQERPTPAGSTSPLSAAPAPPTGPMSVSSPPATAAPMPPSHQVPALCSISSSLASSIITNNDPMPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGSKSRLSPYDGKSGSGGRSEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHKDKFPHVKMNPNPVPEHLDKYHPPLLQQLAACGQRPPPSPPPPQMPPHPSGPMGFSSPHPGAFLPPQPPLPLGLSLPPGMPMYRSPLLNAAPVPPPREDQDGPADLSKPQTPSHSVTHSPAQSPGVQSNSHHSYNEHCQKLQQQQQQQQDEIVKREQEQHSPLREYQQPQLQPPRPNSREEVRITPKNEPEDPEDVIEDEAEDYEDPSRRFTNSASPTLNPAAALQQQMFEDCSMDSKVDELNRMDRDPEDMEPDDDMDDDQPENLSSRANPASMLQQSMQVYPGASPASSSASSGSMQTSFANILFPGLPPHHPQLASHLASQGGPNPNPSAGPPPGPADLIDPAKDPAIYSNLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCIICQRVLSCKSALQMHYRTHTGERPFKCRICSRAFTTKGNLKTHMGVHRAKPPLRLLHQCTVCHKKFANSFVLQQHVNLHTNDPTELTPEQIRAHEVHDFPPGGYPHHPLAALLPGGFPPLHPAGFPLGFPPTARQHTLERPPSMDGNDADSKDSLQHQQQQHLQQLYQQRFKEEQDEIDDEEEDHREDDERCDDRPGSLGDLDEDKDQDLQEHHHHHKSPTPPKSPRYNGGSDKSSSPPAGPAPLDLTPRASSTPASTGSPPQQHHLQHHPQQPPHPFGVFAGLLQAVSPTNSNASSAVSPGPGGMGPLASLTTSAVRAATSSYNPLGLAVGGSSVRGTTCNICYKTFACHSALEIHYRSHTKERPFKCTICDRGFSTKEDAESGGTGGTGTGTTGEKCDCAKRARRSAREKARRRRKAEERRHGRMMMLQAAAGSGAGGDVGLEQREHCFDNNNQPTDHARMLPPPPPPPTTTGGHSIPTSSALGQLLPEPPVLLGNMKQHMLTHKIRDMPHHLFGGESKPPSSNSSSQPGTPSSQPAPSIPTQPMHDQREMSRSPASADESNVPAPSLPPIQQSQVPAPPPPPQQQTQLSSPLDGPLKKGLENELPSAPRNRQPSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFQCTICQKAFTTKGNLKVHMGTHMWANGASRRGRRMSLDIPSLPITPKDSEFLQRRPDLFYPYLPAPFLNGLPQKLNEISVIQGAGGGPNGLPLQPTGHPGSKYAGLFGSVYSSGGGFMPPGGGHQPSHLHHQGGPGHHHHLQQQQQPLDMQGKSLLFQTTTSPAGSPAYGEHRNYADREEPRPGSAGVAPPREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -