Basic Information

Insect: Encarsia formosa
Gene Symbol: -
Assembly: GCA_030522645.1
Location: JAPYYY010015447.1:1-3602[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00024 0.07 15.4 4.2 1 23 107 129 107 129 0.97

2 11 8.1e-06 0.0023 20.0 1.5 1 23 135 157 135 157 0.98

3 11 0.00012 0.034 16.3 3.6 1 23 163 186 163 186 0.95

4 11 0.0039 1.1 11.6 3.5 1 21 192 212 192 214 0.95

5 11 8.1e-05 0.023 16.9 1.9 1 23 220 242 220 242 0.99

6 11 5.3e-06 0.0015 20.6 0.3 1 23 248 270 248 270 0.98

7 11 0.00021 0.059 15.6 1.4 1 23 278 301 278 301 0.97

8 11 2.2e-05 0.0063 18.6 2.6 2 23 308 329 307 329 0.97

9 11 8.1e-05 0.023 16.9 0.3 1 23 335 357 335 357 0.99

10 11 0.0018 0.53 12.6 7.1 1 19 363 381 363 386 0.91

11 11 4e-08 1.1e-05 27.3 1.3 1 23 400 422 400 422 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00024	0.07	15.4	4.2	1	23	107	129	107	129	0.97
2	11	8.1e-06	0.0023	20.0	1.5	1	23	135	157	135	157	0.98
3	11	0.00012	0.034	16.3	3.6	1	23	163	186	163	186	0.95
4	11	0.0039	1.1	11.6	3.5	1	21	192	212	192	214	0.95
5	11	8.1e-05	0.023	16.9	1.9	1	23	220	242	220	242	0.99
6	11	5.3e-06	0.0015	20.6	0.3	1	23	248	270	248	270	0.98
7	11	0.00021	0.059	15.6	1.4	1	23	278	301	278	301	0.97
8	11	2.2e-05	0.0063	18.6	2.6	2	23	308	329	307	329	0.97
9	11	8.1e-05	0.023	16.9	0.3	1	23	335	357	335	357	0.99
10	11	0.0018	0.53	12.6	7.1	1	19	363	381	363	386	0.91
11	11	4e-08	1.1e-05	27.3	1.3	1	23	400	422	400	422	0.98

Sequence Information

Coding Sequence: atgGCACAAGGCTCAGAAAATCTTAGTAACCAAATGGTTCTTAACTCTGGGGACTCCTATCAAACGGTAACAATAGTACCTTCAGATTCAAATCCTGGTGAAGTGAGTTATGTTCTAATAGTTCAGCAACCTGATGGTgaaactaaaaatgaaaaaacagaaaatgaaaatgatgGTGAAGATGGGGAACAAGATCTTACAGTTTATGATTTTGAGGATAACGAAGACAACGAGCAAGCTGTAGAATCAGATGTTGAAGATGATAAAACCAAAATTGTTAAGTTTATACCAAAAAAATCACAGACTGTCACCCAAGCTCACATGTgcaattattgtaattatacaAGTGCCAAGCGATATCTGTTGTCTAGGCACATGAAATCTCATTCAGAGGAGCGGCCACATAAATGTAGCGTTTGTGAAAGAGGTTTCAAAACCCTTGCTTCATTGCAAAATCATGTGAACACACATACAGGGACCAAACCTCATCACTGTAAATATTGCGACAGTGCATTTACTACTTCAGgtGAATTAGTAAGGCACGTTCGATACAGACATACACATGAAAAACCACACAAATGTAATGAGTGTGATTATGCTTCTGTTGAATTGTCAAAACTAAAGAGACACATTAGATGTCACACTGGAGAACGGCCATAccaatgccCACATTGTACATATGCAAGTCCTGATACATTCAAGTTAAAACGTCACTTACGTATACATACTGGAGAAAAGCCTTACGAATGCGATATTTGTAACGCGAGATTTACGCAGTCTAATAGTTTGAAGGCTCATAAACTTGTTCATAATgttggCGATAAACCAGTGTTTCAATGTGAACTCTGTCCCACTACATGTGGTAGAAAAACAGATCTGCGTATACATGTACAAAAACTTCATACCTCAGACAAGCCCTTAAAATGTAAACGCTGTGGCAAAACTTTCCCTGAcaggtataGTTACAAACTTCATAGCAAAACACATGAAGGTGAAAAATGTTACAAATGTGATCTCTGTCCATATGCTTCAATATCAGCTCGGCATTTAGAGAGTCACATGCTTATCCACACAGATCAAAAACCTTATCAATGTGATCACTGTTATCAATCATTTAGACAAAAACAACTACTAAAAAGGCACTGTAATCTTTACCATAATCCTTCATACATTCCACCAGCTCcgcaagaaaaaaatcatcaatgtCCAGAGTGCGAAAAGCCATTTAGACACAAAGGGAATCTTATTCGTCATATGGCTGTTCACGACCCAGAATCTGCATTGCAAGAAAAACAACAAGCTCTCAAAATGGGTAGACAAaagaaaatacaaattattGATGGTCAGAGAGTAGAAGTCATGACAGGTGACACAGCTTTTAAACTTAAAGGTTATGctgatgatgaagatgaagaagaggaagaagaagaagaagaggaagaagatgaAGAGGACATGATGGCAGTTGAAGGAAGTGATGGACAACAGTATGTCGTTTTAGAAGTTATTCAACTACCTGATAATCAATCTTCAGATCAA
Protein Sequence: MAQGSENLSNQMVLNSGDSYQTVTIVPSDSNPGEVSYVLIVQQPDGETKNEKTENENDGEDGEQDLTVYDFEDNEDNEQAVESDVEDDKTKIVKFIPKKSQTVTQAHMCNYCNYTSAKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKYCDSAFTTSGELVRHVRYRHTHEKPHKCNECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICNARFTQSNSLKAHKLVHNVGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHCYQSFRQKQLLKRHCNLYHNPSYIPPAPQEKNHQCPECEKPFRHKGNLIRHMAVHDPESALQEKQQALKMGRQKKIQIIDGQRVEVMTGDTAFKLKGYADDEDEEEEEEEEEEEDEEDMMAVEGSDGQQYVVLEVIQLPDNQSSDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -