Basic Information

Insect: Encarsia formosa
Gene Symbol: -
Assembly: GCA_030522645.1
Location: JAPYYY010001502.1:25233-30139[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.8e-06 0.00081 21.4 1.4 1 23 147 169 147 169 0.98

2 15 6.1e-05 0.018 17.2 0.2 3 23 177 197 176 197 0.99

3 15 0.00057 0.16 14.2 0.1 1 23 279 301 279 301 0.98

4 15 0.16 47 6.5 0.1 2 23 309 331 308 331 0.94

5 15 0.00035 0.099 14.9 1.5 1 23 359 381 359 381 0.97

6 15 1.6 4.7e+02 3.3 0.0 1 23 396 418 396 418 0.86

7 15 0.043 12 8.3 0.3 2 23 426 448 426 448 0.95

8 15 0.084 24 7.4 1.7 5 19 459 473 456 477 0.90

9 15 0.00014 0.041 16.1 3.6 3 23 485 505 483 505 0.97

10 15 0.013 3.8 9.9 0.1 3 23 512 532 511 532 0.97

11 15 2.1e-06 0.0006 21.9 0.4 1 23 541 563 541 563 0.98

12 15 0.0034 0.97 11.8 0.2 3 23 571 591 569 591 0.97

13 15 0.003 0.86 11.9 0.2 3 23 599 619 597 620 0.94

14 15 0.0016 0.45 12.8 0.0 1 23 634 656 634 656 0.94

15 15 0.0016 0.47 12.7 0.0 1 20 1071 1090 1071 1093 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.8e-06	0.00081	21.4	1.4	1	23	147	169	147	169	0.98
2	15	6.1e-05	0.018	17.2	0.2	3	23	177	197	176	197	0.99
3	15	0.00057	0.16	14.2	0.1	1	23	279	301	279	301	0.98
4	15	0.16	47	6.5	0.1	2	23	309	331	308	331	0.94
5	15	0.00035	0.099	14.9	1.5	1	23	359	381	359	381	0.97
6	15	1.6	4.7e+02	3.3	0.0	1	23	396	418	396	418	0.86
7	15	0.043	12	8.3	0.3	2	23	426	448	426	448	0.95
8	15	0.084	24	7.4	1.7	5	19	459	473	456	477	0.90
9	15	0.00014	0.041	16.1	3.6	3	23	485	505	483	505	0.97
10	15	0.013	3.8	9.9	0.1	3	23	512	532	511	532	0.97
11	15	2.1e-06	0.0006	21.9	0.4	1	23	541	563	541	563	0.98
12	15	0.0034	0.97	11.8	0.2	3	23	571	591	569	591	0.97
13	15	0.003	0.86	11.9	0.2	3	23	599	619	597	620	0.94
14	15	0.0016	0.45	12.8	0.0	1	23	634	656	634	656	0.94
15	15	0.0016	0.47	12.7	0.0	1	20	1071	1090	1071	1093	0.94

Sequence Information

Coding Sequence: ATGGATGTTAGTAATGATCTTACCCTGCAATGGGTAGAAGAAGTTGGGAACGTTATTCACGAAGAAGTAATATGTGGCTTAGAAGCAGACCTGGATGCCCCGGTGGAGGAGGTAGTGGGAGCCTGCGAAGAAGTCACCGTGGAAGAAACTGTAGAATCTATGCCAGAAGATTCTACTCCTATGGCGGATACAGAGATACTAATGGTACCACAATCAACTGATATGGAATCCATTTACATTGTTCCACAAGATCAAGGCCATGACTACTTGAATATACAAGTAACAGAAGAAGTCATTACTGACAACTGGGATAGATCAGGACCAGATGATGGAATGGAAGTACCAGAAACTAAGGTCTCCCATGATAATTTACTTGAATATGATGATATGGAAATACCATTGCCAATCGATCAAGATTCTTACACAAATACAAGGCCATATCCTTGTGACTTTTGCAGTAAAAGATTTAGAAAGAAAGCAAATTTAATGAACCATATGGTGACCCATCAAACAGAACGACCACATGGCTGCAATTTATGTGGTGCTCGATATGTTAGAAAATCTGATTTAATGAACCACTTGAAAATTCATGCTTATGCTCCTACTCGAGATGGTTTAGAAGATGACTTAGAAGATCCATTAGCaactgaagaagaagaaaatcatCCTTCAAAGGGTCGTCGCAAAAAAGTGCAGACTAATGTTCCTAGAAAGCGCAAGTCAACACCTGGTGGTAGTAAACGCATAGAAGATGTAAAATTAGATATGAACAAaTGGGCTGAACAAATGCCTACAGGCGAACCTCGCTTTTCCGTTACAGATGCTTCAAAACCGTATGTTTGTCAATTTTGCGGTGTTGGATTTGCTCGAGAAAAAGCTTTAGCTTCACACTCTCGAATTCACGCAACAGGTGACAGTCCTTTGGAGTGCACATCTTGCGGTGAAATGTACTGGGATGTTAACTTATTGCGAGAGCATATGCGAGACAAGCATGGCTTTGTCCCTCAATCTGATCAAGAGGAACCTGAAAATGAAACATCAGCAACTTACGCTGGTGATGAAAGATTTGGTGAATACTTCTGCGATACCTGCGGAGTTCCATTCCACAGAATAGATCTTTTAAAAAGACACAGAAAGATTCATATAAAACACGAAATTGATACCATGGAGGGTTCAGGGCAACACCATGTTTGCAATGTTTGTGGTGAATGGTTTGAAGAAGCATTAGCATTATTAGCTCATGCTGAACTACATGCAAGCAGATCGCCAAGCAGGAGGTGTTTATTATGTGGCGAAAGGTGTCGAGACGACGCTGAACTTGCAGACCATGTTCGTGAAATGCATGCCGAAGATGCACCTCCAAATACGTGTATACTTTGTGGAAAAACTTGTAAAGACAAGAGAAGCTTATTAAAACATTCATGGATTCATAATACAGACAAAACATTTGGTTGTACCAAATGTGGAAAACGATTTCACAATAAAGCTAGATTACgaagACACATGGTGTCGCACCGTAATAAAATGGTGGCATGCGATGAGTGTGGTGAAGAATTTCCCGATGGCCGTGCCCTGGTTAGTCACCGGCACTCTCACAACAAAGAATTAGGTGGACGAACGTTCCCTTGCAAAGAATGCGGCAAAACTTTCGGCAGCCGTAGTTCGCAACAGATTCACATTCGGATTCATACCGGTGAAAGGCCGTACGGATGTCGGTTTTGTTGGAAAGCTTTTGCTGACGGTGGTACACTTAGAAAACACGAACGTATTCACACTGGAGAAAAACCATATGGGTGTGCCATATGCCCAAGGGCATTCAATCAAAgaGTTGTTTTACGAGAGCACGTAAGAGCTCATCATTCTGGTCCAGATCCCAAGTGCCACAACAGCTTATCTCCTTACCTTTGTAAAGTTTGTGGCGCTACCTTGTCTTCGTCGGATGAATTAGTTGCTCACATAGTGCAACATTGCGACGAGAACACCGCGATGCGACGTCAGCCACAATCAGGTCCTCGCAAGTACAAGCGCCGGCGCAAGTTGAAGCACGAGACGCCGACTTTTTCTGCTCGCATAAACGATTACGTTGACATGATTGACGGAATTACGGACTCTGATGAAAATATGAAACGCAAAGGTAGTAAGAAAACAAAACGTGCCAATGTTGAAGAAGGTTATCAAAATGTATTAAAGAGCTTTGAAAGCTCTCTACAAAACATCAACTCTATTGTTAGCAATAGCAAAACATATCCTTCAAAaacgaaaacaccaaaaaaaaagaagatcaaagaagaaaagaaagtcGGTGGCGTAAGCATGGCCGCAGTTTTTGATTTACCTGCTGTCAATCCCCCTGGCAGACCAAAGATGATACATACCCAAAAAACGCGAGTACCTGTAGAGATGGGAACTGATGGCGTTAAAAAAGGCCAGAAAACAAAAACATTGGTCACAAGAACTCCAAAAGTTATGCCAAACGATCAGCAGCAACCAACCGCCAGAGTTCAAAATATCATTACTGGCGGCGAGAGAAATAGACCTCGTACGAAAAATGTTAGTTATCACGTCGAAGGCAGACAACAATTTATACCTGCTACTTTTGCAAAGCCAAAAGAAATGGGGATGGAAACAGAGCCTCAAAGTATAGAAATGGTGAATATTAAAGTTGAACCTGGATTACTAAAATTGCCCATGCAATTTTCGACCAACAATAACGGCGATATCTTAAACCTCAAGCAAgaacaaattgaaaataaaccatCGCCAAAGAAACGAGGTCCCGTTAAAAAGACGAAAAGGCGACAAAGCGCTGTTGTGCGTAagccaaaagaaaaaatggGTCTGCTTGGTTCTGAAATTCCTATTACTAGTACAAGTGTCGACATGGAACAACAAGCGAATGAATCCCAACAAGAGGTGCAAGATGAGTCAACGCCGCCAACGCAGCCGATGTTTGACAGCAGCGTGGTTGATGGTAATAATCTTGAGGTTGCTTTTGAAGCTAACATTGTTTCTGAACATGAGGAAACAGTTCAAGAATCTATATTGCCCGATTTAGAAAAAGAAGCTAATCATGTCGATGAAATGGGCACTGGAAATGTGAAACTATCCGTGAAAGTTGAATCGACACCAGACGGTATACTTGACGTACACAGCTTGATTGGTTCGGTAGAAGAGTCGGTGCCAGAAACTATTATACCGGATACTCTCGAGTACACTTGTGAGATGTGTTCCGCAGTATTCTCAACGCGTGCTGAATTGCTGGTTCATGTGCCGATACACATTTGA
Protein Sequence: MDVSNDLTLQWVEEVGNVIHEEVICGLEADLDAPVEEVVGACEEVTVEETVESMPEDSTPMADTEILMVPQSTDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGMEVPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSKRFRKKANLMNHMVTHQTERPHGCNLCGARYVRKSDLMNHLKIHAYAPTRDGLEDDLEDPLATEEEENHPSKGRRKKVQTNVPRKRKSTPGGSKRIEDVKLDMNKWAEQMPTGEPRFSVTDASKPYVCQFCGVGFAREKALASHSRIHATGDSPLECTSCGEMYWDVNLLREHMRDKHGFVPQSDQEEPENETSATYAGDERFGEYFCDTCGVPFHRIDLLKRHRKIHIKHEIDTMEGSGQHHVCNVCGEWFEEALALLAHAELHASRSPSRRCLLCGERCRDDAELADHVREMHAEDAPPNTCILCGKTCKDKRSLLKHSWIHNTDKTFGCTKCGKRFHNKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRTFPCKECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHNSLSPYLCKVCGATLSSSDELVAHIVQHCDENTAMRRQPQSGPRKYKRRRKLKHETPTFSARINDYVDMIDGITDSDENMKRKGSKKTKRANVEEGYQNVLKSFESSLQNINSIVSNSKTYPSKTKTPKKKKIKEEKKVGGVSMAAVFDLPAVNPPGRPKMIHTQKTRVPVEMGTDGVKKGQKTKTLVTRTPKVMPNDQQQPTARVQNIITGGERNRPRTKNVSYHVEGRQQFIPATFAKPKEMGMETEPQSIEMVNIKVEPGLLKLPMQFSTNNNGDILNLKQEQIENKPSPKKRGPVKKTKRRQSAVVRKPKEKMGLLGSEIPITSTSVDMEQQANESQQEVQDESTPPTQPMFDSSVVDGNNLEVAFEANIVSEHEETVQESILPDLEKEANHVDEMGTGNVKLSVKVESTPDGILDVHSLIGSVEESVPETIIPDTLEYTCEMCSAVFSTRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01219230;
90% Identity: -
80% Identity: -