Efor009664.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- -
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010002571.1:1-9494[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 6e-06 0.0017 20.4 1.0 1 23 167 189 167 189 0.98 2 30 0.0037 1.1 11.7 2.0 1 23 212 235 212 235 0.96 3 30 0.0099 2.8 10.3 1.0 2 23 242 264 241 264 0.96 4 30 0.00089 0.26 13.6 0.5 1 21 283 303 283 304 0.95 5 30 0.37 1e+02 5.4 1.4 7 23 382 399 382 399 0.94 6 30 0.00011 0.032 16.4 0.1 1 23 465 488 465 488 0.96 7 30 0.02 5.8 9.3 0.4 1 23 494 517 494 517 0.96 8 30 0.069 20 7.6 2.3 1 23 530 552 530 552 0.98 9 30 0.00016 0.046 15.9 0.9 3 23 600 621 598 621 0.96 10 30 1.8 5.1e+02 3.2 0.7 2 23 681 704 680 704 0.92 11 30 3 8.5e+02 2.5 0.0 2 23 713 735 713 735 0.84 12 30 0.089 26 7.3 0.0 2 23 742 764 741 764 0.93 13 30 1.2e-05 0.0036 19.4 1.2 1 23 772 794 772 794 0.98 14 30 0.5 1.4e+02 4.9 1.1 2 23 848 871 847 871 0.94 15 30 0.0002 0.057 15.6 3.3 1 23 874 897 874 897 0.97 16 30 0.00063 0.18 14.1 0.5 2 23 904 926 903 926 0.95 17 30 7.7e-05 0.022 16.9 2.6 1 21 962 982 962 983 0.94 18 30 0.0029 0.83 12.0 2.1 2 23 997 1018 996 1019 0.93 19 30 0.14 41 6.7 2.7 1 23 1022 1044 1022 1045 0.95 20 30 0.0054 1.5 11.1 0.8 2 23 1052 1075 1051 1075 0.94 21 30 0.83 2.4e+02 4.2 0.2 2 23 1083 1105 1083 1105 0.95 22 30 3.5 9.9e+02 2.3 0.0 2 23 1112 1134 1111 1134 0.87 23 30 0.22 62 6.1 2.7 2 23 1143 1165 1143 1165 0.96 24 30 0.11 30 7.1 0.2 2 23 1171 1193 1171 1193 0.92 25 30 0.017 4.9 9.6 0.1 1 23 1269 1292 1269 1292 0.96 26 30 0.09 26 7.3 1.5 1 19 1320 1338 1320 1340 0.91 27 30 0.13 37 6.8 1.2 2 23 1448 1470 1447 1470 0.94 28 30 0.048 14 8.1 1.0 2 23 1477 1499 1476 1499 0.96 29 30 0.29 83 5.7 1.8 1 23 1510 1532 1510 1532 0.97 30 30 1.3 3.7e+02 3.6 0.0 2 20 1538 1556 1537 1558 0.91
Sequence Information
- Coding Sequence
- ATCGCGGAGGATGACAGATTGCCGAACTTCCTTTGCTACAAGTGCATGTACAATTTGGAGAGCTTCTGGGATTTCAGGGTGGCCTGTCTGAACGCTCGCAGCAAGCTCGAGAAATGTCTCGATAACGAGGACGGACAGTTTGCAGATGATCAGaaaCCAGAAATTAAACAGGAGGGCGACGATGGCGAGCCGTACTCGGAGCTCCGTATGGAGTTGCTCAAAGAGCAGAAGGACAGAATGCTCATGCCCGAGGTGGTTCCGGTTGTGAATCCAAACGCAGCTCTGGGAACACCGCCACCGCTGAGGTCGTCGGACGGCGAGATACACGAACCACCGGACGAACaaatgGACGACCCAGACATGTACGAAATGGACATGGAAACAAATCCTAGCGACTTTCTGGAAATGAACACAATGGAGGAGCCGACAAACTCCAACCTACCCCAGCCTTCCCCCCAGGAAGGCACTTTCCAGCACAAGGACGAGCAGCACGAGGTTTACGTGTGCTCCCTGTGCAACAAGGCCTTCAGCTCCAAGGGCCACCTCTCCCTGCACGCCCGCATACACGCAGGGGCAGGAGGCGTCATCGGGGAGAAGGTCATAACCAACGATCACACCTCGTACAGCAGACCCTACAGATGCGACCTATGCAACAAGTCGTACTCCACGGCCAAGCATCGATGGGGACACGTGTCCACCTCGCACAGGGGACATCCGGCTGTTACGTGCAGGTTCTGTTCTCGCATCTACTCGACGCGTAAAAACCTCGGCGAGCACATACAGTCCCGTCACGACGGCCTTCAACCGCCGCCGGAGAGCCCGGGACAGTACGTACAGGACAACCGCTTCCAGTGCAAGTCCTGTCCCAAGATGTACACCAACGTCACGGATCTCAACAAGCACAGCCGAGTCTGTCAAAAGGAGCAGCAGAGGCTCAGTGGATTCTCCAAACTAAAAAGTGCCCTAGAAAACTCGGACATGTCGAGCGTAGACTCGGACTACGAGCACAAAGATTACAGAAGTGCCGAGGCCAAGCTCGCCAAAAACCCCCAGCTTACCATTCTCAAGCAGGCTTTGACCAAGGGCGAGAAGGGCGTCAAAAAGGAGTACGAGAAGATGCTGAACAAAgctaaaaagcaaaaaaacaaaCACTTCGTGGTTAAGTCCTCACTGAGCAGGCATATTTTGACCTTCCACGGAGTCGATCCCACCCCTATGATCGACAGTGACAAGTGCCTGAAAAAATCTCGAAACGAGTCGGATCTTATGACTCCCATTAAACAGGAGCATACCAAAGAAAACTCCGATTCACCCTACTCATGCGATAACATGGACAACGACGAAGACGAGCCGGAGAACGGTAACGACAACGCTCTCGAGGTCGAGACGGTATTCGTGTGCGAGATATGCACCCGCGACTTCAACGACCGAGCGTCCCTGTGGTTGCACATACGCGCCACGCACAAGGAATACGCGGCCTTCGCTTGCGGCATATGCCTGAAGATATGCGAGAACAACGCGCAGCTGCTGAGCCACGTCAACATGTACCATGGCGGCTCGAAGCTCCTGATGTCCGAGCAAAGGAGGTACAGCTGCACGATATGCGGCAGGCAACACGACTCGAGGAAGAAGCTTATGACACACGTCAAGATTCACAATCTCGATCCCAACTACGACCCCTCGAACTTCGTCCAACTCAACGCTAACTACTACACCGAGAGCGTGAACAGTACTAACGACGGAGGTGGCGGAAATGAGCTCATCATGGACATTGACGACGACACCGAGAAGATGGACTGCTACGTGTGCCACAAGATCTTCCCGAGCGAAGACCAGTTGGTCAGGCATCAAAGGAATTCGCACAAGATCGAACAGGCCAGCGACGTTGGAAGCAACGGCCGAAGCACACCCCAAAACGGAACCGGAAACAGAGCGCAGTACCATCTGTTCTACGTGTGCGAGCTTTGCGGAAGCTCGCATCCCAGCAAGTGGGAACGGTGGCTGCACGTCAGCAGCATACACAGCAACGAGCCTTCCATCACGTGCGAAAGGGAAGACTGTGCCAAGATATTCGCCACGAAGAACCTCAAGAACGAGCACGCACAACACCACTCGATTCAGGGCGAGTCACCAAACACGTGCGAGATATGCGGCAAGCTCTGGGGAAGTCGGGTCGACTACTGGAAGCACGTTATGGGAGTTCACTCCGACACTGTGCCCCTCATCTGCGGGGTTTGTCTGAAGGTTTTCCCGGACGTGATCCAGCTCAGCCAGCACGTCAAGCTCAAGCATTGGCCCCTCACAAACGGAGACTTCAGCTGCGATATTTGCGGAAGACCGTACTCCAACAAGAGCAAAATGTCCAGGCACAGGAAGATTCACGGACTTGACGGCGAGGCTTTCAATCCAAACGTCACGAATGACAGTTTGGTCATGCAGGAAGCGTGCATGAACGACGTTTCTAgTCTTCCGCCAATACCCATACACCTAGAGAACGGGTTTTCAACACCCACCGAGTCTATGCCAGTCGACGTATCCCTGGTCTGCGAGATGTGCAACGGTCTCAAGTTTGAGAGCTACGAGGAGTTCTGCAGTCACCGTCGCACAGCCCACAGTCAGTTCCCGTGCGACCTCTGCAACAAGTGCTACGGTCGCACGTCCCACCTGTGGAAGCACGTCAACAGGGTGCACAAGGGACACGCCGACGTCACATGCAGGTACTGCAACAAGACCAGCGCCTCCAGGGAACACCTCGCCGCTCACATTGCCAAGATACACAGGTACGAGCCCGACGTCAAGCTCGCTGGAGACATCATGGAGGTCGGGTACAAGAACAACTATTTGCACCAGGCAGACGCCAACGCTGAGGAGGAGGGTGGCATACACTTCTGCGAAAAGTGCAACAAACCGTTCAACAAGAAATACCTGCTTCGTCGTCACATGAAGGGCTGTCAGAACTACCGCAAAGACCCCGGTGCCCTTCTCACGCGTTGCCGAGCTTGCGAGCGCATATTCAAGGACCGCGCGAGTCTGAAGAAGCACATCGAGAACCACCACAGCTCGTACGAGTGTCACCTGTGCAACGAAACCGTGACCTCGAAGCTCGGCATAATGACCCACAACCGAATGCATCACATGCACCACCCGGACCTGACTTGCGAGCTCGAGAACTGCCGCAAGCTCTTCAGGACGAAGGAGGACCTCGAGTCCCACCGTAAGGAGCACAAGCACCACGGCAGCCCGAACGTATGCGATTTCTGCGGCGACTCCGTGGAGAACAAACTCAAGCTCAAGATGCACATACTCAGCTTGCACCGGAACGAAATCGGAGTATCGTGCGGCGTATGCCTGATACCCATGAAAGATCCCAAGGATCTCAAGAAGCACGTAGAGGACGTGCACGAGAACGTACTGAATAAACCCAATACTTGCCAGGTCTGCGGAAAGCAGTACGCCTCGAAATGGAAAGCATTCGACCACACTAAAAAGTGCCACGGCAAAGTTTTTCGTACATGCAAGCAGTGCCTTGCCGTCTTCACCTCCGAGGAAGACCTCCGTGGTCACTACACCCAGGTCCACAACATTCCTAAGGACCAGCTCGACGCGTACCTGTATAGGCTCGAGGTCAGCGGAAAGAAGATGGAAGGTGGTGGTAGTGGTGGTGGCTACACCCCGGGTTCGCTCGAGGTTGTCGTCAAGGAAGAACAAGAAGAGCTAGACTTCGACTTAGACAACCCCTTTGATGACGACCTGGATAACGGAGGCTCGAACGACTCGAAGCGCCGTCGCTCGCCCACCGATACCTACGACTGCGAGATATGCCCAGAGATATTCCTGAACAACGAGCTCCTTTCCTCGCACTACCGGAACGTTCACAACACCGAGCCCGTGCACCTCTACAAGAAGATGAAAGTCGATACACCGACGTCCAAGAAGAAGATGCGCGACCGGGAGAATTACGAGTGCGGAAACTGTCAGAAGCAGTTCTGCACCAAGACTCTGTACCTGGGCCACGTAGATGCGTGCACGGTTCACCGCAAGAGCAACGTCGCTCCCCCCACGTCTATCCTAGAGGCACACCTTAAAAGCGGTGGCGTCAGGCTCCGGCACGAGGACGAAGACCAGGAACATCACCAGGCACCCGATCTCTGCGAGACAAGCTCGCTCAACATTCCTGACTTCAACCTCTTCGAAGAGATAAACATGCAAGTCACTGGACACAAACCCGTACCTAGTCTCATGCCTCTGTCGGGTGGTGGCAGCGCCTCGAAGATGGGCTCGGCTAAGTACTCCAGAAAGGACTCCCGCAAGGTCTACGACGAGACTACCAACACCGAGTGTACCTGCGAGGTGTGCGGCAAACCATGGCCGGCCAAAAAGCACCTCTGGCAGCACTTGATACGCTTCCACAGATCCGAAGCCGCAGTTACCTGTGGGGTGTGTTTGAAGCACTGCATTACTTATGACGGACTCGCCTCGCATCTCAGGTCAGCCCACCCAGCCATAATGTCGGCCACGGGCAACAACTTCACCTGCAAGGTGTGCGGCAGGTACCACAACGCCCGCAGCAAACTGCTCCTGCACATGAGCATACACATAAACTACAACCTGATGTGCGGACTTTGCAACGTGTACTTCGACACCGAGGAGAAGCTTAACGAGCACGCGGCCACCTGCACGAGCGTCAAAGAAGAGATCCCCGCTGTCGAGGCGAGCGTGGAGGGTGAGgtagaagaggaagaagaggaggaggaagaggaagagCAGGAGATGGACATCAAGGACGAGTTGATCGACGAGGGAGAGAAAGGAAGCCTGATCGGGGACGCTGAGGAGGGCGAGGGAGAGAATAACACGGATTCGTCGAACGATGACGACTCCGACAGCAGCTCGTCGAGCAGCACCAGCGGTAGCGGTAGCAGCAGCTCTAGCGACGACAGCAGCAGCGACGAGGACGAGGAGGTCAGCCCCAAGGTTGAGCCCGTTATCAAGGACGAGGAGGCGAGCCAAGACGACCAGGAGGAGGGCTCACCGGCACTGAGCCCCATGCTCGGCGCTAACGAAGTCAAAGACGGGGAAGCTGAGGACAGCGAAGAGGAGGACGACGAGGTAGAGCAGGTGGCCGAGGTTGTAGACCCCAGCGCAGAGTTCCAAAACGATGACAACTCCCCCAGCAGCAAcgaagatgaagaagaggaggaggaggaagatgaAGGTGAAGAGGAAAATAAAGAGGAGGCGGAAGAGGTGGAGGAGGCGGAGGAGGAACAGCAAGAGGAAGAAGACGTAGATGGCGAGGTGGAAGAGGAAGTAGTTGAACAAGAGTACCAGGAGCAGGAAAATGAAGACGAGGAAGAGGAAATGGACGAGGGTGACATGCAGAACCTCAATGGTACCGTTCTCATGCTGACGAACGACGAGGACGGCAACCAGATACTCATTGAGCGGAACATGGCCGACCTCGAGAACGATGACTCGGTTCATGACATGGCCCGGTACGTGTTCCAGGACGGCAGTGGTTTTGCCCTCGAAGACTACGAAGGCATCGTCGAGGGCGGAAACGAGGAGGAAgcggaagaggaggaggaggaagaagaagactGCCGTGGGTTCGAGATGGAGATTAACGCAGCGAACAACGGCCAGGAAGACGAAGACGATGTTGGGGACGACGAGGAGGAAGCGAGCAGTGCCAAAAGTTGA
- Protein Sequence
- IAEDDRLPNFLCYKCMYNLESFWDFRVACLNARSKLEKCLDNEDGQFADDQKPEIKQEGDDGEPYSELRMELLKEQKDRMLMPEVVPVVNPNAALGTPPPLRSSDGEIHEPPDEQMDDPDMYEMDMETNPSDFLEMNTMEEPTNSNLPQPSPQEGTFQHKDEQHEVYVCSLCNKAFSSKGHLSLHARIHAGAGGVIGEKVITNDHTSYSRPYRCDLCNKSYSTAKHRWGHVSTSHRGHPAVTCRFCSRIYSTRKNLGEHIQSRHDGLQPPPESPGQYVQDNRFQCKSCPKMYTNVTDLNKHSRVCQKEQQRLSGFSKLKSALENSDMSSVDSDYEHKDYRSAEAKLAKNPQLTILKQALTKGEKGVKKEYEKMLNKAKKQKNKHFVVKSSLSRHILTFHGVDPTPMIDSDKCLKKSRNESDLMTPIKQEHTKENSDSPYSCDNMDNDEDEPENGNDNALEVETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGICLKICENNAQLLSHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLMTHVKIHNLDPNYDPSNFVQLNANYYTESVNSTNDGGGGNELIMDIDDDTEKMDCYVCHKIFPSEDQLVRHQRNSHKIEQASDVGSNGRSTPQNGTGNRAQYHLFYVCELCGSSHPSKWERWLHVSSIHSNEPSITCEREDCAKIFATKNLKNEHAQHHSIQGESPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEAFNPNVTNDSLVMQEACMNDVSSLPPIPIHLENGFSTPTESMPVDVSLVCEMCNGLKFESYEEFCSHRRTAHSQFPCDLCNKCYGRTSHLWKHVNRVHKGHADVTCRYCNKTSASREHLAAHIAKIHRYEPDVKLAGDIMEVGYKNNYLHQADANAEEEGGIHFCEKCNKPFNKKYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLKKHIENHHSSYECHLCNETVTSKLGIMTHNRMHHMHHPDLTCELENCRKLFRTKEDLESHRKEHKHHGSPNVCDFCGDSVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHENVLNKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSEEDLRGHYTQVHNIPKDQLDAYLYRLEVSGKKMEGGGSGGGYTPGSLEVVVKEEQEELDFDLDNPFDDDLDNGGSNDSKRRRSPTDTYDCEICPEIFLNNELLSSHYRNVHNTEPVHLYKKMKVDTPTSKKKMRDRENYECGNCQKQFCTKTLYLGHVDACTVHRKSNVAPPTSILEAHLKSGGVRLRHEDEDQEHHQAPDLCETSSLNIPDFNLFEEINMQVTGHKPVPSLMPLSGGGSASKMGSAKYSRKDSRKVYDETTNTECTCEVCGKPWPAKKHLWQHLIRFHRSEAAVTCGVCLKHCITYDGLASHLRSAHPAIMSATGNNFTCKVCGRYHNARSKLLLHMSIHINYNLMCGLCNVYFDTEEKLNEHAATCTSVKEEIPAVEASVEGEVEEEEEEEEEEEQEMDIKDELIDEGEKGSLIGDAEEGEGENNTDSSNDDDSDSSSSSSTSGSGSSSSSDDSSSDEDEEVSPKVEPVIKDEEASQDDQEEGSPALSPMLGANEVKDGEAEDSEEEDDEVEQVAEVVDPSAEFQNDDNSPSSNEDEEEEEEEDEGEEENKEEAEEVEEAEEEQQEEEDVDGEVEEEVVEQEYQEQENEDEEEEMDEGDMQNLNGTVLMLTNDEDGNQILIERNMADLENDDSVHDMARYVFQDGSGFALEDYEGIVEGGNEEEAEEEEEEEEDCRGFEMEINAANNGQEDEDDVGDDEEEASSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -