Basic Information

Insect: Encarsia formosa
Gene Symbol: -
Assembly: GCA_030522645.1
Location: JAPYYY010000135.1:58908-63461[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.076 22 7.5 1.7 1 23 239 261 239 261 0.98

2 16 0.024 7 9.1 0.6 2 23 295 316 294 316 0.97

3 16 1.7e-05 0.005 19.0 2.5 2 23 398 420 397 420 0.95

4 16 0.0027 0.76 12.1 0.3 1 21 424 444 424 448 0.92

5 16 1.3e-05 0.0037 19.4 1.0 2 23 526 547 525 547 0.96

6 16 2.4e-05 0.007 18.5 1.7 1 23 588 610 588 610 0.97

7 16 0.00072 0.2 13.9 1.3 1 20 615 634 615 636 0.94

8 16 0.082 23 7.4 2.1 2 23 647 668 647 668 0.97

9 16 1.9e-05 0.0056 18.8 0.7 3 23 707 727 705 727 0.96

10 16 4.8e-05 0.014 17.6 1.7 1 23 732 754 732 754 0.95

11 16 2e-05 0.0057 18.8 1.0 1 23 760 782 760 782 0.99

12 16 1.1e-05 0.0031 19.6 0.5 1 23 802 824 802 824 0.95

13 16 7.5e-07 0.00022 23.3 1.1 1 23 830 852 830 852 0.98

14 16 1.8e-05 0.0051 18.9 0.2 1 23 858 880 858 880 0.98

15 16 0.00044 0.13 14.5 6.2 1 23 886 908 886 908 0.96

16 16 0.0098 2.8 10.3 0.5 1 20 914 933 914 935 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.076	22	7.5	1.7	1	23	239	261	239	261	0.98
2	16	0.024	7	9.1	0.6	2	23	295	316	294	316	0.97
3	16	1.7e-05	0.005	19.0	2.5	2	23	398	420	397	420	0.95
4	16	0.0027	0.76	12.1	0.3	1	21	424	444	424	448	0.92
5	16	1.3e-05	0.0037	19.4	1.0	2	23	526	547	525	547	0.96
6	16	2.4e-05	0.007	18.5	1.7	1	23	588	610	588	610	0.97
7	16	0.00072	0.2	13.9	1.3	1	20	615	634	615	636	0.94
8	16	0.082	23	7.4	2.1	2	23	647	668	647	668	0.97
9	16	1.9e-05	0.0056	18.8	0.7	3	23	707	727	705	727	0.96
10	16	4.8e-05	0.014	17.6	1.7	1	23	732	754	732	754	0.95
11	16	2e-05	0.0057	18.8	1.0	1	23	760	782	760	782	0.99
12	16	1.1e-05	0.0031	19.6	0.5	1	23	802	824	802	824	0.95
13	16	7.5e-07	0.00022	23.3	1.1	1	23	830	852	830	852	0.98
14	16	1.8e-05	0.0051	18.9	0.2	1	23	858	880	858	880	0.98
15	16	0.00044	0.13	14.5	6.2	1	23	886	908	886	908	0.96
16	16	0.0098	2.8	10.3	0.5	1	20	914	933	914	935	0.89

Sequence Information

Coding Sequence: ATGGAGGAGCTCGTAGAGTCGGCGGCTCGCACCGTCGTCGAGGATTCAACTATCCAGGGTACTTCGGAACTCGTCTGCAGGATATGCCTTCGGACCGGCCCCGCTCAAGATGCTCTGGATCTGTTTCACCGGGACCCGCCCGACTCGCCGGACCTAGCGCAAAAGACCATGACTTTTGCTTCGGTTGAGATTGCACCAGGTGACGGTTTGCCCTCCCAGTTGTGCCGTAATTGTTCAGATAGGGTTGAGGTTGCGTACAATTTCAAGCTTGAGGTCGAGCAAGCTGACTGTTTTTTGAGACAGAAAAAACTGTCTGATAAACAGGAGGAAGTACAGCAGTTATTCAGTGTACACGGTTgtgaaaaaaacaatcaaaatgaAGAAGTTAAGATTGAAAGTGCAGAACATGATGTAGAGAAGCAGGAACAACTGCAGGATGTTGCAATGACTGAACTGTGCGATGAATCCAAAGATCAGCAGATGGATGAATCAACATTTATTTCTGGTGACATTGAAGCTCAGGATTCAGAgGAAACACCAGAAGAACCTAAGGATGAGCCAGCAGCTATCAATAAAGACAAAACAGTTGATACTAATCCTGCACCTGGACAGACTGATAAAGATGTCAACGAGGAAAACTACTTTGAAAATCTTAACCTCAGTTCTACTTTAGGTAAACCACCAAAGTCTGAAAACAGCtcagaaaaagtttattttgtgtGCTATCTGTGCGATCAGCAGTTTTTGTCAAGGGATGTTCTCAAAGAACACATGCACTCCCATGATGAGGTCAAGCAGACCTTGAAAACACCGGAAAAGTCCCAAAGTATGGATGTGGatgcaaatgaaaaaacaactcCATCCAGCGGTAAGAAGCCAAACAAGTGTCCTCAGTGCGGCAAAGAGTACCTGTACATAATATCATACAATAAACACATGAAGCAGCACgagaaagaagaagagaagaagaaggaggatcAGAGTGAAGCGAGTCAGGTACCACTTGAAGTTTCCTTTCAAGAGGATGACTATTCCCTGGATTTTCAGGACTTCAAGGATTCACACAGTGATGATGATACTAATGAAAATAATCCTCAGGAGTTTGATACTAAAGATGATGAAAAAGACAAAGCTGGTggtgaaaccATCAAGATCGAAGCACCACGTCCAAAGCCAGGAAAGAGAGAGCTCAAGTGTCCGGAGTGTTCCCTAAAGTTCACCCACAAGAAGAACCTCTCCCGTCACATAGAGTCCAGTCACCGTAAACGCTTCAAGTGCTCAGAGTGCGCCAAGAGCTTCGGGAACGAGCTAACCCTGAGGAACCACCTGATAGCCACCAACCACAAAACCACTCTGCACGGGGAGGAATACGACCCGAACAAGAGAATCAAGAGGTCGGCCGCCAGGGCTGCCCAGAAGATTATCGACCAGATCAGAACCGAGGATTACGACGAGGAGGACGAGGTCGAGGATGGAAATGACGTGGATTTCGTTGACGTCAAAGAGGAGTTCTTTGACTGCAGCGACGACACCCGGAAGGAAAACTCGACGTCCAAGAGCTCAAAGACCGGTCTAAAATGCGAGACCTGCGACCTCAAATTCTCCTCGAAGCAAGCCCTTACCAGGCACATGGAGCAGCACGTCAAGGACGAGGAGTCCACCAAGATTCCCACTCCCACCACCGTCCAAGAGGACTGCGATGACGAGGACGAGGACGACGACAACTTCACGGGTGGCCTGGGCGACTGGCCCACCGAGACTTTCGAGTGTCCTACCTGCCTTAAGCGCTACAGCACCAAAAAGTCCCTGATGCGACACCAGCTCCTGCATGAGGAGCCGCACTTCGAGTGCGACATTTGCAACGTCAAGTTCCACCGCAAGGACAAGCTCAAGGCCCACTACGACAAGTGCTCGGAGAAGAACCCCGAGCAGGTGAGGAAGTGCAACATATGCGGCGACTGCTTCGAGAACAACGAGATACTCAAGGAGCACAGGTCGAAGCACGTCACCGAGGGGATACTCACCGAGGAGGATCTCAGGGAGACGGAACCCGGCTTGGAGGACAAGAGCGAGGACAGAGCCCCGAGGAAGAGGCGCACGGATATCGTGGGACTCGACTGCACCGAGTGCAACAAGCGCTACACGTCCAGGAAGGGACTCCTCAGACATATACAGGTTCACGAGGGTAAAAAGTACTTGTGCGACATATGCCCGAAGAAGTTCTTCCGACGCGAACACCTCAAAATTCACGTGGCCAAGCACAACATAACCAAGCCTTACAAGTGTCCAAAGTGTCCCAAGCGTTTCATCAAGGAAGAGCAAGTGAACACCCACCTCCAGAAGCACGATAGAAGTCACTCGAAAAAACCCAAGGATCAGTCGAATCAGGACACGTCCAAAAGATTTCTCTGCGAAGTGTGCTCCAAGAGCTTCACCCAGTCGACCACTCTCTTGGCCCACTTGCGGGCCCACAACGGGATAAAACCCTTCGCCTGCAAGGTGTGCACCAGGCCCTTCACCACAAACGCCTACCTGAAGATGCACATGAGGACCCACACCCAGGAACGGCCCTACGTGTGTCAGTACTGCTCGAGGGCGTTCGCGAGGGCCGACACCCTGGCCAACCACCTCACCTCGCACACGGGGGAGGCCAAGTACCACTGCAAGTACTGCCCCAAGCACTTCAGGAGACTCAAGAGCTTGAAGGAACACGTCTTCATACACACGGGGCAGAAACCCTACGCGTGTCCTACATGTGACAGAAAATTCAACAACAACGGCAGCAGgtACGCCCACAGTAAGAGGTGCAAGCAAAACTTGCAGGCACAGGTTACGTTACAGCACATATCCGCTGAAGAGATTCAAGAGCATTCGATACAAAACGACTCCGGCCAAATAGAAATCCATGAACAGCCACAGATGGAGATACAAAGTCAGAGGATATCGCTACCCACGACCAGTCAGCAGGGTGCTAAACAGCAGAACAACATAAAGACTATAACTATAGCGGCGAGGAATCCCGAGGGTGGCTTCAACCAGCACCACATAATGGCCTCGCACCAGGAAATCCTGATGCCGCTTCTGCTCCCCCTGACCATGGTCGAGCCCATGCCCTTGACGGTCACCCTGGCCGACGTAGGCGAGGAGGTCATACTGCCCGAGGGCACTAAGATATTCACGTCCTAA
Protein Sequence: MEELVESAARTVVEDSTIQGTSELVCRICLRTGPAQDALDLFHRDPPDSPDLAQKTMTFASVEIAPGDGLPSQLCRNCSDRVEVAYNFKLEVEQADCFLRQKKLSDKQEEVQQLFSVHGCEKNNQNEEVKIESAEHDVEKQEQLQDVAMTELCDESKDQQMDESTFISGDIEAQDSEETPEEPKDEPAAINKDKTVDTNPAPGQTDKDVNEENYFENLNLSSTLGKPPKSENSSEKVYFVCYLCDQQFLSRDVLKEHMHSHDEVKQTLKTPEKSQSMDVDANEKTTPSSGKKPNKCPQCGKEYLYIISYNKHMKQHEKEEEKKKEDQSEASQVPLEVSFQEDDYSLDFQDFKDSHSDDDTNENNPQEFDTKDDEKDKAGGETIKIEAPRPKPGKRELKCPECSLKFTHKKNLSRHIESSHRKRFKCSECAKSFGNELTLRNHLIATNHKTTLHGEEYDPNKRIKRSAARAAQKIIDQIRTEDYDEEDEVEDGNDVDFVDVKEEFFDCSDDTRKENSTSKSSKTGLKCETCDLKFSSKQALTRHMEQHVKDEESTKIPTPTTVQEDCDDEDEDDDNFTGGLGDWPTETFECPTCLKRYSTKKSLMRHQLLHEEPHFECDICNVKFHRKDKLKAHYDKCSEKNPEQVRKCNICGDCFENNEILKEHRSKHVTEGILTEEDLRETEPGLEDKSEDRAPRKRRTDIVGLDCTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFFRREHLKIHVAKHNITKPYKCPKCPKRFIKEEQVNTHLQKHDRSHSKKPKDQSNQDTSKRFLCEVCSKSFTQSTTLLAHLRAHNGIKPFACKVCTRPFTTNAYLKMHMRTHTQERPYVCQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKHFRRLKSLKEHVFIHTGQKPYACPTCDRKFNNNGSRYAHSKRCKQNLQAQVTLQHISAEEIQEHSIQNDSGQIEIHEQPQMEIQSQRISLPTTSQQGAKQQNNIKTITIAARNPEGGFNQHHIMASHQEILMPLLLPLTMVEPMPLTVTLADVGEEVILPEGTKIFTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -