Basic Information

Insect: Encarsia formosa
Gene Symbol: -
Assembly: GCA_030522645.1
Location: JAPYYY010001263.1:7818-10716[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5e-05 0.014 17.5 0.1 1 23 27 50 27 50 0.96

2 16 7e-08 2e-05 26.5 1.7 1 23 63 85 63 85 0.99

3 16 0.00052 0.15 14.3 2.9 2 23 110 131 109 131 0.96

4 16 8.5e-07 0.00024 23.1 0.3 2 23 138 160 137 160 0.92

5 16 0.00016 0.047 15.9 0.1 1 23 166 188 166 188 0.98

6 16 0.00022 0.062 15.5 1.4 1 23 194 216 194 216 0.99

7 16 2.1e-06 0.00059 21.9 0.3 1 23 222 244 222 244 0.98

8 16 0.0012 0.34 13.2 0.0 1 23 250 272 250 272 0.97

9 16 0.00018 0.051 15.8 2.0 1 23 278 300 278 301 0.93

10 16 6.1e-06 0.0017 20.4 2.9 1 23 431 453 431 453 0.98

11 16 0.0051 1.5 11.2 1.9 1 23 459 482 459 482 0.95

12 16 4.1e-05 0.012 17.8 1.5 1 23 488 510 488 510 0.96

13 16 2.3e-06 0.00066 21.7 0.7 1 23 516 538 516 538 0.98

14 16 0.01 2.9 10.2 6.2 1 23 544 566 544 566 0.98

15 16 5.9e-05 0.017 17.3 0.9 1 23 572 594 572 594 0.96

16 16 3e-06 0.00087 21.3 1.6 1 23 600 623 600 623 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5e-05	0.014	17.5	0.1	1	23	27	50	27	50	0.96
2	16	7e-08	2e-05	26.5	1.7	1	23	63	85	63	85	0.99
3	16	0.00052	0.15	14.3	2.9	2	23	110	131	109	131	0.96
4	16	8.5e-07	0.00024	23.1	0.3	2	23	138	160	137	160	0.92
5	16	0.00016	0.047	15.9	0.1	1	23	166	188	166	188	0.98
6	16	0.00022	0.062	15.5	1.4	1	23	194	216	194	216	0.99
7	16	2.1e-06	0.00059	21.9	0.3	1	23	222	244	222	244	0.98
8	16	0.0012	0.34	13.2	0.0	1	23	250	272	250	272	0.97
9	16	0.00018	0.051	15.8	2.0	1	23	278	300	278	301	0.93
10	16	6.1e-06	0.0017	20.4	2.9	1	23	431	453	431	453	0.98
11	16	0.0051	1.5	11.2	1.9	1	23	459	482	459	482	0.95
12	16	4.1e-05	0.012	17.8	1.5	1	23	488	510	488	510	0.96
13	16	2.3e-06	0.00066	21.7	0.7	1	23	516	538	516	538	0.98
14	16	0.01	2.9	10.2	6.2	1	23	544	566	544	566	0.98
15	16	5.9e-05	0.017	17.3	0.9	1	23	572	594	572	594	0.96
16	16	3e-06	0.00087	21.3	1.6	1	23	600	623	600	623	0.98

Sequence Information

Coding Sequence: ATGCACTTTGCTATAGCCTGGAGTTCCAAAGCAATTAAAAACGGTTCCAAGAAATCCACCTTGCCCAAATCTTTCACCTACATGTGTGGAGTTTGTGACGAACCATACTCCCAGGAAAAAGATCTCGTGCGGCACATCAAGCAGAAACACCAGACGGAGTCACGTGAAAATTCCAATAGTTTCTCTTACCAGTGCAACGTGTGCCAGAAGGTCTTCGAAAAAAAGTCAAACCTGTTGAGGCACTTGAAAATGCACGAGAAACCAATATCCGAGGACGCGGCTATAATAAATCAAGCGAAATTCATCGAAAATGCGAAGACGAAGCTCCGATGTAGCTTTTGCAACAAGGTGTTCGGTAGCCGTGTCAGTTTCCTTCGTCACCATCGCGGTCACACGAACGAGTGGCCGCTGATCTGCGAGAAGTGCGGCAAAGGGTTCAGAACTAACTACGATCTGAGACGCCATATCAGCGACGTCCACGAAAAGCGCACGAGGTACGACTGCGAGATTTGTGGAAACACTTTCGCTTCAAAAGTCAATCGAGATGCACATTTAAGAATCCACACGGGCGAAAAGCCCTACACCTGCCGTACTTGCTCCAAGAACTTCCGCTCGGTCAACCTTCTCTGGGCACACAACCGGACCCACCTGGACATAAGAAAGTACCAGTGCGATAACTGTCCCTTGGCATTCAGGAGCAAGCAGAAGCTCCAGGCTCACATGAGCGTGCACACCGGGGTCAGACCGTATCCGTGCGACGTTTGTGGACGGGGCTTCGCGGCCCGAGGCGAGGCCAACCGACATCGCTCGGTGCACTTTCCGGACAGGCCGTTCCTGTGCTCGATCTGCGGAGTGGGTTTCAGACTCAACAGATACCTGACCACGCACATGAAACAACACCATCCCCATGAGTCCAAGTCTGACAGAGATGCattaaaagGTACGGcagaaaaaggaataaaaattagcTTTAAACAGTTCAAGAAAACCCTCAAAACTTCACCCATAAAAGTAAAAAGCGAAAAAGTCGTTCAAGCATCTTCGAAGCCAATTAAAAAACGAGTAAGTCAGATCGTCAAGAAAAAATTAGTTGTTAAACACGTCAAGACTGAGAAAGCTgaatctaaaattaataaaaaacgtgACGCTGAAATTATGGAGTCGGCAAATTTTATCACAGACGATTTCGCCAACGATTCTTCGAGCGAAGACCAATTTGCGTCAACGTCACCCGACCCTCCGCCAAAACCCCCAACCAAATCCAAAAAACGCAGTACAACGACTAAAATGCACGAGTGCAACCTTTGCAAAAAACGATTCCGCAACGCAAACCTTTACGAAAATCACATGCGTGTACACTCAGGTGAAAAACCGTACTCCTGTCACATTTGTGGCACCAAATTCGGTCCGGTCGGATCTCTCTACTACCATTTGAAGCATGTCCACGGTGGCGTCAAAAATCACGCCTGCGACGTATGTGGCAGATGCTTTGCCATGAAGTCGGCTATGGAGGACCATCGAAGAATACACACGGACGAAAGGCCTTTTGTTTGCGACTCTTGCGGGAAGACCTTCCGAACTCGCGCTTCCTTGTTTATACATAGCAGGATCCACACAGACGAGTTTCCCTTCAAATGTAGCTACTGCAACAAATTCTTCAGGTGGAAGCATCAAATGAACAATCACGAGACCACTCACACGGGGGAGAAAAACCACATTTGTGATATTTGTGGAAAaggctttGGTGTCAAAAATGAGTTGTCgaggcACAGGTTCACTCACTCCATGGAAAAACCATTTAGTTGTCCAAAATGCGAACTTAGTTTTGGCCAGAAAAGGTATCTCACAAAACACATCAGGATGAGACATTAG
Protein Sequence: MHFAIAWSSKAIKNGSKKSTLPKSFTYMCGVCDEPYSQEKDLVRHIKQKHQTESRENSNSFSYQCNVCQKVFEKKSNLLRHLKMHEKPISEDAAIINQAKFIENAKTKLRCSFCNKVFGSRVSFLRHHRGHTNEWPLICEKCGKGFRTNYDLRRHISDVHEKRTRYDCEICGNTFASKVNRDAHLRIHTGEKPYTCRTCSKNFRSVNLLWAHNRTHLDIRKYQCDNCPLAFRSKQKLQAHMSVHTGVRPYPCDVCGRGFAARGEANRHRSVHFPDRPFLCSICGVGFRLNRYLTTHMKQHHPHESKSDRDALKGTAEKGIKISFKQFKKTLKTSPIKVKSEKVVQASSKPIKKRVSQIVKKKLVVKHVKTEKAESKINKKRDAEIMESANFITDDFANDSSSEDQFASTSPDPPPKPPTKSKKRSTTTKMHECNLCKKRFRNANLYENHMRVHSGEKPYSCHICGTKFGPVGSLYYHLKHVHGGVKNHACDVCGRCFAMKSAMEDHRRIHTDERPFVCDSCGKTFRTRASLFIHSRIHTDEFPFKCSYCNKFFRWKHQMNNHETTHTGEKNHICDICGKGFGVKNELSRHRFTHSMEKPFSCPKCELSFGQKRYLTKHIRMRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -