Efor033384.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- -
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010021138.1:469-1321[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 0.00029 22.3 0.0 2 39 16 52 15 55 0.94 2 2 3.7 9.8e+03 -1.9 0.2 6 14 73 81 70 85 0.81
Sequence Information
- Coding Sequence
- atgGTGCGTAACTACGTTAAAAAGCGTAGAAGATGTAGTTGGAATGAAACAGAAATGAAACTCGCTAAAGCAAAAGTTTCAAAaggattttcaataaaaagcgtTGCCTCAGAGTTTGAAATTCCAAGATCGACGtttcaaagatatttaaaaaccCCTGAAAATGGTGTCAAGGGTGTTCATCCagGATTCAAAAGAACTTTTACTGATGAACAAGAAGAGGCACTGGCTGCTTACATTAATGCTGCATGGATAAAACTACAAGGTTTATCCAATAAACAAATTAGAAGATTAGCTTTTGATTTTGCCCAAAAAGTGAATCCTAATCATAAATTCAGCCCGGGTACTCATATGGCTGGTCAAGATTGGATGTCCAGATTTTTGAAAAggcataaattttcaaatagaaaAGATGAGCACACCAGTAGAGCAAGAGCCAATGGATTCAATAAAGAAGCTGTTGGCGGAGCAACTGCAGCTGAAAGGGGAGAGACAGTAACAGCAGAAATCTGCATGTCTGCTGCTGGGAGATTTATGCCACCAATGCTTATTTTTCCCATAGTCCATAGTAATCCCAAATACCTTGTTGGAGCACCCGCTGGAGCTTGGGCAGAATTCCACAAATCTGGACGGATATAA
- Protein Sequence
- MVRNYVKKRRRCSWNETEMKLAKAKVSKGFSIKSVASEFEIPRSTFQRYLKTPENGVKGVHPGFKRTFTDEQEEALAAYINAAWIKLQGLSNKQIRRLAFDFAQKVNPNHKFSPGTHMAGQDWMSRFLKRHKFSNRKDEHTSRARANGFNKEAVGGATAAERGETVTAEICMSAAGRFMPPMLIFPIVHSNPKYLVGAPAGAWAEFHKSGRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -