Efor000286.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- -
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010000031.1:41990-46021[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.2 8.6e+03 -1.7 0.3 33 42 883 893 858 895 0.71 2 4 0.00067 1.8 10.1 0.0 7 39 899 932 898 937 0.88 3 4 6.5 1.7e+04 -2.6 0.0 10 34 1007 1031 1006 1037 0.82 4 4 9.2e-06 0.024 16.1 0.0 7 39 1061 1094 1057 1100 0.88
Sequence Information
- Coding Sequence
- ATGATTCCTGATCAACAAAATCTCCCTTTCTCAATGGCTTCAAACAATTTTCATGATTCGGCATGGTCTTACAATAGCAACAGCAACAAAGGATTCGAAATGGAAATTCACCCAGAACATTccattgaaaaagaagaaaaagagagtgTAATAACAATGTATTTTGAACACTCAATTTGCCGGAAAAAACTTGCTCTGCAATTGATGCTTCCAATAGAGTCTCTTGATACATGGCTGGTGGCAAAAGTTCAACAAGacataaaaaagttgaatgctcagttgaacaaaattaaatatcattATTCAACTTTAATGGATAGATGCTCAGCTGATTTGCATCAACCTTCTCATGGAAACAGTATTAACAACAGCTCCAAAAGTTCAGATTTGGATGTATTACAGAGATTCTGTacttgtgaaaaaaatagtaaagagTTAAAAGTTGAAGAGCAGCATTTTACAGATCAAGAGGAAGATGCTATTACTCTGTACTATCAACGCAAGATCACTGAAAGTGTATTAGCAAAGTTGTGTACTATCTCCATAGAGTCTCTAAATAAGTGGCTAATGGAAAATACTAGAAGAAATGctgaaaaattacaaatgaaatttgaaaaaattgtaagagaTTTTTCAGCTTTTAATGATAAGTTATCTGTTGATACCAATGATCTGATTCTGCCTCATAGTGACAGCATCAGTAGCTCTTCTTTGAAACTGCAGTCAGCTTCTGAAACTGATCCTAAGATAATGCAACCATATCGTTCTTAtgaagatgaaagaaaaaatgcaaTTAGACTTCACTACAAAGATCATTCGAGTGATTTTGAAAGTGAAGAGTCCAATATCTTGGTTATTGATAAACAAACCGAAGAAAAACAACTAAACCACAATGTTCACCATCaagataatataattattaaggAAACTGATACCTTGCCTGTTAATGAATATGCTGAAGAAGAACAGCTTAGCTACAATATTCATCATCAAGATGATATGATTGTTGAAGAAACTGATAGCTTGCCTGTTCATGAacatattgaagaaaaaaagctaAACTACAATGCTCATCATCAAAATGACAAGAATGTTGAAGAAATTGAAATCGGTCCTGCTAATATACATAATGTAGAAAAACATCTAAACTACTTCGAAAATTTGCTCGATAATAAATCTGTCAAAGAAAGCCAACAAAGTTATGAACATTATCAAAACAATTTAACCCGTGAAGAGACTGAGACTTTGTCTTTTAATGTACATATCGTGGAAAAACAGCTAAACTACCTTGAAGCGTTGCTTGATTGTAAATCTgtcaaaaaaagacaaaaaaattatgaacttcATCAAGACAATTTTTCCAATGAAGTGACTGTGAGCTTGCCTGTTAATAAATATGTTAAAGAAAAACAGCCAACTTACCTTGAAACTTCAATTAATAATGAATCAATCAAAGAAAGTCAACAAAATTATGAACTTCATCAAGAGACTAAGACCATGTTTGGTAATGAAACAATTGAGGAAGATcctcaaaattatatttatcaggAGGATGatggtttttttgataatattaattcCTATCTCAGTGTTGGATACAtcgaggaaaaagaaaaaaattacgaacTTTCAGATCAAGACGTCAATTCGTTTGAACAGACCAATCAAATACCAAGCGGTTCGTGCAAGCCTCCAAATTTTTTCACGGAAAGTACTTTTAAATCTTATACTGAAGCTGATAAAGAAGGAGCACTTGCTCTTTTCAATCTGTACATTCAAAATGTTTACGACTACCACTCTGCTACCTTGCATCACCAAACCATTTCTACGTTCTCATCAACTGAAAACAGCAGCAGCAATGACAGCCACACCGCTCCGCAAAGTTTCAATTCTAGCTTTTCTTCTAAGTCATCCTTCAGTTCTGACTCCAATAGCTCCGGAAGTGGTAGTGATAGCTCTAATGGCAGTTCTTCATCCTCGGGATCGTCTTCCAGTTCTGACTCTACCAGCTCGAGAAGTCGCAGTGCAAGTCGTCAAAGTTTTAGGCATCGCTCTTCTTCAAAATCGCCTTCCAGTTCACGCTCTAACAGCTGCAGAAGTCGCAGTGTTAGTCCCGAAAGCTCATCTTCAGATACGTCCTTCACATCCAACATTAGTTGTAGCAGCAGAAAAAGTATCCCacaaagcttaaaaaaatattcatcctCAGAATCAATTTCTATTCCTAACTCTGTCATCAGTAAAATTTGGTcaccagtttttaaaaataatacaccTCTAGGCCTTGTCAACGAAGATGGTATCATGGAAAAACCTTGTGAAGAAGAAGACACAAATAACCAGGAAAAATCGTCTGACATTATTGAAAAAGACAAAGACAAGAATGACAGCAATGATGTGGATAGTTGCAAGGAAAAATCTTTCAATGATAGCAGAGAAGCTATTCTGAAGGAAAAATCTTTTAACAGGAGTAAAGAAAACAGtagcaaaaatataaaaaaaaagtcatggaCACGCGGTAGTCAATACagtgacgaaaaaaaagaagaaatggtCGCGCTCTATCGAGATACCGATATATCTTTAAGAGCTTTGTCACGTAAATCAGGTATAGCAAGtgacactttaaaaaaatggatgACAGGATTAGAAACTAAGTACAAACGTAGAAAATATTCTGATAGTGAAAGAAAGCGAGCTCTTGAATTTTATCGAAAAGGAAATATTAGTATCGAAGCAGCAGCGCAAAAACTAGGCATTTTGAGAGCAACGTTGAATCATTGGGTTGTCAAAACCAATTCAAAAAAGACCATATCAAAATATTctgctcaacaaaaaaaaaaagcacttgaGCTGTATAACCAAGGTAATATAACTCAAGTCGAAGTGGCCCGTCGACTTAAAGTCCCTCGATCAATTATAAGACAGTGGGTACACGAAAAAGATTATTGGGCAGACGGAGTCAAGCCTGATAAAGTTGTGAGGAAGTATACCGAAGAAGATAGAGAGAAAGTACTTGAGCTTTATCGCAAAGGTAATATTACCCAAAATGAAATAGGACGTCAACTGAAGATTCCTCGAGGAACTGTTCATAATTGGGTACATCAGAAAGAATATTGGGCTAACGAAACAAAACCGGTTAAGACTGGTCAACCGTACTACCCTGCTGAGATGAGAAAACGAGCCCTTGAGATGTATAATCAAggtaatttttctcaaaatgaaGTTGCTCGTCAATTCAAAATTCCGAGGCCAACTTTGCAACTTTGGatcaataatgaaaaacaagAGCGCCAAAAAGCTAGTCGCGTCacaagaagaaagaagaatagTTCGACTTAG
- Protein Sequence
- MIPDQQNLPFSMASNNFHDSAWSYNSNSNKGFEMEIHPEHSIEKEEKESVITMYFEHSICRKKLALQLMLPIESLDTWLVAKVQQDIKKLNAQLNKIKYHYSTLMDRCSADLHQPSHGNSINNSSKSSDLDVLQRFCTCEKNSKELKVEEQHFTDQEEDAITLYYQRKITESVLAKLCTISIESLNKWLMENTRRNAEKLQMKFEKIVRDFSAFNDKLSVDTNDLILPHSDSISSSSLKLQSASETDPKIMQPYRSYEDERKNAIRLHYKDHSSDFESEESNILVIDKQTEEKQLNHNVHHQDNIIIKETDTLPVNEYAEEEQLSYNIHHQDDMIVEETDSLPVHEHIEEKKLNYNAHHQNDKNVEEIEIGPANIHNVEKHLNYFENLLDNKSVKESQQSYEHYQNNLTREETETLSFNVHIVEKQLNYLEALLDCKSVKKRQKNYELHQDNFSNEVTVSLPVNKYVKEKQPTYLETSINNESIKESQQNYELHQETKTMFGNETIEEDPQNYIYQEDDGFFDNINSYLSVGYIEEKEKNYELSDQDVNSFEQTNQIPSGSCKPPNFFTESTFKSYTEADKEGALALFNLYIQNVYDYHSATLHHQTISTFSSTENSSSNDSHTAPQSFNSSFSSKSSFSSDSNSSGSGSDSSNGSSSSSGSSSSSDSTSSRSRSASRQSFRHRSSSKSPSSSRSNSCRSRSVSPESSSSDTSFTSNISCSSRKSIPQSLKKYSSSESISIPNSVISKIWSPVFKNNTPLGLVNEDGIMEKPCEEEDTNNQEKSSDIIEKDKDKNDSNDVDSCKEKSFNDSREAILKEKSFNRSKENSSKNIKKKSWTRGSQYSDEKKEEMVALYRDTDISLRALSRKSGIASDTLKKWMTGLETKYKRRKYSDSERKRALEFYRKGNISIEAAAQKLGILRATLNHWVVKTNSKKTISKYSAQQKKKALELYNQGNITQVEVARRLKVPRSIIRQWVHEKDYWADGVKPDKVVRKYTEEDREKVLELYRKGNITQNEIGRQLKIPRGTVHNWVHQKEYWANETKPVKTGQPYYPAEMRKRALEMYNQGNFSQNEVARQFKIPRPTLQLWINNEKQERQKASRVTRRKKNSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -