Efor008722.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- -
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010002215.1:2488-7084[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.2e-12 1.9e-08 35.6 0.0 1 39 370 409 370 413 0.90 2 4 1.3e-11 3.6e-08 34.8 0.0 2 39 425 462 424 465 0.94 3 4 1.9e-18 4.9e-15 56.7 0.0 2 45 480 524 479 524 0.97 4 4 2.1e-18 5.7e-15 56.5 0.1 1 42 531 573 531 574 0.97
Sequence Information
- Coding Sequence
- ATGGCTAAAAAAAGACACAGACGCGTAAGAGCCGAGGGGAGGTCGCGGGGGGAAACGGCGGGACAACTGAAGAGAAAGGGCCTGTGCGACGCGCCCGGGCGCCGAGGGGGGCCCGCGGCCCATCGCTACCAGGACGACGACCTGATTCCCTTACTGAACTTCACCAAGATCAAGACCAGCAGCAGGCACAAGAGGGCCCGGGCCAACAGCAGTAGCGCGTCGGCAGGTGGATCAGCGAGCTACatcagcaacaacaacaataacaacaataacaacaacaacgacaacGAGCATCAGTCTCAGATCGGCGCGCCAGCCTCGGGCGCCAATCGCCCCATCACGGAGTCACTTCGACACCATCACCGTCGCCATCCCAATCACCATCACCGTCATCACCCCCTTCACCACCGACTCGGAGACCACAAGTACAAGCAGGAGGATCTCGTCGAAAGCTACGTTCGAGATTGCAATAAAGAGAACCTTCGAGACTGTTGGACCACCGAAGATGACGATTGCATGGAGACGTCAGGAGCAAGAGCAGCGAGAGCATCGAGCCCTACATCAGTAGTCCTGGACGCGTGTCAACGCAGTGGCACTACCGCAGGAGGTGGTGGAAGAGGTGGTGTTGTTACGAACGTCAAAAACAACATCAACAACAACGCCGCGAGCACGCCCACAACCAACAACAACGGCGATATGTTTTGCCACACAGGTCTCGGACATTACGGACATCACCCAGATCCAGCCGAAGTAGACCTGCCGCCCGAGACCCAACCGACGCCGCCGAGCGCGACCCTCGTCGGTACCACTATAACCCACCTCAGAGACACAGATCATCACGCGACAGATATTCAAAATTGCGACAGCGTTAAAATAAAGTTCGAAACCTTGCACACTATGGATTCGTCGGATACGATCGACATTGACAGCCACATGTCGGATCGGGCGAGCGTTAGCTCTAAAACCGAAGACAACATGATGATGATTACACCCGAGCTACTAGGACTCATGCCTTCGAGTAGTTCGGTACATTCAGACTCGGGCGAAAATAATTCACGAAGTCATTCTGGACAATCGGGCTCTGGCCACCATGGATCTAAGTCGTGGACGCAAGAAGACATGGAAGCGGCACTTGATGCCCTTAGGAATCATGACATGAGTTTAACTAAGGCTTCGGCTACTTTTGGTATTCCGTCAACGACTCTTTGGCAACGTGCCCATCGATTGGGCATTGATACTCCAAAAAAGGACGGTCCCACAAAATCCTGGAGCGATGAAAGTCTGAACAATGCCCTCGACGCATTACGGACTGGTACGATTTCCGCGAACAAAGCTTCCAAAGCCTTCGGCATACCCTCGTCGACGCTGTACAAAATAGCAAGAAGAGAAGGAATAAGGCTTGCAGCACCTTTCAATGCCAGCCCAACCACTTGGTCGCCTGCTGATCTGGACAGGGCCCTGGAGGCGATAAGGTCCGGACAGACCTCTGTACAGAGAGCCTCGACAGAATTTGGTATACCCACCGGAACGCTTTACGGCAGATGTAAGAGGGAAGGAATAGAGCTAAGCAGAAGTAATCCGACACCTTGGAGCGAGGATGCCATGACTGAAGCTTTAGAAGCTGTTAGatTGGGACATATGAGCATAAACCAAGCAGCAATTCATTACAACTTACCGTATTCGTCTCTTTACGGTCGCTTCAAAAGAGGGAAGTACGAGGAGCCGGTTGTCAGCGAATTATCTCAGGATGGATCATCTCAGCATTTTCACCAGAGCCCGACTCAAAATCACTCGTCTTCTCTTCCTGATCAAATGCCTTACCAGGGCAGCTGA
- Protein Sequence
- MAKKRHRRVRAEGRSRGETAGQLKRKGLCDAPGRRGGPAAHRYQDDDLIPLLNFTKIKTSSRHKRARANSSSASAGGSASYISNNNNNNNNNNNDNEHQSQIGAPASGANRPITESLRHHHRRHPNHHHRHHPLHHRLGDHKYKQEDLVESYVRDCNKENLRDCWTTEDDDCMETSGARAARASSPTSVVLDACQRSGTTAGGGGRGGVVTNVKNNINNNAASTPTTNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDTDHHATDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTEDNMMMITPELLGLMPSSSSVHSDSGENNSRSHSGQSGSGHHGSKSWTQEDMEAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVSELSQDGSSQHFHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -