Efor025113.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- -
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010011558.1:1-5687[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 4e-13 1.1e-09 39.6 0.0 4 42 21 59 19 62 0.91 2 6 1.4e-08 3.7e-05 25.1 0.0 4 40 74 111 72 115 0.87 3 6 5.5e-16 1.5e-12 48.8 0.0 2 45 123 167 122 167 0.95 4 6 1.7e-16 4.5e-13 50.4 0.0 7 44 179 217 175 218 0.94 5 6 1.7e-17 4.6e-14 53.6 0.0 7 45 237 276 232 276 0.94 6 6 1.6e-15 4.2e-12 47.3 0.2 1 43 283 325 283 327 0.93
Sequence Information
- Coding Sequence
- tcttcTGGTGATTCATCAGCAAATGCCCAACACCGTGTGCGAACTGGGACTCGTTCAAAAGAAATGAAAGCTGCACTTGATGCTGTAAGCACTAGCGACATGAGTTTAAGAAAAGCTTCAGttaCCTTTGGTATTCCGTTTTCAACTCTCCACCGTGCTTTTAAATTGAGTATTCACacagcaaaagaaaaaaatcattctaaatCTTGGAGCAGTAAGAACTTAAAAAGTGCCCTGAATGCTTTAAAAACTGGTACACTTTCTGTAAAAAAAGCTTCTAAAGCCTTCGACATACCTCCCACTGTTCTGTATAAAATAGCAAAACGTGAGGGTGTTAAGCTTGGTGTCTTTTTTCCACCAATCCCACCTGAAGTTTTAGATAAGGCCTTGGATGCCGTAAGGAACGGGCAGATTTCAGTTTGCAAAGCTGCAACCAAATTTGGCATTCCTAAAAAAAGGCTTTATATTGAGTGTAAAAAAAGGGGGATCGAATTAAATAGAAGTAATTTAATACCATGGAGCGAAAACGCTGTTAAGGCCTTGGAAGCAATACGTTCAGGACAAATTTCAGTACAAAAAGCTTCGTCAGAATTCGGTATACCGAGAGGAACTCTTTACGCTAAATGTAAGAAAGAAGGAATCGATTTGAACAGAGGTCCTGGTACCAGAGGTCCTGGTACTCCAAAACCAATAAGCGAAGATGCTTTGAGGGCTTTAGAGGCTATAAAGTCTGGGCAGACTTCAGTACAGAAGGCTGCAAACGAATTTGGCATTCCAAGAACAACGCTTTATgctaaatgtaaaaaagaagGAATTGAATTGAGCAGAAGTTACTCGACGCAATGGAGCGAAGATGATATGGCTGAAGCTTTGGAAGCTgttagaatGGGTCAAGCAAGCATGTATCAAGCGGCCATGCTGTACAATATACCATATTCATCGCTTTCCAAGCGTTTCAGCCGCATGAATTCGAGAAATCGATTCTCACACGAGCTATCACAAAATGAAACATCTCAACAGACTACTCAAAGCGCGACGCAAACTAATTCTGATAAAGTATCATCTCAACATGCTATGCCAATTCCAACgcaaaataattcttaa
- Protein Sequence
- SSGDSSANAQHRVRTGTRSKEMKAALDAVSTSDMSLRKASVTFGIPFSTLHRAFKLSIHTAKEKNHSKSWSSKNLKSALNALKTGTLSVKKASKAFDIPPTVLYKIAKREGVKLGVFFPPIPPEVLDKALDAVRNGQISVCKAATKFGIPKKRLYIECKKRGIELNRSNLIPWSENAVKALEAIRSGQISVQKASSEFGIPRGTLYAKCKKEGIDLNRGPGTRGPGTPKPISEDALRALEAIKSGQTSVQKAANEFGIPRTTLYAKCKKEGIELSRSYSTQWSEDDMAEALEAVRMGQASMYQAAMLYNIPYSSLSKRFSRMNSRNRFSHELSQNETSQQTTQSATQTNSDKVSSQHAMPIPTQNNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -