Basic Information

Gene Symbol
ct
Assembly
GCA_030522645.1
Location
JAPYYY010000386.1:28232-39527[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-27 5.4e-23 82.6 0.0 2 72 400 471 399 476 0.95
2 3 2.1e-32 4.4e-28 98.9 0.0 3 77 835 910 833 912 0.96
3 3 8.3e-31 1.8e-26 93.7 0.0 3 75 1076 1149 1074 1153 0.95

Sequence Information

Coding Sequence
ATGATTCTTTCCGGGCATTGTGTTTCGGGGCGCGGGGGAGTGGGCGGGTGGGGAGAATTCCGCGAGTTTGCAGACGCCCTGCCAATAAACGTCGGGGCGaTAAGCCGACTGGTGGAGGAGGTGTCGAGGCTCCAGGTGAGCCTGCAGCGCCTGCAGGAGAGCTCGGCCCAGACGACGGCGCGGCTCGAGGAGGAGCTCGAGGCGCGCCGACAGCACATAAGCCGGCTTGAGTCGAGACTGGACCGGCAGAAGGACTACGAGGAGCTCAAGCGCGAGATGAGCGTCTTGAGGTCGGTCGACCTGAGCCAGATACCCGCGGGGGAGGCCGGCAAGAGCCTCGAGCAGCTGTTGATAGAGCGCACCAAGGCCCTGCAGCAGGCCGAGTCGCTCAAACCCCCGAGCACGCCCGACACGATAGGTGGAGTATCGTCGCCCCTGCAGCGTGCCGCGACAGCCTCGCCGTCGTCTATAGCTACTCCCCGTCCTCCGTCCTCGTCCTCGTCGGTCCTCTTCCCACCGCCCCTGCAAAACGTCGAGACCTTCGGCTCTTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGCTCCCTGGAGAGGTCGATCATGAGCCAGCAGCAGCCAGTCGCCAACCACCACAACCAACACCACCACCCAATGCCGGGCTCGACGCCACTTAATCACCACCACCGTCTTCTTACGTCGCCAACAGATCAGATCTCATCCTCGGCATCCTCGACCCCGGCCAAGTCGAGCACGCCTCTGGGCGTAGCCGCCTCGAGTCTCCTGGAGCCAGCGGAGAAGGCGACGACCCCGGTCCCGGGTCACGAGACCCCGGCACCGCCGACGCCGTCCTCCACCACGGCCGGGGGACTCACCTCGCCGCCCATGATGGACCTCAACGGCCCGATGTCCATGCCCCCGCTGGCCAAGAGCCCACCCGAGGACAACAACTGCCACAGCATAAACAACAACAGCCACCACCTGGCCAACAACAACCAGGTCGGCCTGGGCGGCGTCTTGGACAGTCTCAAGAGCCCGGGCTTCCGGTTCGACGAGCGCACCCACCCCTTCAGATTCGGGGACGAGTTCGGTGCCGCGGGCATGGTCGGCCGACTGGGCGAGTCCCTCATACCCAAGGGCGACCCCATGGAGGCCCGGCTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAGCCAGAACCTGGACACGCTCCACATATCGCGGAGGGTGCGGGAACTCCTCTCCATCCACAACATCGGACAGCGTCTGTTCGCCAAGTACGTACTGGGTCTGAGCCAGGGCACGGTCAGCGAGTTGCTCAGCAAGCCCAAGCCCTGGGACAAGCTCACCGAGAAGGGACGCGACAGCTATAGAAAAATGCACGGCTGGGCCTGCGACGACAACTCGGTCATGCTGCTAAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGAATGCCCGCGTTTTCGCGAGGTCCCCAGGAGTCCTCGGGTGGTAACGGAAACTCGAGCAACACCCCGAGCACGACGCCCCAGGACATGAGCAGCGAGGACCGAATCTCCCACATGCTCTCCGAGTCGGGGCACATGCAGCTGAGCCGTCAGAGCGACGCGGACGCGTCCAACGACGCCGACAGCAAGAGCCCGAGCCGGCTCAACTGCCCGAGTCCCTTCGGCAAGGACAGCCAGAACCGCAGGCTCAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCCAGGATCTACCAGGAAGAGCTCGCCAAGATCATGGGCCGGAGGGTCGACGATCTGCGCGCGCCCCGAGATTTCCCTGCGAGCGCGATGTTTCCTCAATTTTTCAGCGGACAGAATCTCCAGGGCATGGAGCGAACCCAGGAGGAGATACGCATGGCTTTGGACGCCTACCACCGTGAGTTCCAGAAGCTCAACGTGACCCAGGGACTGCCCTATCCACCCCAAATATCGAGTCTGCTGGCCCTTCAGCAGCACGCCATCCAGCAGCACCATTTGGCGTCTAACGGAGCCGCGGGCACCAACGCCGCAGCcgcggcagcagcagcggcagccgCAGCGGCCGCGGCCCAAGATCTGAGTCTGGGCAACATCCTCAGGAACAAGATGATCAACGGCGTGTCcgaggaggagaaggagaagATGGAGGAGGCTATGAGGCACGCGGGCAGCGCCTTCTCCCTGGTGAAGCCCAAGCAGGAGCCGACCAGCGGTGGAACCGGCGGACCACAGTCCACGCCCGGAGGCTCGAGCGCGAGTTCGCCATTGGGCAACTCGATACTGCCCCCGGCGATGACGCCCAGCGAGGAGTTCACCGGCGCCGCTGCAGCGAGCCCGCTCCAGAGAATGGCCTCCATCACCAACAGCCTCATCAGTCAGCCGTCCACGCCGACCCATCACTCGGGTAACCAGCGACCGCTCAAGGCCGTGCTACCTCCCATAACCCAGCAGCAGTTCGACATCTACAACAACCTCAACACCGAAGACATCGTCAAGAGGGTGAAGGAGCAGCTGTCGCAGTACTCGATCTCGCAGCGTCTCTTCGGAGAGTCCGTCCTGGGTCTGTCGCAGGGCTCCGTCTCGGATCTCCTGGCCCGACCCAAGCCCTGGCACATGCTCACCCAGAAGGGTCGCGAGCCCTTCATACGTATGAAGATGTTCCTCGAGGACGACAACGCCGTGCACAAGCTCGTGGCCAGCCAGTACAAGATAGCACCCGAAAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACCCAGcttgTGGGACGCCAATGAAACCGATGCCACCTACGAAGCTTGTCCAGGAGCAACTGCAAAACGCCGCCAAAGCGCAAGCGGCGGCCCAGTCCGCGGCGCAGGCGGCAGCAGCGGCTCAACATCAGCAGGAAAGCCAGATGCAACTAGGACCACCGCAGCAGAGTCCACAGCTGCCACAGCACCCACAGACATCCCCGATGATGCTCAGTCCACCGGGTTCGTTACTCCCGCACTCGCAGCTCAGCATGCAGGAACTCCACAAgaaacaacagcagcagcagcaacagcaacaacagcagcagcatccTGGAGCTCAGTTGAGTTTGCACTCGCCCCATCATCAGATGGCGTCCTCGGCCCTGCGAGCACTCCACCCGCACATCTCCCCGAGCGTTTACGAGATGGCCGCGTTAACCCAGGATCTCGACACGCAAACCATCACGACCAAGATCAAGGAAGCCCTTCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCCGTACTCGGGCTCTCTCAAGGCTCGGTCAGTGAACTCTTGAGCAAACCCAAACCCTGGCACATGCTGAGCATAAAGGGTCGCGAGCCATTCATCCGGATGCAGCTCTGGCTGTCCGACGCTCACAACGTAGACCGGCTCCAGGCCATAAAGAACGAACGCCGAGAAGCGAGCAAGAAGCGCCGCAGCAGCAACACCGGTCACGACAACAGCTCGGATACCTCGAGCAACGACACGGCCGAGTTCTACCATGCATCGCCATCGCCCGGGCCCACCTCTGCCAAAAAGCAGCGAGTCCTCTTCAGCGAGGAGCAGAAAGAGGCCCTGCGGTTGGCGTTCGCCCTGGACCCTTACCCGAACGTCGCCACCATCGAGTTCCTCGCGAGCGAGCTGGGGCTCTCCTCGCGGACGATAACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCGCACGGACAACCCGAGCCGGCTCAATCGGCTCGGGAGCCCGGACAGCCCTTCGACCCGGTCCAGTTCCGGCTTCTCCTCAACCAAAGACTGCTCGATATCCAGAAGGAGCGACTGGGCTTGGGTCTGGGTGGCGTACCTCTGACCTACCCGCCCTACGCCTTCAATCCTAACCTGGCGGCCCTTGTTGGCAACGCTCTCAAGGAGCAATGCTCTGGCCTCGACCTGTCCATGGGCTCTCTAAAACGCGAACCCAACCAGGAGTTCGAGGACGAGGACGCCGACGACGCGATGAGCAACCTCGGTAGCGAGGACTCCGAAGGCTCGGCTGCCAGCATCAAGCGTGAACCCGCGGAAACGCCAGTGCCAGCCAACTCCGGAGGTGGCGGCGGTGGTGCGAGGTCCAACAGACGAAAACCCGCAGCACCCCAGTGGGTTAACCCCGAGTGGCAGGAACCCGCGAGGACCGGCGAAGAGGTCATCATCAACGGCGTGTGCGTGATGCAGACGACCGACGACTACGGTGTCAAGCGGGAAACCGAGGACACGGTCAGGGTCGACCCGACTCCAGTCCAGGATCGCTTCGACGACGACGCCCAGAGCGACGTATCTTCGGTATCGGCGAGCAACGCCCAGGATCGGGAGAGCTGCTCGCCCAGCCCCAAGTCGGCGCAACAGAGCCCGGCCATGGCTGCGACCTCGCCGACGAGGCCCTCCTCGATCTCCCAGCCTGCCGAGGACAGTCCCAAGGACGTCAAGAACGAGCCCGAGGAATCGTGGGACTATTGA
Protein Sequence
MILSGHCVSGRGGVGGWGEFREFADALPINVGAISRLVEEVSRLQVSLQRLQESSAQTTARLEEELEARRQHISRLESRLDRQKDYEELKREMSVLRSVDLSQIPAGEAGKSLEQLLIERTKALQQAESLKPPSTPDTIGGVSSPLQRAATASPSSIATPRPPSSSSSVLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQPVANHHNQHHHPMPGSTPLNHHHRLLTSPTDQISSSASSTPAKSSTPLGVAASSLLEPAEKATTPVPGHETPAPPTPSSTTAGGLTSPPMMDLNGPMSMPPLAKSPPEDNNCHSINNNSHHLANNNQVGLGGVLDSLKSPGFRFDERTHPFRFGDEFGAAGMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNSVMLLKSLIPKKEYVSGKEQGMPAFSRGPQESSGGNGNSSNTPSTTPQDMSSEDRISHMLSESGHMQLSRQSDADASNDADSKSPSRLNCPSPFGKDSQNRRLKKYENDDIPQEKVARIYQEELAKIMGRRVDDLRAPRDFPASAMFPQFFSGQNLQGMERTQEEIRMALDAYHREFQKLNVTQGLPYPPQISSLLALQQHAIQQHHLASNGAAGTNAAAAAAAAAAAAAAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPTSGGTGGPQSTPGGSSASSPLGNSILPPAMTPSEEFTGAAAASPLQRMASITNSLISQPSTPTHHSGNQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNPACGTPMKPMPPTKLVQEQLQNAAKAQAAAQSAAQAAAAAQHQQESQMQLGPPQQSPQLPQHPQTSPMMLSPPGSLLPHSQLSMQELHKKQQQQQQQQQQQQHPGAQLSLHSPHHQMASSALRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQAIKNERREASKKRRSSNTGHDNSSDTSSNDTAEFYHASPSPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQPPHGQPEPAQSAREPGQPFDPVQFRLLLNQRLLDIQKERLGLGLGGVPLTYPPYAFNPNLAALVGNALKEQCSGLDLSMGSLKREPNQEFEDEDADDAMSNLGSEDSEGSAASIKREPAETPVPANSGGGGGGARSNRRKPAAPQWVNPEWQEPARTGEEVIINGVCVMQTTDDYGVKRETEDTVRVDPTPVQDRFDDDAQSDVSSVSASNAQDRESCSPSPKSAQQSPAMAATSPTRPSSISQPAEDSPKDVKNEPEESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00645839;
90% Identity
iTF_00645839;
80% Identity
iTF_00645839;