Basic Information

Gene Symbol
Arid4b
Assembly
GCA_030522645.1
Location
JAPYYY010000004.1:65055-72506[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-29 2.6e-25 90.4 0.1 1 89 312 399 312 399 0.95
2 2 3.5 2.8e+04 -2.6 0.1 49 78 1707 1737 1703 1739 0.74

Sequence Information

Coding Sequence
ATGTCTGGTAATGTTTTACAGGGGGACGATCCGCCTTACCTGTCGGTGGGCACTGAGGTCAGTGCCAAGTATAAAGGAGCATTTTGTGAAGCTAAGATCAGAAAAGTTGTACGCAGTGTTAAGTGTAGAGTTACTTACAAAGCAGGGCTAGGCACAGCCACTGTTACCGATGAACAAATCAAAGGTACACTTAGAGTTGGTGCTTCTGTTGAGGCTAGACCCAAtgacaaaaaagaattttttgaagcaaCCATCACCAAGATACAAGATTGTAGTCAGTACACTGTAGTATTTGATGATGGGGACATTACTACTCTGAGAAGAACAGCTCTATGCTTGAAGAGTGGCAGGCATTTTGCTGAAAGTGAAACTTTAGATCAATTGCCTTTGACTCATCCAGAACATTTTGGAAATCCTGTAATTGGTGGTAGAAGAGGAAGAAGATCCAGACAAACTCAagATGACAGCagtgatgaagatgatgatacCCCAAGAGGTAGCAATGACTCCGGCTCTGCATCTGGAGGTAAAGAAGGACCAGAAACTGAACCAGAAATTGGCAGAGTTGTTTGTGTGGAATTGGgggacaaaaagaaaaaagataattGGTTCCCAGGTTTGGTTGTAGCTCCATCTGCTCAGGACACTGTACGAATCAAAATTCGCGATGACTACCTTGTGAGATCATTCAAGGATGCTAGATTttacaCAGTGCCAAAAAAAGAAGCCACCGAATTCACCAAAGACTTGgtcaataaagttgaaaatagtGCTTTAAAAGTAGCTGTTGAAAAAGCTTtactatttttagaaaaaaatgaattacccCCTCATTGGGATAGAGACTCTCTTTTTGGAAATTCAGTTTCCAGTGATAACAGTGACTCTGACGGAGAGCTTGACTCAGatAGTTCTGATGACGAGCCCCGAGAAGAAAAAGATCATTTTGTAGCACAATTGTATAAATTCATGGATGACAGAGGTACACCAATAAACAATTGTCCAATGATTGGTAACGAGGATATCGATCTCTACAGATTGTTTCGAGCTGTGTATAAACTCGGAGGTTATAATCGTGTAACGAATCAAAATCAATGGAAATCAATAACTCGACGTTTGGGTTTTTCAATGCAAAATAATGCATCAACGCATAATTTAGTAAAGCAGGCTTACAAAAAGTTTCTGCATTCTTTTGAGGACTTTTACAGAAAATTGGGCTGTACAATGGTCAATCATCCAAGAGGGGGCATGAGAAAACCACGACCCGGACGAAGTCTGATTAGAGATAAAGATAGAAATACTCCAATACCGAGTCAAGACAAAtccattgtaaaaattgaaaaagaagaagaggacaaaaaaattactattccagaagaagaagcaaaaaaagaaaagcgtgaaataaaaaaagagccaGTAGTCAAGGAGGAGGAAccacaggtGAAATTAAAACGCAAGGAAGAACCACCAGATGAAAGTGTAAGCGGCCAAGATAGCGACGTCAATATTGATGCGGAAGAGGAGTCTTCCAGCAGTGAAAAGTCGCAAAAAAGCTCTTCCAGGCTCACCCCGTCTAGTGTTACTAGcggaaaatctaaaataatgACTCCTGGCCCAACCAAGAACAAAGAAGACgcagcaaaaaataaaaaaccggtGACAGAAAAGAAAAAGCCCGAGGTTAAGAAACAAGAAAAGAAAGAGGAGAAATCCAAAGAAGAAGATAGCACGAAAACACGATCTAAATCAAAGGAAGATGTATCGAAGGGCAAACCGAGCCCCGAAACTCGAGAAACCAGAACTCCTTCGCGagaacccgaaaaaaaaatcattccaaaacagaaaaaaatgacagAAGAGGAATTGAAAAAACGtggaagaaagaagaaagaagccGAAGGTGAAAAAGGAAAATCACCTGATGAACGATCAGTCGACCATGCTCCCTGTTACAAAGGTCCTGTAGAAATCGGTGACAGACTCAAAGTTTACTACGGGCCAACACACGAATCAAAAGTCACTTATGAAGCTAAGGTCATTGACATGGAAAAAGATGGAGCTGAGCCAGTTTACTTAGTTCACTACACTGGATGGAATACTAGgtaTGACGAATGGATAAAAGTATCACGTATTGCCCAGAACTTCACCCAAGGTCAGGGCCGTGTAAAAAGGTCAAAGGCAACTCCTCGTCCTCAGACTCCCAGCAGTACGCCTCAAGGAAAATCATCGAAATCTCTGACCGCGCCCAACGCTGGAACCGGTGCAGCATCGTCAGCAGCTAGGCGACGGGCGCTGGCCGACACTCCTTCAACTGGAGGTTCCGTAGGACCGAGTAGAGATTCTCGTAAGGATGATCGAGAAGGAACTCCTATTACTCGATCCATGACTCCGTCGCCTCTGATCTCTAACTCGCTGAGAACTAAGAGTCCGGCATCGTCGATAAGCAGCAGAACCACTCGCGTTACAAGAAATGCTGACTCTGCGTCGTCAAACGACCCAGGCACCAGACGTTCGAGAAGAGGCTCCGGTCACAATGACCAAATGATGCTGACTGAGACCGAGGACTCGGATACGCTGTCATCAGACGGTAGCGCTGGTCGCGAGAGTACGATTTCTACCAAATCAAGACAAAAGTCTACCCCCGTGCTGGAGAGAAATCGACGAGAAGCCAGACGCAGAGCTGAAAGTCGAATGAAAATTGAGGAAACCAGCGATGGCGAGGTGGAGAAGGACACCGACGAACCAAGACGAGGAAGAAGACTGAGAAAACCTCTGGGTAAGATACAGGATATTAAATCCGAGCCCGACAGCGAAGAGGAACAGCCGAAAGGTAGAGATTTCGATTTGAATCAAATCCGGTCCGAGCTCAAAGGATTCGACAAGGCTGTCAAATTGGAAATCCCAAGCGTTGAATCTAGTCGAGGTGATAGCGAAGACCAGCTGTCTTCGCcgataaaacaagaaaaaattgatcccGAAACTCATACGGAGAAGAAGgCTGTTCCGGaatcagaaaagaaaaaagaaactccAAAGCCCGAATCACAGAATATATCTCCACTGAAACGAGACGCGATCAAAATAGAAGCTTCTCATTTTGATAGCACTGaagatatttatgaatttaaagaaCCCGAACCATTTGAATTTGAAGTAAGAAATAAAAGAGATTCAGGCGGTAGTAGCAGCAGTAGCACTGACAAAGACAAggacaaagaaaaagataagGATAAACTGAAGAAGCGTATGTTTGAAGAAGACTTGAAAAGTCCAAAGAAACGTCAAAAGACATCTGGCACTCCAACGAAGACTGAAGCAAAGACTGAAAGTAGTACGACCGAGAGTGCGGATAGTAAGAAAAAAGTTCGCaagattttcaagaaaaatgaaGAACATGAAGATGCCGATGCCGAGGGTGAAGATGGTCCGACGAGTTCTAAAGAATTTTCTAAGTTTTATGCGGCAAATTACAGTAACGTCATAATAAAACGAAAAGGCACTGGTACGGGTGAGCCTTCGACGGAAGAAACCTCCGAGACTTCCAACGAGGACAAAGTGAAAAAGACTCCAGACGAAGACAAGAGTCCGAAAAAACGTCAACCAAAAACATTTGGTACCGCAACAACCGCGAAAAACGCCGATACAAAAGCTGAAACAGCAACGGAATCAGACCCGAAGAAAAAAGCGCGTAAGGCATTTAATAAAAAGATCGATGATTTGGAGGAAAAAGACGAGAGCGATTCCGACTCGAAGGAGCTCatcaaatttttgtcaaattacaGTGGATCCAGAGCTCCGTCTCGTAAGGATGCATTCGTCAAGTCTTCGGTTGAAACTGACGACGTGGATGAAAATTCCATGAGCGACGGAAAAGAAAAAGTGAAGAAGCTTACCGGCGACGATACCACCAAGAAcgtaaaaaagagaagaaacgTCGGTGCTTCATTAACGAAAACCGATGCCCCCGAAACCACTGACTTTAAAAAGAAGCAGGCAGTGCGAAGAGTCCCTAGCAAAAAATTAGGAGAAGCCGATGACGCCGACAACAGCGAGAGCGACGATCTGGGTGAACCACCGCTTAGAGATCAAACAAAGTACTTTTCTCATTACTCTGGACCAAAAGCAAAAGCGGCAGCTGCGCTGGCAGCAGATTCCGAAATTACCCAAGCTGCTTCAAAAACAGAAGCTCAATCTAGCGAGTCCTCGAAATTTCCACCCTCTAGTAAAGATTCGAGCCACGATAAAGACTTGAAGACCAAGGTTGGAGAGCCTGTGGCGCGTGCATCGCCGTCCGTCGACGCCAAACAAGGATCAAGCGCCGACAAAAAACGTATCACAACAGCTTCACCATCCGCGTCAAAAACGGAAACCAAGCTGGAGCCAAAAGCCCTAGACTTTACCCCCGTCATTCCTCATTCATTACCTGTACCTGCGCCCATAAGCGCCCGACTACCTGCAACGGCCAGTATCGAAGAGAAGCTCTCTGCTGCAGCAGTATTTCGCAGTAAACAGAAAGACGTTAAAAAGGAAGAAGAGATCGAAGTTACGacgagaaaaattataaaagacaCCATCAAGAAAGCCGAAACAACGTCGGTTAAGAAGACTAAAGAAAAAGAGGACACCAAGATTAAACACGAACCCGAAAAGAAAAAGCAGCATTTGTCCGAGCAAGTTATCGTCAAAAAGGATCCCTTGCAAGATGTAGAACTACGCAAGGATCCACTGCTCGAGGTGATGAAGAAAAAGGATGACGAGGTTTTAAAGGCCAAGAAGGAACCCGATCTTAAAGCTACGGTGTCCAGCCTAGCCTCGACGGTCACCAAGACTTACGGTTCCCAGAAGAAGGACGTGGCAGTGAAACTCGAAGATAGTTGGAAAAAGAATTTGCCCTCCACGTCCATCAGCATGGAGCAGGCAGCTTGCGAGCTACCTGGTAATGAACCCGTAAAAGATTTTGGAATTTTGCGAAAGGAGACGATCGTTAGCAAGATAAAGTCGAGCATGGAGCGCGACTCAATAGATTCGACCGACAGCAGCGATTCCGAAAGGCGGCTCACCATAATTGACAGCGAAGATTTCCCTGAAGACAAGTGCAATGATTCCGGTTCGGATGTGAAAAGCAAAAACTCAGCATCGAGCGTTGCTGGTCAATACAACTATTCGTCGCAACAAGAACACGCGACTGCGGTGCAAAAAGAACTGGTGCAGCACGTGTTCGGAATGATGCAGGGAAAGAACCCGAAGACTGAAGAAGATGGAGAAAACTTGAACTCACTGCTATGCGAAGAAGAGATACCTGGTTCTCCGACCCCGGGTACCGAGTCCACGGATCACGATCACCGGTCAACCAGTTCTCAGAATCTTGCAAAGTCCGACATGGcaaGCAAAATGGTCGCTTTTGTCGCCGCACAATTGCCCATCAGCACGGTTGCATCATCAACCCAGATGACGAATTGTGCCATCGTGGATAACTGTTCTATGAGCAGCGGGTTGAACGTTTCGGCCAGCTCCAGCAGTGTAGTCATGCACTCGTCTATGAGCGCAAGACAGGCAGCCGCAACTATTCACGCCTTGCGCCACTTTCACCAGGTACAGCCTCAGGTCCAGCATCAAGCTCAGCCCCAGGTACAAGCGCACCCACAGCCGGCTGTAATAAACCACCACCATCAAGCGCCAATAAGAGTCGCGCTCGCGCGGCGGGAGAGTAACGAAGCGGCTCCCGTGATGGACAACACTCCCCCTACTACCCCGGACTCGAGTATCTCGAACATCTCGGGATCCCCGCGGGACGAGCGCGCCGGTGGCTCAACACCCTCGTCTTCGGAGGACAACTCGAAGCTTAATCGCGACAGCTCCGAGGCTGAAAATGAAAGCTGTGGCAAGAGCAGCGGTCCGGGTCTCAGCGAAGACGACAACATGTCACCCGCTAACACCTCGCCCTCCTCGGACCGGATAGCCAAGCCACCCGCCAAACGAGGACTTGGCTCTGACGCTGAGAGCATATCGCCCATGAAAAAGCGCAAGAAACGAAGTCTCGACAACGCTTCGGCGTCCAACCAGAGTGTTGCCTCCGGTAAAAAGTCGCCAAGGCAGAGTTCTTCCAGAAATGCTAGACATGCTAATGGAAGCGACAGCGACGACACCAGCGAAGGCTCAAGTAATAATAACAACGCTGTGCAAAACAATCCTCTGACGTCTAGTAACACTGGATCATCAAGTATGGCTCTTACGGCTGGTAATACGGATCTTACGAACTTTTCGTCGAGGTCACCTAGACCTACTAAATACAACTTTTGCAATGATCTCGATCCTAATTTGGATGGAAATCAAAGGATTACAATATTACAGCAAAATCTCTCAGAGTTACGCAAAACATACAACGCTGTAAAATCGGAACTTGCCGCCATAGAAAGgcgacgaaaaaaattgaaacgaaGAGAGCGAGAAGccCAAAAAGCAGCAAAGGCTGAAATGCAACAGGCTTGCTCGTGA
Protein Sequence
MSGNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKAGLGTATVTDEQIKGTLRVGASVEARPNDKKEFFEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDEDDDTPRGSNDSGSASGGKEGPETEPEIGRVVCVELGDKKKKDNWFPGLVVAPSAQDTVRIKIRDDYLVRSFKDARFYTVPKKEATEFTKDLVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSVSSDNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKSITRRLGFSMQNNASTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGGMRKPRPGRSLIRDKDRNTPIPSQDKSIVKIEKEEEDKKITIPEEEAKKEKREIKKEPVVKEEEPQVKLKRKEEPPDESVSGQDSDVNIDAEEESSSSEKSQKSSSRLTPSSVTSGKSKIMTPGPTKNKEDAAKNKKPVTEKKKPEVKKQEKKEEKSKEEDSTKTRSKSKEDVSKGKPSPETRETRTPSREPEKKIIPKQKKMTEEELKKRGRKKKEAEGEKGKSPDERSVDHAPCYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGAEPVYLVHYTGWNTRYDEWIKVSRIAQNFTQGQGRVKRSKATPRPQTPSSTPQGKSSKSLTAPNAGTGAASSAARRRALADTPSTGGSVGPSRDSRKDDREGTPITRSMTPSPLISNSLRTKSPASSISSRTTRVTRNADSASSNDPGTRRSRRGSGHNDQMMLTETEDSDTLSSDGSAGRESTISTKSRQKSTPVLERNRREARRRAESRMKIEETSDGEVEKDTDEPRRGRRLRKPLGKIQDIKSEPDSEEEQPKGRDFDLNQIRSELKGFDKAVKLEIPSVESSRGDSEDQLSSPIKQEKIDPETHTEKKAVPESEKKKETPKPESQNISPLKRDAIKIEASHFDSTEDIYEFKEPEPFEFEVRNKRDSGGSSSSSTDKDKDKEKDKDKLKKRMFEEDLKSPKKRQKTSGTPTKTEAKTESSTTESADSKKKVRKIFKKNEEHEDADAEGEDGPTSSKEFSKFYAANYSNVIIKRKGTGTGEPSTEETSETSNEDKVKKTPDEDKSPKKRQPKTFGTATTAKNADTKAETATESDPKKKARKAFNKKIDDLEEKDESDSDSKELIKFLSNYSGSRAPSRKDAFVKSSVETDDVDENSMSDGKEKVKKLTGDDTTKNVKKRRNVGASLTKTDAPETTDFKKKQAVRRVPSKKLGEADDADNSESDDLGEPPLRDQTKYFSHYSGPKAKAAAALAADSEITQAASKTEAQSSESSKFPPSSKDSSHDKDLKTKVGEPVARASPSVDAKQGSSADKKRITTASPSASKTETKLEPKALDFTPVIPHSLPVPAPISARLPATASIEEKLSAAAVFRSKQKDVKKEEEIEVTTRKIIKDTIKKAETTSVKKTKEKEDTKIKHEPEKKKQHLSEQVIVKKDPLQDVELRKDPLLEVMKKKDDEVLKAKKEPDLKATVSSLASTVTKTYGSQKKDVAVKLEDSWKKNLPSTSISMEQAACELPGNEPVKDFGILRKETIVSKIKSSMERDSIDSTDSSDSERRLTIIDSEDFPEDKCNDSGSDVKSKNSASSVAGQYNYSSQQEHATAVQKELVQHVFGMMQGKNPKTEEDGENLNSLLCEEEIPGSPTPGTESTDHDHRSTSSQNLAKSDMASKMVAFVAAQLPISTVASSTQMTNCAIVDNCSMSSGLNVSASSSSVVMHSSMSARQAAATIHALRHFHQVQPQVQHQAQPQVQAHPQPAVINHHHQAPIRVALARRESNEAAPVMDNTPPTTPDSSISNISGSPRDERAGGSTPSSSEDNSKLNRDSSEAENESCGKSSGPGLSEDDNMSPANTSPSSDRIAKPPAKRGLGSDAESISPMKKRKKRSLDNASASNQSVASGKKSPRQSSSRNARHANGSDSDDTSEGSSNNNNAVQNNPLTSSNTGSSSMALTAGNTDLTNFSSRSPRPTKYNFCNDLDPNLDGNQRITILQQNLSELRKTYNAVKSELAAIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-