Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.39 2.4e+03 -0.5 0.1 7 14 82 89 80 98 0.76

2 3 2.8e-18 1.8e-14 54.3 3.2 1 34 114 146 114 148 0.97

3 3 4.1e-19 2.6e-15 57.0 5.8 1 35 173 206 173 207 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.39	2.4e+03	-0.5	0.1	7	14	82	89	80	98	0.76
2	3	2.8e-18	1.8e-14	54.3	3.2	1	34	114	146	114	148	0.97
3	3	4.1e-19	2.6e-15	57.0	5.8	1	35	173	206	173	207	0.98

Coding Sequence: ATGTTCCACGGCGCCGCGAGCGCGACCCCCTCGGCCAACTACAACTCAGACACTAACAACACTGGATACTCCCAGCAACCCGTGTATGTGCCCAGCAACCGTGTGTTCCAGTGGAACTCCCCCTACAACTCCAGCTCCACACAGAACTCCACATGGCATCCTCAGAGTACCTCCTCTCACCACGACCACTACCCGGCGACACACTCGCAGTCGCCTCACTTCCCCAACAGCTTCTACGCTGCTCAGACCACCATGATGTGGCGCACCTACGACCCCTCCTTCCAGAGGTCACTTCCTTACgACGAAGCGATGCAGTTCCAGCTGGGCGAAGGACGAGAGTGCGTCAACTGTGGCGCAATATCCACACCTCTGTGGCGCAGAGACGGCACTGGACACTACCTCTGCAATGCGTGCGGCCTCTACCACAAGATGAACGGCATGAACCGACCCCTGGTCAAACCCACCAAGCGACTCGCAGGCCTCGGGCAGACGACAAGCCGGCGCATGGGTCTATGCTGCACCAATTGCGGGACTCAAACCACGACTCTCTGGCGAAGAAACAATGAGGGAGAGCCTGTATGTAACGCGTGTGGACTGTACTTCAAGCTGCACGGAGTGAACCGTCCCTTGGCCATGCGCAAAGATGGCATCCAGACTCGCAAGCGCAAGCCCAAGAAGTCCTCCAGTGGCGGCAGTGATGCCTTGCCTTCGACGTCGACCTCTGGCAACAGTAGTCAGGTCAACGAAATGAAGAACTCCTCAAGCACCGGCATGGATCGAGAGGAACGGCCCTACTTAGGTCACACAAGTCTACTACCAGCGGTGAAATCAGAGCCTGCATACTCAGCAGAACACTCTACCCAAGACCCATTCAGCAGCTACTCAGCAGCTTTCTCTCAGCAGCACCACCATCAACTGGGCTTTGGGTTTCCCAGTAGTACATCCTCTACTGACCACTACCATCATCATCCACACCATCATCACCATCACCACACTCCCTCCGTCCACAAACTCATGGCTACTAGTTAA
Protein Sequence: MFHGAASATPSANYNSDTNNTGYSQQPVYVPSNRVFQWNSPYNSSSTQNSTWHPQSTSSHHDHYPATHSQSPHFPNSFYAAQTTMMWRTYDPSFQRSLPYDEAMQFQLGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPTKRLAGLGQTTSRRMGLCCTNCGTQTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSSSGGSDALPSTSTSGNSSQVNEMKNSSSTGMDREERPYLGHTSLLPAVKSEPAYSAEHSTQDPFSSYSAAFSQQHHHQLGFGFPSSTSSTDHYHHHPHHHHHHHTPSVHKLMATS*

Sequence clustering based on sequence similarity using MMseqs2