Basic Information

Insect: Empoasca onukii
Gene Symbol: hb
Assembly: GCA_018831715.1
Location: CM032059.1:79026794-79030687[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0061 0.61 11.9 0.4 2 23 225 247 224 247 0.96

2 8 0.36 36 6.3 1.6 2 23 252 274 251 274 0.96

3 8 0.011 1.1 11.1 1.7 1 23 308 330 308 330 0.99

4 8 0.0041 0.41 12.4 3.1 2 23 338 359 337 359 0.97

5 8 0.00019 0.019 16.6 4.5 1 23 365 387 365 387 0.99

6 8 0.12 12 7.8 5.0 1 23 393 417 393 417 0.93

7 8 0.19 19 7.2 0.1 1 23 696 718 696 718 0.95

8 8 0.054 5.3 8.9 2.8 1 22 724 745 724 748 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0061	0.61	11.9	0.4	2	23	225	247	224	247	0.96
2	8	0.36	36	6.3	1.6	2	23	252	274	251	274	0.96
3	8	0.011	1.1	11.1	1.7	1	23	308	330	308	330	0.99
4	8	0.0041	0.41	12.4	3.1	2	23	338	359	337	359	0.97
5	8	0.00019	0.019	16.6	4.5	1	23	365	387	365	387	0.99
6	8	0.12	12	7.8	5.0	1	23	393	417	393	417	0.93
7	8	0.19	19	7.2	0.1	1	23	696	718	696	718	0.95
8	8	0.054	5.3	8.9	2.8	1	22	724	745	724	748	0.90

Sequence Information

Coding Sequence: ATGATTTTGTCAGCGGAGTACAGCCACAGCCCTCACCAGGCCAAGATGGCGGCCAGTATGCTGCACTCTCCCCACAACGCGCACTCCTTGTATGCCGGCTACCTCAGCATGGACCCCTCCTGGCACCACCCTGCACCTCAGCCTCAGCACATGTCGGGCAGATCCGAGGACTCCGGCCACGGACACGAGCAGACCAACGCAACTCTGGGAGTCCTGGCGCGGCCCATCATGGCGTCCAGTAGTCCCCGGCAGTCTCCCCTCAGCAGACTGTCCCCCCTGCAGCAGCAACTGTCCCCACAGCAGCGGCAACTGTCTCCGCAACACATGTCCCCTCGCGAGGAGGTGCAGACTAACGCGTCCCTGGGTGTACTCGCTCACCCAGTCATGATCAGTCCGCGGCAGTCACCTTTAAGCAGATTGTCCCCTCTGCAGCCAGTCATGCAGTCCCCACAGTCTCACAGCTCCCCGCAGAGACAATCCCCTGCCCAGCTGTTGGACAAGCCCGCAGATGACAACAGCCGCTCGTCTGTTAGTTCGGCTGAGATGGATCTCTACTACGACAACCCGCTGAAAGGTCTGCAGATGGCTCTACAGAGGCGAGGCATGATGGAACCTATGCCCAGTCATATACTCACACCGCCAGAGCAACCGGCTAATGGAGAGAAACCTCTGCAATGTCCTCTCTGCCAGTACTCTACTACTATCAGGAGTGCTTTTAACAGTCACTTGATGAGAGAGCACGGAGAGCAAGTAAGCTGTCACCTTTGTGACTTCACAGCAGAAAACCACATCCGATTGAAGGAGCATCTACGTGTAGAGCATGATACAACCCTCGCTCCCGAGGACGAGACTGCGTGGATGGATGAGGATGAGGCAGGAGTCACTACGCCCAAGGTCAACAGTCAAGGCAAGGTGAAGACTTACCGCTGCAAACAATGTGAGTTCTCCACCGTCACCAAGCTAGACTTCTGGGAGCACACAAGGAGCCACATTAAACCTGAGCGTCTCCTCACATGTCCCAAGTGTCCCTTCGTCACAGAGTACAAGCACCATCTGGAGTATCATCTGCGTAACCACTTTGGCTCCAAGCCCTTCAAGTGTGACAAGTGCTCATACTCGTGTGTCAACAAGTCAATGCTCAACTCACATCTCAAGAGCCACAGCAATGTTTATCAGTTCAGATGTTCGGATTGTGCTTATGCAACCAAGTACTGTCATAGCTTGAAGCTACATCTGCGCAAATATGGACACAATCCTGCAATGGTTTTGAACCCCGATGGATCTCCTAATCCACTGCCTATTGTTGATGTATATGGTACAAGAAGAGGGCCAAAACGCCCAAAGAAGCCGGAAGATTTTTCTTCTACTCAACCTCCTACTCTGCAAGGGATGCAATCAATTTTCCCACCTTATGGATTTCTTCCTAGTCAAGCAATTTCTTATCCTTATGGCACACTTTTAGGTAACTTTCCTAGGTCCCCTCTTCTGCCATTTTCAAATCCTCCGCCAATCATGCAGGAGGAGTCTACACAATCTAAATCAgagaacaatttatttaatgcaACAATCAATACCATTCAGCAGTCCGCAATAAACAATAATCAGGAAGGCgtaaaagaatatttgacaAGAGTTATAACTACCCAACAAGAAATCATATCAAGGACTCTAGAGAATGAAGAAGAGCCGTTGAATGCTTCTGCAGGAGCTCCTCTGGATCTAAGTAGACAAGAGCACGATCATCAGGAACCAATGTCAGAGAGCTACAGTGACCAAACTCCCGACCAATCGGCAACAATCAAGAACAGGAGAAAAGGTAAAGCTTTCAAGTTGGAGAGAATTGCTCAGAGACTGCAACACCAAAGTTCGGACGAGGAGGATTGCCAACCGAGCCCCAAGCAGCTGAGGTTCGATCTCTCCCCTGAGGCAAAGACAAGCGCAGACAGAAGATCTCCAGCTAGAGACAAGTCCCCGGAACCAACCAGTCCTTCTGCAAAGGTTGACTTTTGCATTGCAGCAAATGAAGAGTTCAGGTCAACCATTTCAGAGGAGAGGAAAACCCGCTGGCGAAATGTTAAagagGTTTATGACTGCGCATACTGTGACATGCTGTTCGGTGACTTGGTCATGTACACGATGCACATGGGCTATCACGGCTACCAGAACCCTTACACGTGCAACCTGTGCGGCCACAAGAGTTCGGACAAGGTCCAGTTTTTCCTCCATCTCTTCAGGTTCGCACACAACTAG
Protein Sequence: MILSAEYSHSPHQAKMAASMLHSPHNAHSLYAGYLSMDPSWHHPAPQPQHMSGRSEDSGHGHEQTNATLGVLARPIMASSSPRQSPLSRLSPLQQQLSPQQRQLSPQHMSPREEVQTNASLGVLAHPVMISPRQSPLSRLSPLQPVMQSPQSHSSPQRQSPAQLLDKPADDNSRSSVSSAEMDLYYDNPLKGLQMALQRRGMMEPMPSHILTPPEQPANGEKPLQCPLCQYSTTIRSAFNSHLMREHGEQVSCHLCDFTAENHIRLKEHLRVEHDTTLAPEDETAWMDEDEAGVTTPKVNSQGKVKTYRCKQCEFSTVTKLDFWEHTRSHIKPERLLTCPKCPFVTEYKHHLEYHLRNHFGSKPFKCDKCSYSCVNKSMLNSHLKSHSNVYQFRCSDCAYATKYCHSLKLHLRKYGHNPAMVLNPDGSPNPLPIVDVYGTRRGPKRPKKPEDFSSTQPPTLQGMQSIFPPYGFLPSQAISYPYGTLLGNFPRSPLLPFSNPPPIMQEESTQSKSENNLFNATINTIQQSAINNNQEGVKEYLTRVITTQQEIISRTLENEEEPLNASAGAPLDLSRQEHDHQEPMSESYSDQTPDQSATIKNRRKGKAFKLERIAQRLQHQSSDEEDCQPSPKQLRFDLSPEAKTSADRRSPARDKSPEPTSPSAKVDFCIAANEEFRSTISEERKTRWRNVKEVYDCAYCDMLFGDLVMYTMHMGYHGYQNPYTCNLCGHKSSDKVQFFLHLFRFAHN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -