Basic Information

Insect: Empoasca onukii
Gene Symbol: -
Assembly: GCA_018831715.1
Location: CM032059.1:67022024-67044544[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.38 37 6.3 2.6 1 23 178 201 178 201 0.97

2 14 0.0003 0.03 16.0 4.1 1 23 254 276 254 276 0.97

3 14 1.2 1.2e+02 4.7 0.8 1 20 292 311 292 313 0.92

4 14 0.33 33 6.4 1.4 1 14 350 363 350 373 0.84

5 14 1.9 1.9e+02 4.1 1.9 2 23 381 403 380 404 0.92

6 14 1.3 1.3e+02 4.6 1.8 3 23 411 432 411 432 0.93

7 14 0.00016 0.016 16.9 1.7 2 23 480 502 479 502 0.96

8 14 0.12 12 7.8 0.1 3 21 811 829 810 830 0.94

9 14 0.23 23 7.0 0.9 3 21 1108 1126 1106 1127 0.92

10 14 0.79 79 5.2 0.4 2 20 1144 1162 1144 1164 0.92

11 14 3.5 3.5e+02 3.2 0.4 2 23 1522 1544 1521 1544 0.87

12 14 0.1 10 8.0 0.0 1 23 1575 1598 1575 1598 0.95

13 14 0.01 1 11.2 0.1 1 23 1749 1772 1749 1772 0.96

14 14 0.018 1.7 10.5 0.7 3 23 1817 1838 1816 1838 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.38	37	6.3	2.6	1	23	178	201	178	201	0.97
2	14	0.0003	0.03	16.0	4.1	1	23	254	276	254	276	0.97
3	14	1.2	1.2e+02	4.7	0.8	1	20	292	311	292	313	0.92
4	14	0.33	33	6.4	1.4	1	14	350	363	350	373	0.84
5	14	1.9	1.9e+02	4.1	1.9	2	23	381	403	380	404	0.92
6	14	1.3	1.3e+02	4.6	1.8	3	23	411	432	411	432	0.93
7	14	0.00016	0.016	16.9	1.7	2	23	480	502	479	502	0.96
8	14	0.12	12	7.8	0.1	3	21	811	829	810	830	0.94
9	14	0.23	23	7.0	0.9	3	21	1108	1126	1106	1127	0.92
10	14	0.79	79	5.2	0.4	2	20	1144	1162	1144	1164	0.92
11	14	3.5	3.5e+02	3.2	0.4	2	23	1522	1544	1521	1544	0.87
12	14	0.1	10	8.0	0.0	1	23	1575	1598	1575	1598	0.95
13	14	0.01	1	11.2	0.1	1	23	1749	1772	1749	1772	0.96
14	14	0.018	1.7	10.5	0.7	3	23	1817	1838	1816	1838	0.93

Sequence Information

Coding Sequence: ATGCTCTACAATGGAAACTCAGTGCAGAAAGTGAGGACCCAATCATGGAACCGCTGTAACAAAGCTGGCACCTTGAACCAAGTTGTGAGCAAGCTGCTAGCGAGAAACGACGTGACCGTTGAGTGCCTGCAAGTCAGCGACCCGATCTGTGATAGCCCCATACCAAAGCCCTCAGTCCTCGCAACAGTCCCTTCCCCCGTGCTCAACAAGCTCAAGAAACTGGGCACTTCGGTAGAGTTGGAGAAACCGAACACTGTGCCTCTACCGTTGATCGACAGTCAAGGCTCTCGTGTCGACACCGTTCCGCCAGGCTTCCGTCAGATCATGGAGTCTCTAGACAAAGCGGTGGATCTCACCTCTGACCTCACCAAGAAAAAGAAACGCCGATCAACTAAGAAAGACAGTAATAATCAAGTGCCTTCCCTTGACCTGCAACTTTTAGCTGATTTAGAAAATAGTGACCATTTAGCCAAATTTACTTTCAAAGTTGACACCACTCAGGTGATTGAATTACCGGAGGGACAGAAGTTGTTCACATGTGATATTTGTTCGGGGGTTTATCACAGAGGGTTTAGCCTGAAACGACATTACTTGAAGACTcatataaactacaaacacatCTCGAAGAGGGACCTGCATAATTGTGGAATTTTAATAGATCCTTCAATCGAGAAAGGAGGTCCTAGGAAAAGATTGGCAAAAGATGATAGCCTGCAGGTGGTTTCAAACCTGTCTCCTCCTAGTGATATCGAGGACCTCTATCGTTGTCATTCTTGTGGCAAATGTTTCATGACGATCTCAGACCTCAAGACTCACTTGATAGAGCATCCTCCAGTATCTGTTCAGAACCTGAACGATAACCAGTACAAAAACTATTCCTGTCCTAACTGCAAAGCTCGTTAccagaaaaaaaaactattccTACAACACAAAGAAGTGTGCGGTGTTGAAGTTCCTCCTGCACCATTAGCTGCTATTCAAGACAAAAGTCCCAAAAAAGTCAAAGAAATCAAAGTCAACAAAAATGCATTGGAGGCTACAGAAAAACACTTTTGCACTTATTGTGACAAGAGTTTTGATACCCTCAATCAAAGAAAGTTCCATAACTTACAAATGCATCACCCTAAAAAGAAATTACAGCAGTGTTacctttgtaaaacaaaaatgttcaagGACAGACTTGCTCTAGTAAAACACCTCATACTTCATCATCCGGACGAATACATCGGCTGCCTTACCTGCAAAATTCGGTTTGGAAGTAGAGAGGAGTTTAAGAAACACAATAAGGAAAACCACAAGCCACTAGGGTCTGCTAAAAGACTACTACTGAATCAGATGAACACTGCTAAACCTCTAGAAGAGTCCAGCAATGAAATCAAGCAACTACCAGAAAATAAAGTCAAGACTGATACTAGTTACAATCCCAATTTAAATTGGAAATGTCCAGAGTGCCCTAAAATGTTTGCTTCTCATTTAAACATGACTCGGCATCATCGAATCGCCCATCGTTTAGTCAAGAGGAAAAAGCAGAGAGAAAAATATTTACCGAAGAAAAGAGTCTTAGCTACAAACAAGCCGATTGAGAATCAAATAGTGCCAACACCAAATCCCAGTGCCGTTCCTCTGCCAGTAGTTGcccccccaccaccacctcctGATCCGGAAGTACTGTTCTACAGCACTGTCGCACTCAACATCAGGGAGAACCTAACCCATCATCTAGACGGCAAGCTAGATTCACAAGAAGTCATGGAATATGATTTGAACAAGTCTGACGCAGAGgctaaaaacaacaaagtccTCAACTTTTCAGCCTCTTTTTCTTCTGAAAATGTCGCACCGTCTCAGCCTGAAGCTACGAGCACTCCGATACAACTGAAAGAGCCAAGGTTTGTTCCTATCAGTCCTCGAGGTCAGTGGGAGAAGTTCAACTTCCCGAAGAATTACGACGGGAGATGTGGTCTGACATCCTATGTCAAAGACATGTCACACTTGGATATCTCCACTCAGCTGACCATGAGACGCAACTTGCAACGCCTCAACTCCACTGCAGGAACCGAGTCTAACAAAGAGTCTCCCGCTAACATTCCTGCCGGACTTCTGTTGGTGGAGAAGCCAGCCCCAGACTGTGCAGAAACCTTCGGGAACCCAGAGGATGACAAAGATACAGgAGCCGCGGAGACGACCGAGCTGAGCGGTGAGTGGGTGAGACCCCGCAACTTCTTGTGTGCTGCTTGTGGCTACAAGTCCACTAACTTGTGGGACACCGAGGATCACAAGTACGCCATCCACCTCAACGCTTGGGTGCCGCACCTCGACGTAGTGGGCCAACAGTCGAACGCAGCGTGGGACTGGATCTACCACCGACGACTGCCGCAAGAGACTACGGTGGAGATGGTGGGTCCCGCCCGACCGGGCTTGCCCCCGCCCTGCAGCAAGTGTGGCCGGGCCAGCAACAGCTACCCGGACCTACACTGGCACATGCTGGACTGTGGTGGGGACATCACCTGGCAGGCCACTATGTTAGGCGTAACGAGTCCAGGATCGAGAAGGCGCAAGTGGAGGCCGTTCGGCAGTCGCAAACGCAAGCAACAAGGCAAACGCATGGTCAAGCGTAACATCCCCAACACACCGGCCAAACACGTCTGTGGTCGCATCCGCACCAAGCCTGGCGACATGGACACAATTCAGAAAATGATCGCTAACTTGCCTGCTAAGAGAGCGACTCGACGTGTACTGGGCGACGAATTAGAGCATAAAACTCGCACTCAAGTCTCTATCAACAATACTCTAATTTCTTCTCTTTCAAACACTCATCATGCAAACGGAGCGAAAAAACCAAAACTTGGTAGAGGACGCCCAAGATTGCACGGTCAGAAAAATTGGAAAGCCAATGAGGTCcaagaagaagaaaatacaaGAAAAGCAGAGAATGTAGAAGTGAAAGTTGAATCTGTAAATGATGAAGAGATTAAAGAGGAACCAAATGAACTAATGGAACCGATGGAACCTGAAAATATGACTCAACATTCTGATATTTTGACCAGCTTGCAAATGATACCAGTTGTGAGGAAGAGTACAGACACGCCTGTCATTGAAGAGTCTGTAGCTGAAGAACCAATCGAGACCTCTAAAATAATAGCTGCTATGAGAGAAGCTATGTTAGTTGCAGAGGAAATGATAGAAAGCAAGCCTGCACAAAAAGTAGAGAAAAAGAGGAGAGTGAAACGAGAACTAAAGGAATTAACAGATGGGAAAACCAGAAGGCCAGATTCAACTATAAATACAACCAACGCAGGAACTGAAAAGATGATAATAATATGCAACGGTTGTGGCATGCAGTTCGACAGCAGCTCAGCTTGCCAAAGACACAAGAAAAAGTGTGTTTATTGGAAAGAAGATAAAAACAATGcaggaaacaaaacaaacagatgTGTCCATTGTGACGCGGTGTTTCCTTATCTGATGGCTCTGTTGAAGCACAGCTGTATGAAAGCAGATGCAGCAGACGAGCCGGCGATGCCAGAACTCTGCCCTGAGGGACTGGTGGAGTCTGTGCAAGGCAACAGTGTAGAGGACATCCCCATACTCTCCCCAGCAGAAGTAATCCGAGACGATGAACATGCCAAGAGACTAAGTCACATCGAAGCCACCGTCAACCAAGTAGGCACTGAATCATTTGATGTCACCGGATACTATGATCAATTCATGCGACATACTTCGGAAACAAGTCACAATGTATCACTAACAGACAAAACCGATGCGGATCCAGCATCGAGTATTATTCCAGGAACTGCTCAAAACCAAAAGTTGTTTGGTCAGGAAATGGTTTACAGTAAGAGCTGTTCTCCCAAGAGAAGAAACAGCACAGGTCACCATGAAAACAACAAGAAACCCAGCGTTGAGGTGGAGGAAGAGACTGATCCGATGAAGTACTTGATGCATCATTTGAAACAAGAGGAGGCTGTCAAAGAAGGAGACCAGCAGACTGAAGAGAAGAGATCGACCGGAGCAGAGTGGCCGAGTGTTCCGCAGCCGCAGCAAGACTGGAACCCGTTGCCGTTGCCTCTGTGGGAGTCGGGGCTGCAGACTTGGGACGCAGACAGCTACTCGACGAGCTGCAGCAGTAGCATTGGGTCCATCATGGACACAGTCAACAAGTTGCTGTCAAGTGACCAAGAGTTGGCTTCGCCGAGCCTAGGCAATTACACGTGGTCAGACCTGCAACTTGCGATGGGAGCTAGTGACGAGGAAATGGCCATCTTGGAGCAGCTGGGAGAACATACTCTACAGGAGGAATATGTGTACGACAGTTCTCGACCGCTGGAAGCATGGCCGTTGGCAGACGACAGTCACACCCTGATGGACTTGGACCATCCGGAGAGCAGCTCATCCCTGCTCCCCCTCGCCTCACACCCTTCTCCCACTACAAGTGTGACGGCTTCTTCCAGCGTAGACTTCACACAGCCCTCCACCAGTGACACAGAGGAAATTAAGCTCTGTAGAGGAGCTCAAAACCAAAAACCGAAAGAGCTGTTGGCCGACTATGACAGCAAAGAAATGGTCTGTCCCACGTGCAACAAACACTACCTGGGACTGACGGCTCTGAAGACTCATGTGTCTTGGTCCCACTGCACCCCGACTGTGAGCTCAACTTCTAAGGGAGGCAGTGGTCAGAAAAGGCGAGCAGCCATGTTGAGCCAGGAGGAAGGCGACCGACGCTTTGTGTGTTTCATCTGCAAGGAGATCCTACCTTCGGCTACTCTCTTGGAGTCACACATTCAAGCCCAACATGCGAAGAAAACTGACAACCAGGAGGCAGCTATTCCTTCGGAATCTGCAGAGAAGCTGCGCAGTAAGATGTCCCTGGCTCTCGGCAGCCTTGTAGACCGTGCGTTGAACAAACTGATCGGATGCAAGCTGACACATGACCCTACGAGCAGTCAAGTCACTCCGGCCACTCAGGCTGAGTCGACCCACTTGAACTCGGAACTGATACAGCTGGTGAGCAGAGTGAGGAGTGGGCGGGAGAATGTGAGCATGTTGGCGTCAGAGTTGAGACATGTGCTCGGCCGGCGTCCCTTGCCCGGCAGTGTGGCAGTGAGCAAGGAAGCACTGAGGGAGAGTGTGACTCAAGAGATAAGACCTACCAACCTGCTAGACCAGCTGACTGTCAAGGATGTCAAGCCTACCAACCTGCTCGACCATCTGGCCGTCTGCAGCAGTGATACTCAGGAGCGGCCCTATCCGTGTCCCATCTGTGAGCTCAGgtTCATGATGCCAAGTACACGCAACCGACACATTGCTCGAGCCCATGTCAAGTATGGCCAACGCTACGAGAAAGAGTTTGAAGACTACCAGGGCCAAGAGTGTTACGATAATGACTGGAAGGAGCATTTTGATTCTGGTTTGGATGCTAATGAAGATGATGGGGAAATGTTACCTCTTTGTTCAGACTGTGGACTAAGTTTCAAGACGATTCATGAAGTAAGACAGCATAGAATCGAGGATCACCCGAGAAGATTTTCAGCTGATGATTCTCAAGACAGTCGGTCAGGACATCCAGAGACCAATTCTGTAGTGGAGTCGAGTTGTGAAAACGAGAACTCTTTAGAATGTTCCAccgaaaaaataaaacttctacCACTGAGTGATAACGCTGTGGATTCCACTAGTTCGGTCAAGAAGAAGATGGGGCGCCCTGCAAAGAAGAAAAGTTGTCGCTCACTCAAGAGAAAGTTGTCTGATTCTGAACAGAACAGCATTACTGtaagaaaactgaaaatagACAAAAATGAATCGAGTTCTGAAAAGACTGAAGATGACGACACGAGCAGAGAAGTGTCTTTTGATTCTGAAATGAGCTCGGAACTTAGTACcaaaatagaaatgaatagcccAGAAATTGATAAACTCTCTGAAAAGAGTGACAAAACTTCAATCAGCATCAACAGTTCTGAAGAAAATCTTGCCGAACTGTCAAAGAAGTTGGATCGTAGAAAGATCACTCGTATGGGGGTTGGAAATTTACCGGAAGAAGCGGTAAGAGTAAAAGCGGAAGCTGCTCTGCGAGAGTTAAATCTCTCCCGGAAAAACAAGACGACTCCGTCTCCCACAAAATGGGGTGTTCATTCAATGAAATTCACAAAGGCATCTCCCACGGGAGTATCATCTAGTCAGGTTAATGGTTCTCCTTCAAAACCAAGGTTCACGTCACTGGTTGACAAGAAGTGGAAAACATCTCCGACCGCGATCGAGTTGTTGACCCCAAAGACCGAATTGACTGTGGAAGCTAACGATATTTATGACTTTCAAGATGAAGAAGTAGATTTGAACAAGAAGATGTTTCAAGAGCATAAGGAGACTCCCTCGACAGGACAATCCACCAACTCCAACTCACCAGGTCCGAAGAAGGCACCTAAATATAGCAAAAATAATTCttga
Protein Sequence: MLYNGNSVQKVRTQSWNRCNKAGTLNQVVSKLLARNDVTVECLQVSDPICDSPIPKPSVLATVPSPVLNKLKKLGTSVELEKPNTVPLPLIDSQGSRVDTVPPGFRQIMESLDKAVDLTSDLTKKKKRRSTKKDSNNQVPSLDLQLLADLENSDHLAKFTFKVDTTQVIELPEGQKLFTCDICSGVYHRGFSLKRHYLKTHINYKHISKRDLHNCGILIDPSIEKGGPRKRLAKDDSLQVVSNLSPPSDIEDLYRCHSCGKCFMTISDLKTHLIEHPPVSVQNLNDNQYKNYSCPNCKARYQKKKLFLQHKEVCGVEVPPAPLAAIQDKSPKKVKEIKVNKNALEATEKHFCTYCDKSFDTLNQRKFHNLQMHHPKKKLQQCYLCKTKMFKDRLALVKHLILHHPDEYIGCLTCKIRFGSREEFKKHNKENHKPLGSAKRLLLNQMNTAKPLEESSNEIKQLPENKVKTDTSYNPNLNWKCPECPKMFASHLNMTRHHRIAHRLVKRKKQREKYLPKKRVLATNKPIENQIVPTPNPSAVPLPVVAPPPPPPDPEVLFYSTVALNIRENLTHHLDGKLDSQEVMEYDLNKSDAEAKNNKVLNFSASFSSENVAPSQPEATSTPIQLKEPRFVPISPRGQWEKFNFPKNYDGRCGLTSYVKDMSHLDISTQLTMRRNLQRLNSTAGTESNKESPANIPAGLLLVEKPAPDCAETFGNPEDDKDTGAAETTELSGEWVRPRNFLCAACGYKSTNLWDTEDHKYAIHLNAWVPHLDVVGQQSNAAWDWIYHRRLPQETTVEMVGPARPGLPPPCSKCGRASNSYPDLHWHMLDCGGDITWQATMLGVTSPGSRRRKWRPFGSRKRKQQGKRMVKRNIPNTPAKHVCGRIRTKPGDMDTIQKMIANLPAKRATRRVLGDELEHKTRTQVSINNTLISSLSNTHHANGAKKPKLGRGRPRLHGQKNWKANEVQEEENTRKAENVEVKVESVNDEEIKEEPNELMEPMEPENMTQHSDILTSLQMIPVVRKSTDTPVIEESVAEEPIETSKIIAAMREAMLVAEEMIESKPAQKVEKKRRVKRELKELTDGKTRRPDSTINTTNAGTEKMIIICNGCGMQFDSSSACQRHKKKCVYWKEDKNNAGNKTNRCVHCDAVFPYLMALLKHSCMKADAADEPAMPELCPEGLVESVQGNSVEDIPILSPAEVIRDDEHAKRLSHIEATVNQVGTESFDVTGYYDQFMRHTSETSHNVSLTDKTDADPASSIIPGTAQNQKLFGQEMVYSKSCSPKRRNSTGHHENNKKPSVEVEEETDPMKYLMHHLKQEEAVKEGDQQTEEKRSTGAEWPSVPQPQQDWNPLPLPLWESGLQTWDADSYSTSCSSSIGSIMDTVNKLLSSDQELASPSLGNYTWSDLQLAMGASDEEMAILEQLGEHTLQEEYVYDSSRPLEAWPLADDSHTLMDLDHPESSSSLLPLASHPSPTTSVTASSSVDFTQPSTSDTEEIKLCRGAQNQKPKELLADYDSKEMVCPTCNKHYLGLTALKTHVSWSHCTPTVSSTSKGGSGQKRRAAMLSQEEGDRRFVCFICKEILPSATLLESHIQAQHAKKTDNQEAAIPSESAEKLRSKMSLALGSLVDRALNKLIGCKLTHDPTSSQVTPATQAESTHLNSELIQLVSRVRSGRENVSMLASELRHVLGRRPLPGSVAVSKEALRESVTQEIRPTNLLDQLTVKDVKPTNLLDHLAVCSSDTQERPYPCPICELRFMMPSTRNRHIARAHVKYGQRYEKEFEDYQGQECYDNDWKEHFDSGLDANEDDGEMLPLCSDCGLSFKTIHEVRQHRIEDHPRRFSADDSQDSRSGHPETNSVVESSCENENSLECSTEKIKLLPLSDNAVDSTSSVKKKMGRPAKKKSCRSLKRKLSDSEQNSITVRKLKIDKNESSSEKTEDDDTSREVSFDSEMSSELSTKIEMNSPEIDKLSEKSDKTSISINSSEENLAELSKKLDRRKITRMGVGNLPEEAVRVKAEAALRELNLSRKNKTTPSPTKWGVHSMKFTKASPTGVSSSQVNGSPSKPRFTSLVDKKWKTSPTAIELLTPKTELTVEANDIYDFQDEEVDLNKKMFQEHKETPSTGQSTNSNSPGPKKAPKYSKNNS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -