Basic Information

Insect: Empoasca onukii
Gene Symbol: ZFX
Assembly: GCA_018831715.1
Location: CM032059.1:76986873-76987781[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.8e-05 0.0018 19.8 0.9 1 23 12 35 12 35 0.98

2 10 0.00083 0.082 14.6 1.5 1 23 41 64 41 64 0.97

3 10 0.0011 0.1 14.3 0.9 1 23 70 93 70 93 0.96

4 10 1e-05 0.001 20.6 0.7 1 23 99 121 99 121 0.97

5 10 0.0011 0.11 14.2 0.5 1 23 127 149 127 149 0.97

6 10 0.013 1.3 10.9 1.0 1 23 155 177 155 177 0.97

7 10 0.00011 0.011 17.3 0.9 2 23 184 205 183 205 0.96

8 10 0.00035 0.035 15.8 0.4 5 23 215 233 214 233 0.95

9 10 7e-05 0.0069 18.0 1.4 1 23 239 262 239 262 0.98

10 10 0.029 2.9 9.7 0.5 1 23 269 292 269 292 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.8e-05	0.0018	19.8	0.9	1	23	12	35	12	35	0.98
2	10	0.00083	0.082	14.6	1.5	1	23	41	64	41	64	0.97
3	10	0.0011	0.1	14.3	0.9	1	23	70	93	70	93	0.96
4	10	1e-05	0.001	20.6	0.7	1	23	99	121	99	121	0.97
5	10	0.0011	0.11	14.2	0.5	1	23	127	149	127	149	0.97
6	10	0.013	1.3	10.9	1.0	1	23	155	177	155	177	0.97
7	10	0.00011	0.011	17.3	0.9	2	23	184	205	183	205	0.96
8	10	0.00035	0.035	15.8	0.4	5	23	215	233	214	233	0.95
9	10	7e-05	0.0069	18.0	1.4	1	23	239	262	239	262	0.98
10	10	0.029	2.9	9.7	0.5	1	23	269	292	269	292	0.95

Sequence Information

Coding Sequence: ATGCATTTGAGAATCCACAGTGGGGAAAAACCTTATCCATGTTTATATTGTGATTTAAAGTTTGCTGGAACTGGCCACCTGAACGCACACATGAGAAGAAAGCACTTAGGAATCAAACCTTACTGTTGCCCCAGGTGTGAGTACAAGACGGCAGACGGCAGCAATCTAAAAACACACTTGAGAAACGTACACAACGAGCAAAAGCCATATGCGTGTTTCAAGTGTGGCTTCAAATTCGAACTgaaaaatgccttaaaactgCACATTTTACGCACCCACGTCGAAGAGAGGCCTTTTGCATGTAACATGTGTTCAATGAAATTTGCAAGACTCAAGTATCTAAAGGCACACATGAATGTGCACACTGAGGACAAACGTTATTCTTGCGATCAGTGTGAATACAAGACTGCACGGAAGTATCAACTTGTAGTTCATTCAGCTACGCACAGTGTCGACAAACCTTTCACCTGTAACCAATGTGATTATAAAACAGCTCTTAAAAAATCATTGGATGTTCACACGGCTAAACATGAGAAGAAGAAAGAATTAATGTGCAGTGTTTGCGATTATAGGACAGCGGAAAATTGCAATTTGAGGGCTCACATGAGAATCCACACGGGTGAAAAGCCGTACGCTAGCACGCAATGTGAATACAGGTCAGCGGACAATAGTAATCTCAAGTCACACATGAGAACTCATAGCGGAGACAAGCCGTACTCGTGCACTGTGTGTGAGTACAGGACAGGTGACAGCAGCAACATGAGGTCCCATATGCGGAGGAAACATAGCGAGGAGCAACACACCTTCGCCTGCGACCAGTGTGAGTTCAGGACAGTAGTTAAGCGAGAGTTGGAGAAACATGTGACCAGAACACACGGCGGCGAGACACCGTTCCCTTGTCCACATTGA
Protein Sequence: MHLRIHSGEKPYPCLYCDLKFAGTGHLNAHMRRKHLGIKPYCCPRCEYKTADGSNLKTHLRNVHNEQKPYACFKCGFKFELKNALKLHILRTHVEERPFACNMCSMKFARLKYLKAHMNVHTEDKRYSCDQCEYKTARKYQLVVHSATHSVDKPFTCNQCDYKTALKKSLDVHTAKHEKKKELMCSVCDYRTAENCNLRAHMRIHTGEKPYASTQCEYRSADNSNLKSHMRTHSGDKPYSCTVCEYRTGDSSNMRSHMRRKHSEEQHTFACDQCEFRTVVKRELEKHVTRTHGGETPFPCPH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -