Basic Information

Gene Symbol
-
Assembly
GCA_018831715.1
Location
CM032064.1:16439711-16446439[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-08 4.2e-05 24.8 0.1 1 40 102 142 102 149 0.92
2 2 2.9 5.8e+03 -1.3 0.1 32 45 167 180 158 181 0.75

Sequence Information

Coding Sequence
ATGCCACTTCGCAGCTCCCACCGACTGAAGTCGAAACCGAACAGCCTTCTGTGCCCCCAGAAGAAGTTACTGACATACCCAAGAAGAAACGTGGAAGGCCTCCCAGAAGCAATAGAGCTCCAACAAGGGAGATCAGTGCGCGCTTGCCACATCGCACCACTGCCCGCCCGCGGCACTCACTCCGCACCACACTACACGCTAGTCCAAGCAGACAGTACTTATGTTCTTTTTTATCACGGCGCTCGGCCAAACCAAAGAGCGAAAAAACCTGTAGAAAGAAACGACTGCGTGGAAAAACCCCTTAAAAGGTGTTGGTCAAAAGAGGAAAAACAGCAGCTCATTAAAGGTTTAGAGGAATTTGGTCCCAACAATATCAAAGCTCTCCAGAGTTACTTACCTACAAGAGTTGTCTACGAAATAAGAAAGCAGATAAGGTTTTATCAGAACTTAGCACGGGAAAAACTAGAAAAAAGATTGATAACAGAGAAAAGGTCTTCAAAAAGAGCGACCGTGAATTGCGTCAACAAACTGAATGAGTGGATCAGTGCGTTTAAACATCTTCAGAAGGATTCTCCTACAAAACCATGGGCACtttcaattttctttgaacttgCAGCGGAGTACGGAGAGTTTCCTTCAAAGGAAGAGGTCGGAGGTATAGACTTTCGGGCACTTTACCGCTACATACATTGTATGCTGAACGGTGAACCGTTCTACGGTATGAATCCGGTGACGAAACAAGTGTTGTTGGACATGCTGAAGAATACCGACTCCTTGGCTCAAGAATACATGAGTGCAGGCCTAATAGCACCCGAGTTGCACAATTACCCTGTGCAAAAGGAGAAAGAGATCAAAACCTACGGTAGAACCAAGCCAAAGACACATGTAACAGTGCAAGACATCTGCGACCACCCGGACATGAATCCAATGAGGTTACCTCCGCACATGCTTGAGATGGTTGAAGAAATTAAGCGCAAGTTCCAAGAATAG
Protein Sequence
MPLRSSHRLKSKPNSLLCPQKKLLTYPRRNVEGLPEAIELQQGRSVRACHIAPLPARGTHSAPHYTLVQADSTYVLFYHGARPNQRAKKPVERNDCVEKPLKRCWSKEEKQQLIKGLEEFGPNNIKALQSYLPTRVVYEIRKQIRFYQNLAREKLEKRLITEKRSSKRATVNCVNKLNEWISAFKHLQKDSPTKPWALSIFFELAAEYGEFPSKEEVGGIDFRALYRYIHCMLNGEPFYGMNPVTKQVLLDMLKNTDSLAQEYMSAGLIAPELHNYPVQKEKEIKTYGRTKPKTHVTVQDICDHPDMNPMRLPPHMLEMVEEIKRKFQE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-