Eonu040545.1
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- lola
- Assembly
- GCA_018831715.1
- Location
- CM032067.1:16779509-16802967[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-08 4.9e-05 24.2 0.1 4 41 972 1009 969 1012 0.88 2 2 2.6 6.8e+03 -1.9 0.1 30 40 1052 1062 1052 1066 0.83
Sequence Information
- Coding Sequence
- ATGTCCTCACTGTGGAGGGATATTCAACACACCGACTCAATCGATGGCAGGAAGAAACGCTCAGTGACTCCTGAATCTTCAGTCAAATCTGCGAAGAAGTCTCCAAGCAAGGATGCAGATGCAAGACTCCAAAGTGTCGTTGACTTGACGCAAGACAACTCAACCCCCGATACAGTTCGAGTACCGAAAAGTTTGAAACCTAACCTTGCAAATATCACCATCAAAGCAATTCCTCTAAAGGGCTCAGAGGCGAAGAAAGATTCTATTGGATGTGAAAAAACTTCCGGAGGTCCTGTAAAAACTTTGATAATTCGCTCTGATTTCCAAAGTACGAAGAAAGCACAAGATCGGATTGAGAAACATGCAAACTTGACGATTGAAAAATCAGGGACAAGTTCTAAGAAGCCTTCCAGCCCTCAGTTGGTTGTAGTCCCTTCTACTTCAATCTCTGACTTGAAACTGAAAGAATGCAACATCGTGAAAATCAACAAAGACCAGATCCTCAAGAAAGCGAAAGTAATAACACATCAAAGGAACATTGCAATATGTTCAAAAGAGGGACAACTCAATGTTACCAAAGGGCGGAAAAATATCTCTATGGTAAGTCTCACAAGGTGCAATAAACCTGTAGAAGAAAGTCTTCATGAAAAATTGCTGCAGGGTACAAAAGTTTGTAGTGAAAATGTGGAAATAAGTACACAAATTGATATAGATACTACGAGCGACCAAGAAATAAAGAGAAACGAAAATGGTGAATATGTCTGTGAGTGTGGAACCAGGACAAgtacaaaactattgtttttagcATTGCACGGCAAGTTTTGCACTGCTAGGAAGAAAATTCAAGAAGAAACTGCTAAACAAATGGATATCGAAAAGGAAATCGTAAATAAAGACTGGTCAGCAGAACCCTTGAAAACATACGCTAGGTTCCAACCTCAATCTTCTCCCACTAGGAACACAACCACAACATCACTTGTAACCGCTCCTAAATCCAGCGATACATTGCCTGCGGTTAAATCTCCTAAATTAATTATCACACGTCCCAAAAAATCTGATGGAGGCGAATGCTTCTTTTGCAAAAAGAACGTGCCGCATTTACTCGCTCACAAGCTTGTTTGCCCGGCTAAAAGATGTGACAACTGTAATGCTTTCTTTGCAGACGACATTGCTCTGCATCGGCACCAACATCAAGTACCACCTTGCGTAGCCTCCGAGAAACCTCGCTTTGTCATGTGTCCGTACTGCTTGGAGTCCTTCACCGCGGGCGTTTATTCCATCCACAAGAAGACTTGTGTCCCTAACTTGAAACATAAGAGTGGGGAGTTCCCATGCAAGAAATGCAATAGGATTTACATCTCCAAGGCCTACCTGGAACGCCACGAGTTGAGATGCGATATCGACACGGTCTTAGCGGAAGAAGATGTGAGAGTTTCGCCGTGGGACAATTCGCCAGGGGAAGTGCTGTTCTCAGACATAGGTGATGATACGACGGAAATAGACATCAAAGAAGAGGAGATTCCCGACTACCAATGCCGAACCTTGACTTCGGTGAAAAGCGATACAAGTTACGATATTTTTAGCGATGAGAAATTAGCGGACCAATTAGGAATCATCGTCTCTCACGATCCGAGAGTGAACAAACTGTTAAATTGTGATTACGAAATGTGTACTTTCCGCACATTCTCCTCGAGGAAGTTGAGCAAACACAAATCGAACAAACACGGGAAGCAAAAAAAATCAAATGACGCTGCTGCTGAAGACTTTGCACACCTAAGGTCTCCCGGGAAGTTGAAAGGAAGGGTCGGAGTCCTGTGTTCCAGCTGTGGGAGTGTTACCAGGGTCGGGAAGGAGATCCTCCACAAAGACACCTGTGAAGTCGGCCAGTACATTTGCAAATGCGGCAGAACCTTCCAGCTCAAGCGAGATCTACTAATCCACAAGGTCAACTGCAAAACCCCTCTTCCGAACAAGAAAGGAACTTGCGTCAAGTGTAAGTGTGGGAGCTTTTTCGCCTCCAGGACCAACCTTTCTTACCACATTGGCAAATGCTTCGCCACCAAAGGTGAAAACAAGGAGAAGGTGGTCTGCAAATGTGGGAAGAAGTGTTTGTCATTAAGAGGCTACAGAACTCACAGGAAGTATTGTAATCGCAGCCCAACTCCTCCTGATCAGCCGGAATTTACCTCTTTGAAAATCAGTCCTGTTCGTACAAAAAGCAGAGATACAGTCGATACTAAAGATGAAGACGAGAACAGCGTGAATTTAGTACGgagaaaatcatttaaaaagaaatcattCTCAATCTTAAATTCCGATGAAGACTCGGATGAGGATAATCCCACCATTGATAAACATGTTGAACCGATTGAAAAGCCTGTAAAAGAATTCGAAGTTGTTCGAAGCGATGAAACCAGCTTTAGAGTCGTAGAAAAGATAAGCGAAGAAAATGTTCCCTCTACAAGCAAGAATGCCGACTTGGGCGCTTTGTCCGTCCAATCGGAAAAGAAAACTCCCAAACCCCCCAGACACGTTTCATTCTCTTCCGCCTTTAGCCCTCCTGGTATTGCCTTCATCAGACCTTCGGACCATGCCGAGGCTCTTCATCCAGTTTCCAGTCCTCAACCGCCTGAAGaacaagaaaaattaacaaaagagGATTTGAACGGCAGATACACTCAGTTAAAAGAAAGACAGCCGGGAGTTAGATTGAAATGCAAGTGCAGCAGAGTGTTCAATTCCGTAATAGGCTTCAGGCTACACAAAACGAAAGGTTGcaaaagaaagCAACACCTAGTAGAGAACATCAAAACTACCAGCCCTCACCACCCTCTCAACGCCAACTCAGGTGTGAATTTGACTCCCCACAGAAAACAACCAgACAAGGTTGACAACCGGAAGTACTCCCAGCAACAGCTGGAGAAGGCGGCTGACGCCGTGTTGGTGTACAATGTGGCGCAGAGAGTTGCCTCGAGGTTGTATAACATTCCAAAAACCACGCTGCAGCGCTACGTTACCAAGAGAGAACAGGAGAAATATGGTTTACCGGTGGGCCAGTTCAACATAGACGAGTTGTACTGGAAGTACTTTAACGCAAACGCCGCAGGACAGAAATCAACATTCCGCTGCGACTGCGGCAAGATCTACCCGAGATACACTTCGCTCTGGAACCACAAGAAGTACCGATGCGGCAAACAACCGCAGTTCTCCTGCGAGTTCTGCAACCATCGCACCTGGCACAAGTGCAACTTGAAGAGTCACATGGCGGCGAAACACCCGGAGAAGATGCCGGAGGGAGAAGCGAAGAAAGAACCAAAGATTACGTCTGCGACACCGCCTCAGAACCTGCTGCAGAATATCTTCAACATGATTCAGCACGCTCTGACGAACAAGTCTCAATACCCTAATCCTCAGTACTCAAATAATTTCTACCCTTATCAAAATCAGTTCCAGCAGAGTCAGTTGGAGCAGAATTCGTTCGCGAACTCCCAGCAAGTGCCAACCTCGAGTGGCAACTCTTCCGAAGTCAATTCGCTCTCTTCTTTCATAGCTTCTAAGATGGTCTCCCAGAGTCAGAGTATCCCGCCGCAAAATACTCCCCTACCTTCAGATTTCCCTAAATTACCTCCCGGTCTGACCATATCTTATCAAAAGCATCCGAATGTTGAATCTTCGGAAGTTTCGATACCTAACGCTTCTGAAAATCCTGTGTCCAATTTACCTTGTGAAAGTTCAAATCCGAGTGTTGCATCGGTTGGGAAAGTGAATGAAACTGCGCAGGAAACTGTCACAGGAAAGTTCAAGTGCCAATGCGGGAAGTCGTACTCTCTGCCGACGTCGCTGTACAACCACAAGCTTTACCGTTGCGGCAAGAAACCAAAGTTCAGGTGTACCATCTGCAACCACTTTACCTGGCTCAAGGGCAATCTCAAGACACACATCAAGACCAAGCACCCCGGCCGCAATGTCGACACCAGTCTCGAAATCCCGGGAAGTATCGACGTTAACACCAGTCTCGAGATCCCGGGAAGTATCGACGTCAACACCAGAGGTCCCCAGGAGATACTGAGTTGTGAGCAGTGTGGGAAAACTTACTGGAAGTCCGTCTCACTGTACGCTCACCAAAAATATTACTGTGGCAAGTTGGAACCCTCCTGCAAATGTCCTTATTGCTTTCAGACGCTAGAATTTGGAAAGAGTTTCAAGTGCAACCGTTGCGGGAAGTTGTACAATAAGTACATCTCGATTTATACGCACTGCAAGTTCTACTGTGGGAAGGAAGCTTCGTTTGTGTGCGTACTGTGCGGCTACAAGGCTTGGCAGAAAGTGCACTACAAAACACATGATCAGAAAACATGA
- Protein Sequence
- MSSLWRDIQHTDSIDGRKKRSVTPESSVKSAKKSPSKDADARLQSVVDLTQDNSTPDTVRVPKSLKPNLANITIKAIPLKGSEAKKDSIGCEKTSGGPVKTLIIRSDFQSTKKAQDRIEKHANLTIEKSGTSSKKPSSPQLVVVPSTSISDLKLKECNIVKINKDQILKKAKVITHQRNIAICSKEGQLNVTKGRKNISMVSLTRCNKPVEESLHEKLLQGTKVCSENVEISTQIDIDTTSDQEIKRNENGEYVCECGTRTSTKLLFLALHGKFCTARKKIQEETAKQMDIEKEIVNKDWSAEPLKTYARFQPQSSPTRNTTTTSLVTAPKSSDTLPAVKSPKLIITRPKKSDGGECFFCKKNVPHLLAHKLVCPAKRCDNCNAFFADDIALHRHQHQVPPCVASEKPRFVMCPYCLESFTAGVYSIHKKTCVPNLKHKSGEFPCKKCNRIYISKAYLERHELRCDIDTVLAEEDVRVSPWDNSPGEVLFSDIGDDTTEIDIKEEEIPDYQCRTLTSVKSDTSYDIFSDEKLADQLGIIVSHDPRVNKLLNCDYEMCTFRTFSSRKLSKHKSNKHGKQKKSNDAAAEDFAHLRSPGKLKGRVGVLCSSCGSVTRVGKEILHKDTCEVGQYICKCGRTFQLKRDLLIHKVNCKTPLPNKKGTCVKCKCGSFFASRTNLSYHIGKCFATKGENKEKVVCKCGKKCLSLRGYRTHRKYCNRSPTPPDQPEFTSLKISPVRTKSRDTVDTKDEDENSVNLVRRKSFKKKSFSILNSDEDSDEDNPTIDKHVEPIEKPVKEFEVVRSDETSFRVVEKISEENVPSTSKNADLGALSVQSEKKTPKPPRHVSFSSAFSPPGIAFIRPSDHAEALHPVSSPQPPEEQEKLTKEDLNGRYTQLKERQPGVRLKCKCSRVFNSVIGFRLHKTKGCKRKQHLVENIKTTSPHHPLNANSGVNLTPHRKQPDKVDNRKYSQQQLEKAADAVLVYNVAQRVASRLYNIPKTTLQRYVTKREQEKYGLPVGQFNIDELYWKYFNANAAGQKSTFRCDCGKIYPRYTSLWNHKKYRCGKQPQFSCEFCNHRTWHKCNLKSHMAAKHPEKMPEGEAKKEPKITSATPPQNLLQNIFNMIQHALTNKSQYPNPQYSNNFYPYQNQFQQSQLEQNSFANSQQVPTSSGNSSEVNSLSSFIASKMVSQSQSIPPQNTPLPSDFPKLPPGLTISYQKHPNVESSEVSIPNASENPVSNLPCESSNPSVASVGKVNETAQETVTGKFKCQCGKSYSLPTSLYNHKLYRCGKKPKFRCTICNHFTWLKGNLKTHIKTKHPGRNVDTSLEIPGSIDVNTSLEIPGSIDVNTRGPQEILSCEQCGKTYWKSVSLYAHQKYYCGKLEPSCKCPYCFQTLEFGKSFKCNRCGKLYNKYISIYTHCKFYCGKEASFVCVLCGYKAWQKVHYKTHDQKT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -