Eonu040468.1
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- lolal
- Assembly
- GCA_018831715.1
- Location
- CM032067.1:16296844-16310626[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-05 0.23 12.4 0.0 2 27 527 552 526 553 0.94 2 2 1.5e-07 0.00039 21.3 0.1 14 38 554 579 553 584 0.83
Sequence Information
- Coding Sequence
- ATGGAATGGGAGGAGAGGTGTGGAGAGGAGGATTGGAAAGGAAAGAGAAAGGAGGGAAAGGATGAAGTACTAACCCCAGAGCCTGGTCAGGCCGAGGCCAGGATGGCAGGGTCGGAACATTACAGTCTCAAGTGGAACAACTACCAGAGCACCATGACCTCAGTGTTCCATCACCTTCTGCGCACGGAGGCGTTCGTAGACGTCACACTCGCTTGCGACGACGAGTCTCTCAAAGCACACAAGGTGGTTCTTTCCGCTTGCTCCTCGTACTTCCAGAAGATTCTGTTGAACAATCCGTCGCAACATCCTACGATCATCATGCCCTCCAACGTTTGCTTCACTGACCTCAAGTTCATCATCGAGTTTGTCTACCGAGGAGAAATCGACGTCTCCCAAGCGGAACTCACGTCGCTACTGAACACGGCTAACCAGTTGAAGATCAAGGGACTGTGTGAGCCGCCGAAGGGGGCCAACATGAAGGACATGCCAGGGGCGGAGGTAACCCCATCCCCGCTTCGTCCGCACTCCTCGCCCCGCCATGGTCTCCCGTGCCGAATTCGGTTCTCCTCACAGATTGAAATGCAGCATGTTCAACAACAGCCGCAGACGATTCATCAGGCTCAACAAACCATACACCAACAACAGAACGTGCATCAGGCGCAGCAGAACCTCAACCAACAACAGCAACAGAGTATGCACCAACAACAGCAGACGATGCATCAACACCAGGCTCAACAACAGACGATGCATCAGCATCAGTCTCAACAGTCGATGCACCAGACGCACCATCACCAAACGCAGCAGCAGATGTTGCACCAGACACAGCAGATACAGCACGCGTATACGCAGCAAGAACCGCAGTTGATACAGACTGTTGTAACCTCCATGCACGACCCGCACAGTCCTCACTCGCAGATAACGTCGGATGCGCTGGCGAACTGCATCACAGTGGCCACGTCTACGGACGACGACCTCAAGAACGATGTACAGAGGGTGGTGATCCTAGAGGGTAGAGTTGGACACAACGGACACCTCATGATGACCAGCCCGCCCCCCATCATGACCACGCATGCGATACCTTCCAGCCAGCAAGTAGGTAGTGGTCTAGGAGTAGGTGTAAAGGTTTTGTTAGACTCGTCGGGACTGAGTGTACATTCGGACATGGACTCCCTGACGGCTGAAGTCTCGACGCAGAATACATCCCCGGACCATTCCTTAATGTCTTCCCCTCCCCACCACGAGATGACCGTGATGACGTCGGTGGAGGGACGAGTCACCGTGGAGACGAGTCCGATGAGTCCGCAGGATGATGCTGTGAAGGTCAAGTACGAGACTCTGCGAGCCATGGACCAGTCGGACCCTCTGGACCTGGAGGCACAACTCTCCGCCGAGAGGGAGAACGGACAGTTGCAGTGTGGCAGTGTTGAGGAGGTGGAGACAAAACACACGATGCACACAATGATGATCACCCCGGAGCTGATAGGCTTGATCCCTTCGTCCTCCTCGAGTCAACAAGAGAGCGTGTCGGAGAGCATCAAGCGAGAGGCGGCAGCGGCGGGCGTCAACAAGACCTGGTCTCAGGAGGACATGGACGCGGCGCTAGACGCACTGCGCTACCACACCATGAGTCTCACCAAAGCGTCAACCACCTACGGTATGCAAGGACAGATGAGTATCAACCAGGCGGCCATCCACTACAACCTGCCCTACTCGTGCGGCTGGCACCAGCGTGTCAGGAATGCAGGGACCATCGGCGAGCAGGAGGAGATACCGATACAGACGCACAACATCTCGGCACCGATCATGTTGCTCCAATATCAGCAGCCGACGATATACCAACACACACCGAGCTGA
- Protein Sequence
- MEWEERCGEEDWKGKRKEGKDEVLTPEPGQAEARMAGSEHYSLKWNNYQSTMTSVFHHLLRTEAFVDVTLACDDESLKAHKVVLSACSSYFQKILLNNPSQHPTIIMPSNVCFTDLKFIIEFVYRGEIDVSQAELTSLLNTANQLKIKGLCEPPKGANMKDMPGAEVTPSPLRPHSSPRHGLPCRIRFSSQIEMQHVQQQPQTIHQAQQTIHQQQNVHQAQQNLNQQQQQSMHQQQQTMHQHQAQQQTMHQHQSQQSMHQTHHHQTQQQMLHQTQQIQHAYTQQEPQLIQTVVTSMHDPHSPHSQITSDALANCITVATSTDDDLKNDVQRVVILEGRVGHNGHLMMTSPPPIMTTHAIPSSQQVGSGLGVGVKVLLDSSGLSVHSDMDSLTAEVSTQNTSPDHSLMSSPPHHEMTVMTSVEGRVTVETSPMSPQDDAVKVKYETLRAMDQSDPLDLEAQLSAERENGQLQCGSVEEVETKHTMHTMMITPELIGLIPSSSSSQQESVSESIKREAAAAGVNKTWSQEDMDAALDALRYHTMSLTKASTTYGMQGQMSINQAAIHYNLPYSCGWHQRVRNAGTIGEQEEIPIQTHNISAPIMLLQYQQPTIYQHTPS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00645150;
- 90% Identity
- iTF_00645150;
- 80% Identity
- iTF_00645150;