Eonu026544.1
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- bab1
- Assembly
- GCA_018831715.1
- Location
- CM032063.1:14110322-14115995[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-17 1.7e-13 51.3 0.0 2 45 105 149 104 149 0.96
Sequence Information
- Coding Sequence
- ATGTTGTTCAAGGAGACACCTTGTAAACATCCAGTAGTTTTActgaatgaaattaaatttgtagatttgaagaaaattgttgactttatgTACTGTGGAGAAATAGATGTACCTGATGAACAGCTGGCTGACATACTTGAGGTGGCTGAAACATTGCAAATCAAAGGCCTGTATGATCCTATTAAGAAACAAGAAGAAACAACTGCAAAACGTAAAAGAAGAAAAAGCCAAATAGATTCTGTAAATAGTGAAGATTTACAAGCACAAAAGTCGAAAGGCCAAGTTCGACGCCGTTACAACAAGAGTCACAACAATGGCAACCTCCTAGCAGCAATGGAAGCAGTGAAATCCGGTGCTTTGGGCTTCTGTAAGGCAGCTAAACTGTACGGAGTCAACAACCGGACCCTCTGGTTAGAGTATAAGAAGAGAGGATATAAATCTAAACGACCACCTGTTAGACCAATAAAAAGCACCAATTCAAAACCTTCCTGA
- Protein Sequence
- MLFKETPCKHPVVLLNEIKFVDLKKIVDFMYCGEIDVPDEQLADILEVAETLQIKGLYDPIKKQEETTAKRKRRKSQIDSVNSEDLQAQKSKGQVRRRYNKSHNNGNLLAAMEAVKSGALGFCKAAKLYGVNNRTLWLEYKKRGYKSKRPPVRPIKSTNSKPS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00645195;
- 90% Identity
- iTF_00645195;
- 80% Identity
- iTF_00645195;