Eonu014328.3
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- lov
- Assembly
- GCA_018831715.1
- Location
- CM032060.1:32943891-32953756[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1 1.6e+04 -3.0 0.0 12 23 94 106 93 107 0.81 2 2 2.6e-18 6.6e-15 55.8 0.0 1 44 407 450 407 451 0.96
Sequence Information
- Coding Sequence
- ATGGGGTCGCCACACTACAACTTGCGCTGGAACAACCACCAGAACCACCTGCTCACAGCATTTGACTCTCTGCTGCAGAACGAGACTCTGGTGGATGTGACCCTGATCTGTGAGGAGACCAGCTTCAAGGCGCACAAAGTGGTTCTGTCTGCATGCAGTCCTTACTTTGAAAGAATTTTCTCCGAAACTCCATGTAAACATCCTGTGATAGTTCTGAAAGACTTGCGAGGTTGGGAAGTACAAGCTATCGTAGACTTCATGTACCGAGGCGAAATCAGTGTTGTACAGGAGCAGTTAACATCTCTAATCAAAGCTGCGGAGTCCTTACAGGTCCGAGGATTAGCTCACACAGAAAGAATACCTATGTGCGGTGGAGGAGAGAAAGAGCGAGAACGAGAAAAGGATAGAGAACAGGAGAGGGATCGGGAGCGGGACAGGGAAAGAGAGAGGGAGCGAGAAGGAGCGACTCAAAGTGGAAGTAGTGCTGCGTTTTCTCCAGCTTCTAGCCTAGGAATGTTTCCTCCTCCGTCGTCTGGACAGACCACCATCTCGCCTCAATACAACGGTCCACTGAGACTGCCGCAGCTGCCACACCTTCCCCACATCTCTTTCACTGACCGACACTGCTCTTCCCCCTTGCCACGTCGCAAACAGgCAAGACCTAGAAGAAGGTCAGGAGAAATATGTGGACCTCAAGATCTTACCAAAGGTCCAAATTCTCCTGAGAATGAAACTGCAGAAAACTTATCGGTTAAGAAAAACATCAATAACAACCTACCTCTAAATAGGCCTGCTTCCAGCCCATCGCCTTCTAGTGTAAATAATacaatgaaaattgaaagtgAAGATTCCGATGCTGCAGACTCAAGCCAAAACCAGCCGATGGAGCTGACAACTACGATGTCAGAGAACAGACCTGAGTTGCCCAACACCACTTCGGATCAAATCTCCAGTCTACCACCACCACCTCACGAGTCTTTTGAAAACTCAGCGTTTCCACACATGACTTCCATATCAGCATTGTCTCTAACTCCCCCACACAtgTTTTCACTAGATGCACATTTCGgACTATTCCCAGGAATGGACAGTTGTCGAAATTCCTTCTTCAATGACCTATCTGACCATCGCGGTGAAAATCATCAAATGattgtaaaaaagaaaaTGGGTCGGCCAAAGGGACAACACAGTGCACCTCGAGGAGGTCCTCCGCGATCCTGGACCAATGCAGAGTTGACGGAGGCCCTGCAACATGTGTGGAACAAGAAGATGACAACCTCTCAAGCTTCCCGCATCTTCGGCATCCCTTACAACAGTCTCTTGATGTATGTTAGAGGAAAGTATGGCAAATCACTCAAGCTAGAACAACTTAAAAAAGAGTGTTTCGGAGATTTAGGGGGGCCGTTGGACATTTTAGGAATCAATCCTTTGTCCTCTAACAACAACAATCCTCCTTCTAAACATCATCATAAAGGCCCTGAGCCTGACCTAATGTTGGGCCCTCCAGGATTCAACCCTGGAAATTATCCATCACCTAACTTCTACCCAGACTTTGGTACATCCTTTCCGATGCCTGTCGGAATGGTTCATCTTCTACCTCAATCCGAGAAGAACAGAGAGCATTCTGGGCCCTTGGACTACATCAAAGATGAATACCACAACCAGAGGAATATGCAGAACCCTTTAGACTACGGAAAAGAGGAGGTAAGGAGCAGTCCAGCGGCCTTGGATTTTGCAAAGGAAGAGATGAACCTGCAGAACAACTCCGTAGAGGATGAGGAGAGGGAGAGTCAGACTCCGCAGACGAGACATCATGAGCAGAACGGACAGGACTGA
- Protein Sequence
- MGSPHYNLRWNNHQNHLLTAFDSLLQNETLVDVTLICEETSFKAHKVVLSACSPYFERIFSETPCKHPVIVLKDLRGWEVQAIVDFMYRGEISVVQEQLTSLIKAAESLQVRGLAHTERIPMCGGGEKEREREKDREQERDRERDREREREREGATQSGSSAAFSPASSLGMFPPPSSGQTTISPQYNGPLRLPQLPHLPHISFTDRHCSSPLPRRKQARPRRRSGEICGPQDLTKGPNSPENETAENLSVKKNINNNLPLNRPASSPSPSSVNNTMKIESEDSDAADSSQNQPMELTTTMSENRPELPNTTSDQISSLPPPPHESFENSAFPHMTSISALSLTPPHMFSLDAHFGLFPGMDSCRNSFFNDLSDHRGENHQMIVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGDLGGPLDILGINPLSSNNNNPPSKHHHKGPEPDLMLGPPGFNPGNYPSPNFYPDFGTSFPMPVGMVHLLPQSEKNREHSGPLDYIKDEYHNQRNMQNPLDYGKEEVRSSPAALDFAKEEMNLQNNSVEDEERESQTPQTRHHEQNGQD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00645145;
- 90% Identity
- iTF_00645145;
- 80% Identity
- iTF_00645145;