Eonu028641.1
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- bab1
- Assembly
- GCA_018831715.1
- Location
- CM032063.1:45310115-45317661[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-08 0.00021 22.2 0.1 1 37 226 261 226 265 0.93 2 4 1.6e-11 4.1e-08 34.0 0.0 1 39 276 313 276 317 0.93 3 4 0.18 4.6e+02 1.9 0.0 19 39 348 368 336 373 0.76 4 4 2.9e-09 7.4e-06 26.8 0.3 5 40 395 430 394 432 0.92
Sequence Information
- Coding Sequence
- ATGGCTAAACCCCAAACGTACACTATGAAGTGGAATAATTACCAAAATCATATAGGAGGAATATTTTTGAAGCTATTGGAAACAGAAAGCATGGTTGATCTGACCCTATGCGCTGACGGAGAAAAAATCCATTGCCATAGAATCATACTTTCAGCTTGTAGCCCGTACTTCCAGGAGATTTTATCCGGTTTACCATCAAGCAATGCGGTTGTCATACTGTGTGGAATATCCGCCGAAGACGTGAAGTCTATCATAGAGTTCGTTTATAGAGGAGAACTGCACGTAAGTCCGGAACGATGTCCCTCAGTTCTTAAAGCAGCCGGAGCTCTGAAAATCTCTGGGTTGATGGAGgttAGCAATTTGTTGCCAGCTCTTCAAATTGATAATTCCAAAGACGAAGATACCATTCAGGAGGTGGATATAAGCGATATAAGCGACATTGAAACTATGAGAGCGGAGATAAAACAAGAGATGTTGAGTGCGGAGGACGGCACCATCGTCGATGAAGGAAGACTGAAGTTTCTAGACCCTAATTATCTTAATAGCAACACTGTTACCAACTTCCAAGTCATAGCAGAtGATAGTGAAGACCAATCTGACTTCAGCTTACTCATAGAAACTCCAGCggtagaaaataaaaagaagaaacgacGTGAATATTCTAAGAAAGATTACAGTGAGGAGGCAATATCAGCAGCTATCGAAGACCTGATGCAAGGACGCAGTCTGCTGGAGACTGCCAACACGTACAGCATCCCGCGGTCCACACTGTACGCCCGTGCACGCAGTTTTGGCATCTCCCCCACCATCTCGCGCCAGGACTACTCCGAGGAGAAACTCTCCGCTGCGGTGGAATCAGTCAAAGGTGGTGCAAGCCTGCAAGCAGCGTCGGTGATGTACGGGATCCCCAAGACAGTGTTGTGGCGCAGAGTGCAGAAGGATATCGGTTACTACGCCTTGAGTCGCAGGGCTAAGCTACGCCAGCGCTACCTGCCTCACGCCAAGGAAGCTGCTGTCCGCGCACTCGAGAACGGAGAGAAGTTCAATAAAGTAGCACTGCAATATAAGATTCCGAAGGCTACTCTGTTCCGAGAGAAGAGTCGACTGGTGGAGGCCGGCAAGTTGCCTCTGTCCTGCTTGAACAAGCGTGTGCCGAACAAGGACAACTTCAAGCAGCTGAGACTGAGACAAGCGGTGGCCGCTTGCAAGGAGGGACGGATGTCTCAAGCGGCAGCCTCCTCCACCTTCAAGGTGTCCAAGACGACGATCTGGCGCAGGCTGCAGCAGAGTGAGGCGGGGGGAGGGAAGCGGGTGAAGCTCCTCGAACCCAAGAGTGAACCGGAGGACGAGAACCTACTGGACTTCCAGGAGGTGGTGAGTGAGATCCCGGTGACTTACGGAGATGTGAGGGAGTATCCTTCGCTGATCATCTTGACCCCGAACAGCTGCGGGGAGTTGACCTACCAGACCGCAGAGGACTTGGTAGTCGACACTGTCTTAAATAAGTTGTCATCGTCTTGCTTCACACGGCCAGTAGACAACGTTACTGTACTAATAAGATGA
- Protein Sequence
- MAKPQTYTMKWNNYQNHIGGIFLKLLETESMVDLTLCADGEKIHCHRIILSACSPYFQEILSGLPSSNAVVILCGISAEDVKSIIEFVYRGELHVSPERCPSVLKAAGALKISGLMEVSNLLPALQIDNSKDEDTIQEVDISDISDIETMRAEIKQEMLSAEDGTIVDEGRLKFLDPNYLNSNTVTNFQVIADDSEDQSDFSLLIETPAVENKKKKRREYSKKDYSEEAISAAIEDLMQGRSLLETANTYSIPRSTLYARARSFGISPTISRQDYSEEKLSAAVESVKGGASLQAASVMYGIPKTVLWRRVQKDIGYYALSRRAKLRQRYLPHAKEAAVRALENGEKFNKVALQYKIPKATLFREKSRLVEAGKLPLSCLNKRVPNKDNFKQLRLRQAVAACKEGRMSQAAASSTFKVSKTTIWRRLQQSEAGGGKRVKLLEPKSEPEDENLLDFQEVVSEIPVTYGDVREYPSLIILTPNSCGELTYQTAEDLVVDTVLNKLSSSCFTRPVDNVTVLIR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00645156;
- 90% Identity
- iTF_00645156;
- 80% Identity
- iTF_00645156;