Basic Information

Gene Symbol
ct
Assembly
GCA_018831715.1
Location
CM032064.1:36747731-36760636[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.6e-27 5.3e-23 82.1 0.0 3 72 562 632 560 637 0.95
2 3 3.5e-31 5.1e-27 95.0 0.1 3 77 923 998 921 1000 0.96
3 3 4.3e-29 6.2e-25 88.2 0.1 3 75 1133 1206 1131 1210 0.95

Sequence Information

Coding Sequence
ATGGACAGGAGCAGAGGAGCTCCGCGCTCACGGCCGAGTGTGAGTGTAGCCTGGAGTGCTGAGTACGCTGCACCGCGCTCACGGCCGAGTGTGAGTGTAGCCTGGAGTGCTGAGTACGCTGCACCGCGCTCACGGCCGAGTGTGAGTGTAGCCTGGAGTGCTGAGTACGCTGCACCGCGCTCACGGCCGAGTGTGAGTGTAGCCTGGAGTGCTGAGTACGCTGCACCGCGCTCACGGCCGAGTGTGTGTAGCCTGGAAAATGATCAAATCCTTGAGTTCCCCCTCCTCCCGTCTCCCCGCCATGCCTCCGCTCCGCCGCTCTACCGCGAGTACAATGCCGCTCCTATCTCTTTATATAGCACTCCTCTCTCTTCATCTGTGGCACTGCTTCGAGTTCGTCTAATCAGAGTGAACTGTGAAGAGGTGCGAGTAGTGGGAAGTGGGAGGCAGGTGGACTATCAAAGCAAGGGTTTGACTGAGCAGTGTGCACTGAACGCTAAGGGTGCAAGTGATAGTGACATGACTCGGTGCGGGCTCGGGCTGTCCCCTCCTCACATGTCCCAGGTCTCAGCCCTCAGTTCTATCACCACCGACCAGTCAAGCTTAATCTGCGAAATTTCACAGTTGATAGAAGATGTGCAGAGACTGCAGTCGAGTATAGGTAAAATCCAAGAGAACTCCGCAACCCAGATCGCGCGACTGGAAGAGGAGCTGGAGCACAAAAGACAACACATTTCCAGGTTGGAAGCCAGGCTAGATTCCCAAAGAGACTACGAAGAATTGAAAAGGCAACTGAGTTTCCTAAAGTCGATTGAACTGCCCGCCAACAGTGAAGGGGATGTGAGAACGCTGGAAAGTCTTCTCCTGGAAAGGAGCAAGGCGCAGCAGCTGGATGCGATGAAGACTCCTTCCACAACCCCCACGGACATGCACGCACCTGCACCTCCTCAGGGACAGCCTCCCCTGCAGAACGTGGAAACCTTCGGTTCATTCCTCGGAGAGGAGATCGTTGCCAACTGGAGAAGGTCTCTGGAGAGGACAATCCTCAGCCAGGGCTCTGTTCCTCAACACCTCGGCCGACCTGGCATCCCGCCCCCAGAAGGCCGGTCTTCCAGCACGGGACCACTCCCGTCTCCTGTCAACGCCACCCCTCCACCTCCGCCTACACCGACCCAGAACCTCGATCTACCTGAGGATAATGGCAAGTCGAGGTTCGAGGAACGAGGAAGAGAGAGGGATAGTGTAGAACGAGAACACGAACCCGCAGTGACTTCCTCGTCCGGTAGCCATAGACCCTCGAGTAGTCCTGCCGTGTCGGGCGAGATCCAGCTCAACGGCAGTTCCACTCCTTGTAAGAGCCCGGCTGCCGAGTCCGACCTCGGGAACAACAACTCTCCTCAcctgaacaacaacaacaacaatatgcCCGCCAGTCTAGTCAACGGTTTCTGCGGGCTCAACGTCGGCCTCAACAACAACGTGCTGCACCCTTCGGCGCAACTCAACTTCAACGATGTCATGAAGAGTCCGTTCAGATTTGACGATCGGTCGCCGTTCAGATTCGGAAACGAAGACCCCGGCGCGATCGTAGGGAGGTTCGGTGAATCACTGATCCCGAAGGGTGACCCGATGGAAGCGCGCCTGCAAGAAATGCTGCGGTACAACATGGACAAGTACTCCGCCCAGAACCTGGACACACTGAACATCGCGAGGAAGGTGCGAGAGCTGCTGTCGATCCATAACGTCGGTCAGAGGCTGTTCGCCAAGTACGTGTTGGGGTTGTCTCAAGGCACAGTCTCCGAGCTGCTCTCCAAGCCCAAGCCCTGGGACAAGCTGACAGAGAAGGGACGCGACAGTTACCGCAAGATGCACGCTTGGGCGTGTGACGACAACGCCATCCTGCTCCTCAAGTCCCTCATACCCAAGAAAGGTGTAGGAGCTGGCAAAGACACAGGGATCCCGGCGATGTTTGGTGGGCGGGAGACAGGAGACATGACCGAGGAGAGGATAGCCCACATTCTCAGTGAAGCCAGCCACCTGATGAAGACAGAAGACAGTCGCAGCAATGATGACAGTAGATCTCCTACGCAACCCCAGCAATGTATGTCACCTCTGAGCAAAGGAGACAATTCGATGAACCGCAAGCTGAAAAAGTATGAAAATGACGACATCCCCCAAGAGCAGGTGGTCAGAATATACCAGGAAGAGTTAGCAAAGCTGATGGGTCGCAGGTTTGAAGATACCATGAGAGGAGACCAACCTTATCCAGGGTTGCTGTTTCCTCACTTCTTCGGCGGTGGAGGCAGCGGTCCAGGGTCTGCGGAGGAGATCCGCATGGCACTAGAcgcttaccaccgagaactagcCAAGCTGAACTCACAGTGCGGAGGAGTGAACATGCCCGCCGGTCTACTCGCTCTACAGCAGCAGCAACAGCAAGCAGTGTTCTCCCAGCAACAGCAACTGGGCGGCCCCACGCACAACGGTATGGCTCAAGACCTTTCCTTACCCAAGGAGCATCAACGCAAGGACGCCAAACTGCCGAATGGAATGCCAGCCATATCCACAGCCAGTTCTCCTCTGGGGAATTCAATCCTTCCTCCTGAAGACTTCTCTCCGAGTGCAGCTGTCAGCCCCTTACAAAGGATGGCCTCCATCACCAATGCCCTCATCTCCCAGCCATCTGCTCCGCACCACCACTCCCCCTCTCAGCGACCTCTCAAGGCAGTCTTGCCACCGATCACACAACAGCAGTTTGACCAGTTCAACAACCTCAACACTGAAGAAATTGTGAGAAAGGTAAAGGAACAACTGAGTCAGTTCTCGATAAGTCAGCGACTCTTCGGTGAATCTGTGTTGGGGCTCTCTCAAGGCAGTGTGTCTGATCTGCTGGCCCGACCCAAACCCTGGCATATGCTCACCCAGAAGGGCAGAGAACCGTTCATTCGCATGAAGATGTTCCTAGAGGACGACAATGCTGTCCACAAACTCGTAGCTTCTCAGTACAAAATAGCTCCAGAAAAACTCATGCGTACTGGAGGATATGGAATCAGTTCTCCTGGATCATCAATTTCAAAACCACTGCCGCCTAGCTCAGGAAAGATGCCTCCAATGCCTCCTTCCATGGATATGAAACCTGGTGAAATGAGTCTCAACCATCTGAACTACCTGCATCCTCCACAGCAAGTGCCGCCTCCACCTCCACCACCTCACCACCACATCCCTCCACCCCACCATCTGCAGCTGAACAGTCTTGAGCAGCTAAAGAAGAACCACACGTCGTCTGCAAACCTCCAGCCTCAGTGCAACACCATGCCTCCACTCCAGGTCAACTCTGCCATGCGCAGTCTGGGCCAGCAAGTCGCACCTTCCGTGTACGAGATGGCTGCACTCACACAAGACCTCGATACACAGACCATCACAACCAAGATCAAGGAGGCGTCACTGGCCAACAACATCGGCCAAAAGATTTTTGGTGAAGCTGTTCTGGGGCTATCACAGGGATCAGTGAGTGAATTGCTTTCCAAACCCAAACCATGGCATATGCTGAGCATAAAAGGGAGAGAACCTTTTATCCGTATGCAACTGTGGCTCTCAGATGCACAAAACATCGACAGACTGCAAGCTATCAAGTCGGAGAGACGAGAGCTGAACAAGAGACGAAGAGGATCCGGGCAACAAGACAACAGTAGTGATACATCGTCAAACGACACTGCCGAGTTCTACCATAGCAGTGCAAACAGCCCTCCTTCAGCAGCTAAGAAACAGAGGGTCCTTTTCTCCGAAGAGCAGAAAGAAGCTCTGAGGTTGGCATTTGCTCTCGATCCTTACCCTAGTGTTAGTACCATTGAGTTCCTCGCAAACGAACTGACTCTTGCTTCTCGAACAATTACAAACTGGTTCCACAACCACAGAATGAGGCTAAAGCAGCAGTCACCCCACGGAAGTGATTCTGGCCAAGGTAATAGAGAAAACCAAGGTCCAGGATTCGATCCCAACCAGTTCAGAATGCTCCTCAGTCAACGTTTAGGACTGAGTGCTCTTCCGATCCCTTTTCCTACTCCTTACTTTCCTCCGAACCCAGAACTGGCGGCTCTCATGCAGAGAGGAATCTTGCCCATGAGAGAACAAGACTCCGGACTCGACTTGACACTGAAGAGAGAAACCGGCTCGGACTACGAAGACAACGAAAGTAGATTAGATTCTGAAGACTCTGATATCGGTGTTCCGGAACTTCCACAAGCACCTTCAGGATCGAGTAGGCGGAAGCCTGCGGCACCTCAGTGGGTGAACCCTGACTGGCAAGAAGAGTCAGAGGTGATAATCAACGGAGTGTGTGTGATGCAGACGGACGATTACAAAATGGAGCGTGAGGGGGAAACTGTGAGAGTGGAACCCACACCTGTAGCTGAGGAAGAGGAAGGCAGAACGGCGAGTTTAGCGTCTCCTGCACCCCTGCCTCTAGATGTCCATTTGAAGAAAGAACCTCCCACCGACGGAAGCCAAAAGGTCGAGGACGAGAAATCCTTACAGACTGTAAAAGAAGAAAAGTGGGATAGtgagttttaa
Protein Sequence
MDRSRGAPRSRPSVSVAWSAEYAAPRSRPSVSVAWSAEYAAPRSRPSVSVAWSAEYAAPRSRPSVSVAWSAEYAAPRSRPSVCSLENDQILEFPLLPSPRHASAPPLYREYNAAPISLYSTPLSSSVALLRVRLIRVNCEEVRVVGSGRQVDYQSKGLTEQCALNAKGASDSDMTRCGLGLSPPHMSQVSALSSITTDQSSLICEISQLIEDVQRLQSSIGKIQENSATQIARLEEELEHKRQHISRLEARLDSQRDYEELKRQLSFLKSIELPANSEGDVRTLESLLLERSKAQQLDAMKTPSTTPTDMHAPAPPQGQPPLQNVETFGSFLGEEIVANWRRSLERTILSQGSVPQHLGRPGIPPPEGRSSSTGPLPSPVNATPPPPPTPTQNLDLPEDNGKSRFEERGRERDSVEREHEPAVTSSSGSHRPSSSPAVSGEIQLNGSSTPCKSPAAESDLGNNNSPHLNNNNNNMPASLVNGFCGLNVGLNNNVLHPSAQLNFNDVMKSPFRFDDRSPFRFGNEDPGAIVGRFGESLIPKGDPMEARLQEMLRYNMDKYSAQNLDTLNIARKVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAILLLKSLIPKKGVGAGKDTGIPAMFGGRETGDMTEERIAHILSEASHLMKTEDSRSNDDSRSPTQPQQCMSPLSKGDNSMNRKLKKYENDDIPQEQVVRIYQEELAKLMGRRFEDTMRGDQPYPGLLFPHFFGGGGSGPGSAEEIRMALDAYHRELAKLNSQCGGVNMPAGLLALQQQQQQAVFSQQQQLGGPTHNGMAQDLSLPKEHQRKDAKLPNGMPAISTASSPLGNSILPPEDFSPSAAVSPLQRMASITNALISQPSAPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGISSPGSSISKPLPPSSGKMPPMPPSMDMKPGEMSLNHLNYLHPPQQVPPPPPPPHHHIPPPHHLQLNSLEQLKKNHTSSANLQPQCNTMPPLQVNSAMRSLGQQVAPSVYEMAALTQDLDTQTITTKIKEASLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAQNIDRLQAIKSERRELNKRRRGSGQQDNSSDTSSNDTAEFYHSSANSPPSAAKKQRVLFSEEQKEALRLAFALDPYPSVSTIEFLANELTLASRTITNWFHNHRMRLKQQSPHGSDSGQGNRENQGPGFDPNQFRMLLSQRLGLSALPIPFPTPYFPPNPELAALMQRGILPMREQDSGLDLTLKRETGSDYEDNESRLDSEDSDIGVPELPQAPSGSSRRKPAAPQWVNPDWQEESEVIINGVCVMQTDDYKMEREGETVRVEPTPVAEEEEGRTASLASPAPLPLDVHLKKEPPTDGSQKVEDEKSLQTVKEEKWDSEF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00808152;
90% Identity
iTF_00644925;
80% Identity
iTF_00644925;