Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018831715.1
Location
CM032064.1:32911680-32934099[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-26 3.1e-22 80.0 0.0 2 89 47 130 46 130 0.95

Sequence Information

Coding Sequence
ATGACTCCGGAAAAAAATGGAATCTGCAAAATACGTCCTCCCCCTACATGGCAGCCTCCCTTTGCAGTTGATGTGGaccgttttaaatttgtaccCAGAGTTCAGAGATTAAATGAGTTGGAGGCTTCAACAAGAATTAAACTGAACTTTCTGGATCAAATAGCAAAGTTCTGGGAACTTCAAGGTTCGTCTCTGAAAATACCAATGGTTGAAAGACGAGCATTAGATCTCTTTACTCTCCACAGACATGTTCAGGATGAAGgTGGATTAGATATAGTTACCAAGGAAAGAAAGTGGTCGAAAATTGCCAGTAAGCTGGGCCTCCCTCCTGGAAAAAACCTCGGCACACTTTTGAGGAATCACTATGAGAGAATATTATATCCCTTCGATGTCTTCCAGGAAGGGAAAACTGTCGATGACATGAAAATGGAAACAGACCAGGATCAGCTTGATAACACTGACTACAAACCTCATGGAATAATTTCACGACAGGCCATCAAGCCTTCCGGCCAGGGACAAAATGATCGGCGAACCAAGCGCCATTGTGCTGCAGGAAAGTTTACAGGGGCCAAGATGGCAGGCTACCAACCCAAAGAAAATAAGCCAGCAAAGGGTAAAAAAATGAAGGAGATCACATTAGACGAAGACCCGTTTGGCACGCTTTGTCACAAATGCGCCCGGAGGGATGCAGAGGCGTTCATGTTGCTTTGTGACGGATGTGATGATAGTTACCACACTTTTTGTCTGTTGCCACCGCTTCTAGAAATACCCaaaggtgACTGGAGGTGCCCTAGATGTGTTAAGGAGGAAGTCAGCAAACCAAGTGAAGCTTTTGGCTTCGAACAAGCGAAACGAGAGTATACCCTTCAACAGTTTGGTGAAATGGCAGACCAATTCAAATCTGAGTATTTCAATATGCCTGTTCATAAAGTTCCTACAACACTTGTTGAAAAAGAGTTTTGGAGGATTGTTCAATCAATTGAAGAGGATGTAACAGTAGAATACGGGGCTGATCTGCACACTATGGACCATGGCTCAGGTTTCCCAACCAAGCAGACACTAGAAAACAGCACACCAAGTGATATCAACACATATGCTGAATCAAGCTGGAATCTAAACAACCTACCAGTTTTGGAAGGATCAGTATTGGGCCACATCAATGCTGATATTTCCGGCATGAAAGTGCCCTGGATGTACGTAGGGATGTGCTTTGCCACATTCTGCTGGCACAACGAGGATCATTGGAGCTACTCAATCAACTATTTACACTGGGGAGAACCAAAGACATGGTATGGTGTACCTGGATTTAAGGCAGAGATGTTTGAGGAAACCATGAAAGCCGCAGCACCAGAACTATTCCAGTCCCAGCCAGACCTGCTGCATCAGCTCGTTACCATCATGAACCCCAACTATCTCATGGAAAAAGGGGTTCCGGTATTTCGAACGGATCAGCACGCTGGAGAGTTTGTCATCACATTTCCTCGAGCATACCATGCAGGTTTCAACCAAGGGTACAACTTTGCAGAAGCAGTCAACTTTGCTCCGGCAGATTGGCTAATGATGGGCCGAGAATGCGTGAATCACTATTCAACACTACACAGATATTGTGTTTTCTCTCACGATGAACTCGTTTGCAAGATGGCAGTGAAGCCAGACAACTTAGATCTGAGAATCGCAGCATCTACTTACTACGACATGTTAACTATGGTCGACCTAGAGAAGAAACTTAGAAAAAACTTGCTTGAAGCTGGTGTTGTGAAGGCAGAGAGAGAAGCGTTTGAACTGTTACCTGATGATGAGAGGCAATGTGAATTCTGCAAGACAACCTGTTTCCTGTCAGCAGTCACTTGCTCGTGTAACCCGAAGATCCTGGTGTGTCCCAAGCACTTGGACCAGTTGTGTAGCTGTCAGACAAACAAGAACAAAGTCATGCGGTATCGTTACACTTTGGATGAATTGCCAATCATGATCCAGAAACTGAAACTAAAAGCAGAATCGTTTGATGTATGGGCTGATAGGGTCAGACAAGCATTGGATGCAGCTCATCCTCACGTTTTCACGTTTGCTGAGCTGAGGGAACTGTTGGAGGAGGCAGAGCTGAAGAGATTCCCGAACTCTGATCTTCTCCAAGGACTTGGTCTAGCAATCTTGGAAGCGGAGAAGTGTGCAGGGATAGCTCGACAGTTGGATAGCAATAGAATGCGAACAAGgaaaacaCAAGAAGTCAAATGCAAGCTGACAGTTGAAGAAGTGACCATGTTCTATGAACAGATACAGGAGTTAGCCTGCAGGATCAAAGAAGAGGACGTAATCGAAGCTCTACTTAAAAATGCGAAAAAGTTTCAAGATGAAGCGAAAGAACTTTTAGAGCAAGAAATAGTTAAATCTGAAAAACTAAAAACGTATCGGCGATACCGATACTTGATATGCCTCGATATCGCTTGGTACGCAGGTATCGATGATACCGATACCTTGATATGCCTCGAGTATCGCTATATCGGAGGTATGATGATACTCGATACTGATACCTCGATAGGTCACGGTATCGGTGTACGATGA
Protein Sequence
MTPEKNGICKIRPPPTWQPPFAVDVDRFKFVPRVQRLNELEASTRIKLNFLDQIAKFWELQGSSLKIPMVERRALDLFTLHRHVQDEGGLDIVTKERKWSKIASKLGLPPGKNLGTLLRNHYERILYPFDVFQEGKTVDDMKMETDQDQLDNTDYKPHGIISRQAIKPSGQGQNDRRTKRHCAAGKFTGAKMAGYQPKENKPAKGKKMKEITLDEDPFGTLCHKCARRDAEAFMLLCDGCDDSYHTFCLLPPLLEIPKGDWRCPRCVKEEVSKPSEAFGFEQAKREYTLQQFGEMADQFKSEYFNMPVHKVPTTLVEKEFWRIVQSIEEDVTVEYGADLHTMDHGSGFPTKQTLENSTPSDINTYAESSWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGFKAEMFEETMKAAAPELFQSQPDLLHQLVTIMNPNYLMEKGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLMMGRECVNHYSTLHRYCVFSHDELVCKMAVKPDNLDLRIAASTYYDMLTMVDLEKKLRKNLLEAGVVKAEREAFELLPDDERQCEFCKTTCFLSAVTCSCNPKILVCPKHLDQLCSCQTNKNKVMRYRYTLDELPIMIQKLKLKAESFDVWADRVRQALDAAHPHVFTFAELRELLEEAELKRFPNSDLLQGLGLAILEAEKCAGIARQLDSNRMRTRKTQEVKCKLTVEEVTMFYEQIQELACRIKEEDVIEALLKNAKKFQDEAKELLEQEIVKSEKLKTYRRYRYLICLDIAWYAGIDDTDTLICLEYRYIGGMMILDTDTSIGHGIGVR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-