Este009012.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- -
- Assembly
- GCA_949752835.1
- Location
- OX457085.1:81833758-81842384[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 7.7 7.8e+02 1.7 0.1 3 11 107 115 105 127 0.82 2 17 8 8.1e+02 1.6 5.3 1 23 338 361 338 362 0.94 3 17 0.0031 0.31 12.3 1.2 2 23 513 534 512 534 0.97 4 17 0.00078 0.079 14.2 0.8 2 23 773 794 772 794 0.97 5 17 2.7 2.7e+02 3.1 4.1 2 23 849 872 848 872 0.76 6 17 0.0054 0.55 11.6 3.2 1 21 878 898 878 900 0.96 7 17 1.1 1.1e+02 4.4 0.8 1 23 964 987 964 987 0.83 8 17 0.0014 0.14 13.4 1.2 1 23 1030 1052 1030 1052 0.98 9 17 0.015 1.5 10.2 0.9 2 23 1062 1085 1061 1085 0.93 10 17 0.033 3.3 9.1 2.1 1 23 1092 1114 1092 1114 0.98 11 17 0.0037 0.37 12.1 0.9 1 23 1119 1141 1119 1141 0.98 12 17 0.0058 0.58 11.5 3.5 1 23 1148 1171 1148 1171 0.98 13 17 0.0041 0.41 12.0 0.6 1 23 1262 1284 1262 1284 0.98 14 17 0.00057 0.057 14.7 2.5 1 23 1289 1311 1289 1311 0.98 15 17 0.0046 0.46 11.8 4.6 1 23 1320 1342 1320 1342 0.98 16 17 4.9e-05 0.005 18.0 2.6 1 23 1348 1370 1348 1370 0.98 17 17 0.036 3.6 9.0 4.4 1 23 1376 1398 1376 1399 0.96
Sequence Information
- Coding Sequence
- atgTCGTCGTCATCCTTAGAGTACTCTAAGTCTAAGTCGTCATCAGgaccattaaaaattttatcaacaaATGTTAATAATCAATTGGatgataaaaatgatcaaaatttgGAAGATTTAAGCTTAATTGCTGGTAAAATAGTTACAAATGCTTTACACATACCAAGAAGTCTTTTTTGTCCATTTTGTGCTGATGaatatatgttTGAATTTACTCTTAAGGATCATTTAAAACGTAAACATACCAAAGAATTAGCAAAACGTAATGAAAATGATTTACCTGAAAGTGATCAAACATTAAATGATGATAATCATTTATGTCCATATTGTAATGcggttttttatatatatggttTAATACCAAAACATGTTGCTAATCATCATGGTAGAAATTGGTTACAACATTGGCAACAAACATATggacaaaaattatgtaaaaaattaacaaaattatcatCACCCGAAACAACAAAAGATCCTAGTATTATATATGCTGTATGTTCACCTGGTTTAAgtgatatttttgataaattaattactaAAGATTCTGATTCAATTTTAACTGATTCACCACAATTAAAATCAATACTTAAAAAaacaccaaataaaaaaatactacaaTATGAAACAATAAATCGTATTACTATAAATTCACCATCTGGTATATCTATAAGACGTAATAAAAGTGAAATAATAAAACGTTCAATATCTGTACGTCGTGAATTACGATTTGATTTACCACCATTAAAGATTACACCTAATAATTCACCAATTATACGAAAACATCGTAAGTTATATGATTTATGGCGATTATGTAGAATTCGTAAAAATCGAAAATCATCTAATAATACTATTAATGATTCACTAAATTCAACAAGTAaagactttttaaaaaaatgtaaaaaaaatcaaaatggtagaaatttattacaacaaaatattattactagtacaccaattaatttattagatgaaactgataatcgtccattattattttcatcgGAACGTTATCAATGTGCTTGTTGTAATACATGTTATCAAAGTAATCCagatttattaattcatttaaaagaGAAACATCATAGtgctaaatatttattaagacCACATTATAAATGCGaaaataccgaagaaattaaaattgaagtaaATTTTGAAGATAAAAATCAGATTAAAGCAGAAAATATCAATGATACAATTCAAATAAATGATACAAATCAAatcaatcaaataaaaaatgaaattaatgatatCGTTAATAATCATAACAACGATGTTGATAATAcaacaaatcaaataaaaaatgaaattaatgatataaatCAAATCAAAGAAATCGATAATGATGATGACAACGAAGATGATGATACTGATGATGAAAATTGTACATTTCAAGATATTTTAGAAGCAGctagaaaatttttatcatttaatttaaatccaaaaataattgataataatataataaataatgataatcaCAAAATAAGTGTACGTAAAGAATATTCTGAAGGTATTAATCGTGAATCATTAACatgtaattattgtaataaagtCTATTCATGTTTACCAATGTTACGTGAACATATTCGTGTACATAAAGGTGATCGTATAATATTATGTGATATATGTAATAATGGTTTTTTACGTACTGGTTATTTAGatgaacataaaaaattatttcattcatcagataaagaagaaataattaaaataaaagataatttattaaataatattaatataacaaatgaattattaaataatggtataataacaacaacaacatcatcatcaacaacaacagcagcaccACCACCAACAACAGCGATAGAACCAATGCAACCATTTGAATCATGTGATTTAGATGATTTAGAAGAAATGCTTAGTTGTCATATTGTTAAAAAACCAGATATTGAaattaatcaatataaaaaaaggaaatctaTTATACAAGCACATATTATATCACCACCATTAATACCAACATCTGTAATAAATCGtaataatattataccaaataataatattataacacaacaacaatatcaacaacaacaacaacatcaacaacaaccacaaattattagaaaaacaaCAAATTCCATTCCATTAATGCAAACAGTAACACCAACAATACCAACACCAACAAATTTCCAAgaaacaacaaatttattacaatcatcatcattatcaccaACAATTATTCAAACATCAACAACAATACCattaatattatcatcatcaaatggacaaataaattcaattaataatattaataatcatattattaatgataattatataaatttacaatgcCAATAttgtgataaatattttacaaaaattaatgcCTTAGATAATCATACACGTATTCATATGAATGATAGAccatataaatgtaattattgtCGTGCTGATTTTTGTTTAGaacaatcaaaaaattatcatgaaaaattacatattgatgCATTAGATCGTCATATTGATTtacataaaaagaaattaaatacaaataatttagataatatatatcaaatatcatgtacaatatgtacaaaaaaatttcaacaagaAAGTTCAAGatcatataaaaaacatatgatATCACATGGTATAATTGAaacatataaatgtaaattatgtttaaaagaatttataaaagatgaaaatttaatacGACATATGAAATGTCATATTAATGATACAAATTCaattaatgaagaaaataatcAATTACAAGAAAATCAACAACAGGAAAAACAGCAACAagaaaatcaacaacaaaaacaacaagaaaatcaacaacaacaacaacaagaaaatcaaccacaacaactacaacaacaacaaaataaacaaCAGGAACAATCACaacaacaaatatataaatgtaattattgtccatcaatatttacattattattaacaaaaaatttacatgaacgtattaaacataataataataaagataataataaattaataaaatcaacatCAAatgatcaacaacaacaaaatttttataataataataataaaacaaataatatgaaaaatacaaCAAAACAACAACCATCAACATATAAATGTCaacaatgtaataaaatatttacatcattattaatattaaaatcacaTTTACGTATACATgtaccaataaataataataaattattatcatgtACAAATGATAAatgtgaattattatttaataataaaaatgaattaagaaTACATCAACGTCAACATATTGATCCATTAAAACcatttaaatgtaatatatgttataaagattttaataaattaataatattaaaattacatcaaAAGCGTCATAATAAtgcaaaatataaatgtaatatatgtttaataaCATTTAAAGAACGTTTATTATTAcaagaacataaaaaaattcataaaaatagtGATAAACGATATAAATGTGAATTATGTCAACAACATTTAATATCAGAAAAACatttagaaaaacatattaaaattaaacattataataataataatgataaatataataataaaaaaattattaataataatgatattgataataaaaataatatagaaattatatcaATTCCAATGTTATcaccaattaataataatagtaatgatattattaataatagtgatttaataattgaaaatcaaataattgaaCAATCAAATATTGATGATATATTAGATAtaaatgaagaagaagaagaacaacaacaacaacaaaatcatcatcatcaacaacaacaacatccaaatcaatttaaatgtgatgattgtttaaaattatttccaaatgaaattaaattacgtATTCATAAAAGATTACATACAATAAATCcatttaaatgtaatatatgtagaATGCATTTTAAAACTGAAGAACGTTTAATTAAACATCAAATTGTACATAATGATGAAACTGTTGGTAAAGCATTTTCATGTAATATATGTTCACGggtatttaaaacaaaattaaaattaaattgtcataTTAAAACACATTCAAATGATAGACCATTTTCATGTCCAAATTGTCCATTAACATTTAAAACAAAAGGACATTTTAATGAACATTCTAGAATGCATACTGGTGATAAACCATTTAAATGTACATTTTGTGATATGGAATTTGCTAGATCAAATTATCGTTTACAACATGAAAGAAAACATCATAAtcggaaataa
- Protein Sequence
- MSSSSLEYSKSKSSSGPLKILSTNVNNQLDDKNDQNLEDLSLIAGKIVTNALHIPRSLFCPFCADEYMFEFTLKDHLKRKHTKELAKRNENDLPESDQTLNDDNHLCPYCNAVFYIYGLIPKHVANHHGRNWLQHWQQTYGQKLCKKLTKLSSPETTKDPSIIYAVCSPGLSDIFDKLITKDSDSILTDSPQLKSILKKTPNKKILQYETINRITINSPSGISIRRNKSEIIKRSISVRRELRFDLPPLKITPNNSPIIRKHRKLYDLWRLCRIRKNRKSSNNTINDSLNSTSKDFLKKCKKNQNGRNLLQQNIITSTPINLLDETDNRPLLFSSERYQCACCNTCYQSNPDLLIHLKEKHHSAKYLLRPHYKCENTEEIKIEVNFEDKNQIKAENINDTIQINDTNQINQIKNEINDIVNNHNNDVDNTTNQIKNEINDINQIKEIDNDDDNEDDDTDDENCTFQDILEAARKFLSFNLNPKIIDNNIINNDNHKISVRKEYSEGINRESLTCNYCNKVYSCLPMLREHIRVHKGDRIILCDICNNGFLRTGYLDEHKKLFHSSDKEEIIKIKDNLLNNINITNELLNNGIITTTTSSSTTTAAPPPTTAIEPMQPFESCDLDDLEEMLSCHIVKKPDIEINQYKKRKSIIQAHIISPPLIPTSVINRNNIIPNNNIITQQQYQQQQQHQQQPQIIRKTTNSIPLMQTVTPTIPTPTNFQETTNLLQSSSLSPTIIQTSTTIPLILSSSNGQINSINNINNHIINDNYINLQCQYCDKYFTKINALDNHTRIHMNDRPYKCNYCRADFCLEQSKNYHEKLHIDALDRHIDLHKKKLNTNNLDNIYQISCTICTKKFQQESSRSYKKHMISHGIIETYKCKLCLKEFIKDENLIRHMKCHINDTNSINEENNQLQENQQQEKQQQENQQQKQQENQQQQQQENQPQQLQQQQNKQQEQSQQQIYKCNYCPSIFTLLLTKNLHERIKHNNNKDNNKLIKSTSNDQQQQNFYNNNNKTNNMKNTTKQQPSTYKCQQCNKIFTSLLILKSHLRIHVPINNNKLLSCTNDKCELLFNNKNELRIHQRQHIDPLKPFKCNICYKDFNKLIILKLHQKRHNNAKYKCNICLITFKERLLLQEHKKIHKNSDKRYKCELCQQHLISEKHLEKHIKIKHYNNNNDKYNNKKIINNNDIDNKNNIEIISIPMLSPINNNSNDIINNSDLIIENQIIEQSNIDDILDINEEEEEQQQQQNHHHQQQQHPNQFKCDDCLKLFPNEIKLRIHKRLHTINPFKCNICRMHFKTEERLIKHQIVHNDETVGKAFSCNICSRVFKTKLKLNCHIKTHSNDRPFSCPNCPLTFKTKGHFNEHSRMHTGDKPFKCTFCDMEFARSNYRLQHERKHHNRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -