Basic Information

Insect: Empis stercorea
Gene Symbol: -
Assembly: GCA_949752835.1
Location: OX457088.1:59374648-59376906[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 8.7 8.7e+02 1.5 0.0 3 9 175 181 174 187 0.82

2 12 0.32 32 6.0 1.7 2 23 200 220 199 220 0.93

3 12 0.14 14 7.2 0.5 2 21 234 254 233 255 0.77

4 12 1.4 1.5e+02 4.0 0.1 2 23 447 467 446 467 0.85

5 12 0.0066 0.67 11.3 1.4 1 23 478 500 478 500 0.97

6 12 0.36 36 5.9 1.9 3 23 509 529 508 529 0.97

7 12 1.8e-05 0.0018 19.4 2.4 1 23 536 558 536 558 0.99

8 12 1.3e-05 0.0013 19.8 0.9 2 23 565 586 564 586 0.96

9 12 6.3e-06 0.00064 20.8 0.6 1 23 592 614 592 614 0.99

10 12 9.3e-06 0.00094 20.3 0.3 1 23 622 644 622 644 0.98

11 12 4.3e-05 0.0044 18.2 0.9 1 23 650 672 650 672 0.99

12 12 0.0067 0.68 11.3 1.1 2 23 679 701 678 701 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	8.7	8.7e+02	1.5	0.0	3	9	175	181	174	187	0.82
2	12	0.32	32	6.0	1.7	2	23	200	220	199	220	0.93
3	12	0.14	14	7.2	0.5	2	21	234	254	233	255	0.77
4	12	1.4	1.5e+02	4.0	0.1	2	23	447	467	446	467	0.85
5	12	0.0066	0.67	11.3	1.4	1	23	478	500	478	500	0.97
6	12	0.36	36	5.9	1.9	3	23	509	529	508	529	0.97
7	12	1.8e-05	0.0018	19.4	2.4	1	23	536	558	536	558	0.99
8	12	1.3e-05	0.0013	19.8	0.9	2	23	565	586	564	586	0.96
9	12	6.3e-06	0.00064	20.8	0.6	1	23	592	614	592	614	0.99
10	12	9.3e-06	0.00094	20.3	0.3	1	23	622	644	622	644	0.98
11	12	4.3e-05	0.0044	18.2	0.9	1	23	650	672	650	672	0.99
12	12	0.0067	0.68	11.3	1.1	2	23	679	701	678	701	0.95

Sequence Information

Coding Sequence: ATGAATTATGAGAAAAATGATTTCGATAATGAATTAATAATCGATGATCAAATATATGAAATGACTGAAGAacataattcaacaaataaagtaaaagatttaaaaattgaaatactttTTGATGATGAAGAAAATCTTGAAAGTTATATATCACCACCAAATCCGGTAAATGATGATTGGAAATTTGATCCATCTAATACAATTTCTCTTCaagtaagaaaaataaataaatataaaaattgtggtACAATAAAATCACGTAATCGACGTAAATTATGTACAAAATGTAATCGTGTTACAAATGATATATATCGACATCGGAAAATATGTTCAGTAAATCGTGTATGGGTTACATGTATATATTGTGGTAGTCATATGTTCAAAGAACGTCTTGAAAATCATATGGatgaaaaacataaacaaaatttagaaaatgataaaattatgaaaagtaTTACTTACGAAtctgataatgatgataatatttctaaagaaaatttaaataataataagaaaaaaccATGTGAATATTGTGGTAGATTTGTAATAAATCTTTTACAACATGAACTAATTTGTTCCCAATCAAAAACACGTGTTACATGTAAAATATGTGGTAAACACATATTTCAAAGAAATATATCTAAACATATggatttacataataatttattacaaaaaaaaattaataaacataatGATAAATGTCGTTATTGCAATCGTAATTTTAATACACGTTGGGGTTCATTAGAACGTCATGAAAGATATTGTTCAAATTTAATGAATcgtgaaaaatgtaaatattgtaaatattctatatcaaaaataaatatgccaaaacatttattaaataaacatatGGATAAAGatggtaatttaaaaaatatattaataacaaattatgaAACTTATGcagaaaatgattataaaaaattaccatGTCGTTATTGTaatgaattatatttacaaCCAGTTTTACATGAAAAACATTGTTCAGCACGTACTGGTAATGAAAAACAATGGACACGTTGTCAAATATGTTCAACATTAGTACAAAGTTTACGCTTAAGTatacatatgaaaaaaattcataaaattataacagATGATAAAGGTAATGATATTGAAAATGAAGTAAATtcaaatgataatattaaagctgaatttgttaaatgtatattatgtGGTAGTCAtatattattaaagaatttcCAATATCATATATTTCGTATACATAAAGATCGTTTACCAATAACTGATAATGAAATGttagattataataaattatcaacaaTAGATTTAACAGAATTTCGTACAACAACAATATTTCCAGAGTggataaaatgtaaaaaatgcgGTTTAATGGTAGCGGAGCCAACATTAGAATCACATTTGCAAATCCATAAAAAATTTGGCAATTTACGTGGTACAAAGtttaaatgtaatatttgtaataaaaaatatccagCTAGACGATATGAACAACATATTCGTACATCACATTTAGATGAAAATAATTCAGTATTTTGTAATGAATGTGATTTTAAACGTATACATAATGATTATTATGATGATCATATGAAATGGCATCGTGGTGAAATATTAGGTTATCAATGTAAAATGTGTAATCGTCgttatgaattaaaatataatttagatcgtCATATGAAAATTCATGAAGAAAAACAATCATGCGATTGTCCAGAATGTGGTAAAacatttccaaataaattacgTTTAAATCAACATATTCAAATACATTCCACAGATGCTAAATATCAATGTGATACTTGTGGTAAAGCATTCATTATAAAATCAAGATTACAATCACATCAATTAACACATATGGATAAGAAATTTTATCGTTTTCCATGTACATTATGTAATAAACGTTTTAGTGGTAAAGCAAAATTAGCTGATCATATGATAACACATACAagaactaaaaattttaaatgtgatGTATGTGATGCAAAATTTGCTAGAAAATTTGATGCTATTAAACATCAAAGACGTCATACTGAAATTGGTCATTTAATGTGTTCAATATGTGAAAAAAGATTCTTTTTAAAACGTCCATTAAAAGATCATTTAAAATCACAACATGGTATTTTAGATGAAAAGTCTATTATAGATACTAGAGTACAACAAGGATATAAAGATGATACAACCTTTTATGTAAATGAAATGGAAAGTGAAGAATTACCTAAAATTATTTCAGAAGTAGGAGATTATGAAATTGTTATGGAATTTGATGTATAG
Protein Sequence: MNYEKNDFDNELIIDDQIYEMTEEHNSTNKVKDLKIEILFDDEENLESYISPPNPVNDDWKFDPSNTISLQVRKINKYKNCGTIKSRNRRKLCTKCNRVTNDIYRHRKICSVNRVWVTCIYCGSHMFKERLENHMDEKHKQNLENDKIMKSITYESDNDDNISKENLNNNKKKPCEYCGRFVINLLQHELICSQSKTRVTCKICGKHIFQRNISKHMDLHNNLLQKKINKHNDKCRYCNRNFNTRWGSLERHERYCSNLMNREKCKYCKYSISKINMPKHLLNKHMDKDGNLKNILITNYETYAENDYKKLPCRYCNELYLQPVLHEKHCSARTGNEKQWTRCQICSTLVQSLRLSIHMKKIHKIITDDKGNDIENEVNSNDNIKAEFVKCILCGSHILLKNFQYHIFRIHKDRLPITDNEMLDYNKLSTIDLTEFRTTTIFPEWIKCKKCGLMVAEPTLESHLQIHKKFGNLRGTKFKCNICNKKYPARRYEQHIRTSHLDENNSVFCNECDFKRIHNDYYDDHMKWHRGEILGYQCKMCNRRYELKYNLDRHMKIHEEKQSCDCPECGKTFPNKLRLNQHIQIHSTDAKYQCDTCGKAFIIKSRLQSHQLTHMDKKFYRFPCTLCNKRFSGKAKLADHMITHTRTKNFKCDVCDAKFARKFDAIKHQRRHTEIGHLMCSICEKRFFLKRPLKDHLKSQHGILDEKSIIDTRVQQGYKDDTTFYVNEMESEELPKIISEVGDYEIVMEFDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -