Este008973.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- zfy1
- Assembly
- GCA_949752835.1
- Location
- OX457085.1:81374880-81376373[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.2 1.2e+02 4.2 3.9 1 23 42 67 42 67 0.94 2 11 0.00015 0.016 16.5 1.9 1 23 198 220 198 220 0.98 3 11 0.00015 0.015 16.5 2.1 2 20 226 244 226 246 0.92 4 11 6.1e-06 0.00061 20.9 1.4 2 23 267 288 266 288 0.96 5 11 0.00067 0.068 14.4 4.5 1 23 293 315 293 315 0.99 6 11 0.00063 0.063 14.5 0.9 1 23 321 343 321 343 0.97 7 11 0.031 3.1 9.2 0.2 3 23 351 372 349 372 0.95 8 11 0.0072 0.72 11.2 4.0 1 23 378 401 378 401 0.97 9 11 0.00011 0.011 16.9 0.2 1 23 409 431 409 431 0.94 10 11 0.044 4.5 8.7 0.3 1 23 437 459 437 459 0.96 11 11 3.8e-05 0.0038 18.4 0.5 1 23 465 487 465 487 0.97
Sequence Information
- Coding Sequence
- atgacCAGCATTAAAGTAGAATATTTATCTGGAGAATTGGAAAATGACATACCACCATCAGGATCAGCAGCATATCATGAACCTGATAAATGTGGAGAGGTTTTTGTAACGAGAAGAGGGATATTTTCCTGTTTCTGcattgtttgtaaacaaaattttgaagaaattcaTCAATTTACAGaacatatattaacatttcATCTTAAACATGATTTTACGTcatctgaaaataatttattagattttaaaaaagatattaatggtaacaaaaagtataatattaataaacccCCAATAACTGATAATTTACTATCTAAAACAAATCAACCTGAAAAAATAAACATAGCTTGCTTAAAATCATCCTTAGAAACAAATGTTGAAATAAAACATTCAAATCAACTTATATTTGATCCACTAGAGTGTGATTATGAAGGAAAAATAGCGACAGAAAAAATTAAAGCATCTACAGGCGATATTTTATGGGAACTAGAAGTATGTGTAGGAAAAGAAATGGATGAGATTTCAAACTATTCGGATGATGACGAAGAAACTTCAGATTTTAATGAAGCTGAAATGGACGAAAAACTTCCTTTTAAATGTGACATATGTAATAGGtcgtataaattaaaaaatgcatTTATTGCTCATAAAAAGCGCCATGACAATGTAATGCCTAGTTGTAAACATTGTggtaaaaattttgtagataaacAATCTTTTAAAAGgcataatcaaattttatgtgcaCAACGAAAAGAACTTGGTGTTAAAAATACTTCTAAAAATTTACCagatattaaatgtaaatattgtcccaaaatatttaaaaggtacTCGTCCCTTCAAAGTCATGAAGATCGTCATTTAAATTCCCCCTTCAAATGTGAACATTGTCCAAGGACTTATATGATGAAACATTTATTAGATGATCATTTAAGAACACACACTGGTGAGAGACCCTATAAATGTGAATATTGTGCAGCAGCATTTACccatataacaaatttaagtCGTCATAATTTAATACATGTTGGTAAAAAGACAGTTATTTGTACTTTTGGTTGTGGTAAAGCATTTTATAAAGAACGTGAGCGTATTGGACATGAACGGACACATACGGGAGAAAAACCATTCGTATGTGAATTATGTGGACGTTATTTCGCATACCAATGTAAACTTAGCTTGCACAAGAAACGTTTTCATATGGATAAGAAGAATTGGCCACATAAATGTGATCAATGTGGTAAAGCTTTTATTGCGCCAAAACAATTGCGAGAACATGCTGTCGTACATACGGGTGAGAAACCATTTGCATGTGATCAATGTCCTGGTAGATTTAGTAAAGGTACTGGATTAAGAGagcataaaaaattacatacgGGTGTTAAAAAGCATGTGTGCACAATTTGTAATAAAGCATTTGCACAAACAGCTGGCTTGTACGGTCATATGAAATCGCATggaataattaaagaaaatgccgagattagttaa
- Protein Sequence
- MTSIKVEYLSGELENDIPPSGSAAYHEPDKCGEVFVTRRGIFSCFCIVCKQNFEEIHQFTEHILTFHLKHDFTSSENNLLDFKKDINGNKKYNINKPPITDNLLSKTNQPEKINIACLKSSLETNVEIKHSNQLIFDPLECDYEGKIATEKIKASTGDILWELEVCVGKEMDEISNYSDDDEETSDFNEAEMDEKLPFKCDICNRSYKLKNAFIAHKKRHDNVMPSCKHCGKNFVDKQSFKRHNQILCAQRKELGVKNTSKNLPDIKCKYCPKIFKRYSSLQSHEDRHLNSPFKCEHCPRTYMMKHLLDDHLRTHTGERPYKCEYCAAAFTHITNLSRHNLIHVGKKTVICTFGCGKAFYKERERIGHERTHTGEKPFVCELCGRYFAYQCKLSLHKKRFHMDKKNWPHKCDQCGKAFIAPKQLREHAVVHTGEKPFACDQCPGRFSKGTGLREHKKLHTGVKKHVCTICNKAFAQTAGLYGHMKSHGIIKENAEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644497;
- 90% Identity
- -
- 80% Identity
- -