Este000832.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Empis stercorea
Gene Symbol
-
Assembly
GCA_949752835.1
Location
OX457085.1:9309482-9315040[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 4.8 4.9e+02 2.3 1.9 1 20 72 91 72 93 0.90
2 19 2.4e-05 0.0024 19.0 1.1 1 22 236 257 236 257 0.95
3 19 0.014 1.4 10.3 0.6 2 23 284 306 283 306 0.95
4 19 1e-05 0.0011 20.1 2.8 2 23 320 341 319 341 0.97
5 19 0.0009 0.091 14.0 0.5 2 23 362 383 361 383 0.97
6 19 0.022 2.2 9.7 1.8 1 19 435 453 435 456 0.94
7 19 0.00025 0.025 15.8 3.6 1 22 463 484 463 484 0.95
8 19 7.2e-06 0.00072 20.7 2.9 1 23 561 583 561 583 0.98
9 19 2.3e-05 0.0023 19.1 0.8 2 23 610 631 609 631 0.96
10 19 0.016 1.6 10.1 1.7 1 23 637 660 637 660 0.97
11 19 0.13 13 7.3 0.9 1 23 670 693 670 693 0.96
12 19 0.0072 0.72 11.2 0.7 1 23 729 751 729 751 0.99
13 19 0.0094 0.95 10.8 1.8 1 23 757 780 757 780 0.95
14 19 0.00042 0.042 15.1 0.8 1 23 789 812 789 812 0.97
15 19 0.14 14 7.1 0.5 1 23 818 841 818 841 0.95
16 19 1.2e-05 0.0012 20.0 4.1 2 23 869 890 868 891 0.95
17 19 1.8 1.8e+02 3.7 2.6 1 19 897 915 897 920 0.78
18 19 0.00034 0.034 15.4 0.9 1 23 971 993 971 993 0.95
19 19 2.5e-06 0.00025 22.1 3.9 1 23 997 1019 997 1019 0.99

Sequence Information

Coding Sequence
ATGGAAGAGAACAATTCTAATGAAATATTAACcacaataaatacaaataattctaattctaatgataatagtaatagtaattttccattaattataaataatgttaaacgtGAAATTGATATTGATTTTGAAGATGAAAGACTTGATACaaaagatgaaaattatcaTTCAAAATGTGGTGAAATATTTGTATCAAAAGATAAAGAATTTACATTTCATTGCAGTATTTGTAAtgagaattattttaattttaattatttctctgAACATGTTCTATATGATCAAAATCATGCAAAtcaattagtatttttaaataattgtacaaataataatagtaataattttattataccatcATTACCATTACTACTGCCATCATCATCAGTTACACTTGCAAATAATCCATTTCGTGACTATCCAGATTgtgaaaatattgttaaaactGAATTAACAGaagatgaaaaatatattgattatTGTGAtgaaaaatcatcatcatcaaatgtTTTTGTTGAGGATGAAATGCTAGAAGTTATATCAGCGCCACCAGCTGGATTCTATCAAAGTAATGAATTTAATGAACAGCAATCTGATTACTCCGAATTAAATGATGAAGAACCAATAATATTGGCAAATTTACGTGAAGAAATTATGCAAGaagaaatttctaataattcaacaggtaataataattatgctGGTTTtcataaatgtaatttttgtgaTAAAGAATTTTCACGTGCAtggaatttaaatattcatttgaaacgttgtaaattaaatatcgGAAAAATTGATTATCAACAAACTCAATCAAATAATAAACCAGATTCAACAGCATTTAAAATTATGTGTCCAATTTGTAAAATGTCCTTTCAACgtgaagtaaatttaaattttcatttaaaaaaatatcataaaaatactGTATGGTCACATACAGAAGAAAGTCTTTTACGATGTGATTTATGTAATACATCATTTAAACGTCGTGAATATTTACGAAAACATATTAAAAGACATATGGCTAAATATCGAAAACAATCATTTTTACCAAATCCAATAGCATCTGATAATAAATTGGAATGTAAagaatgtaatttaaaatttgatgaaGAATATCAATTGTTTGCCCATCAAAGTACACATTTATATACAGATTCAATAGAAACAAATGAATGGgatacaaaattttcatctaATGTAGATTCTAGTATACCAACAACAAGTTATCGTGACAATGAAAATATTCCATTTGAATTTGTTGATAATTCAacatttgataaaataaataatccaCAATATACATGTGAACAATGTGATCGTACATATAATAGCGAAGaatcatttaaattacataattgtaTTAATATATTTGATAGACCACATCAATGTTTAACTTGTAATAGAAGTTTTATGTATCAATCATATTTAAAAAGGCATATGAAAAGATGTTcaaatagaaattcatttaatgaaacaacagataataaaaataatttagatatatTTGATAATTATGATAATGATTCAGAAATAAGATATGaggaaaattcaattaaaaataatttttcatcaattcCATCAACTGATAATGAACAATTACCAACTACACCAATTAAATCAACAACAAGTTCACCATCGAAACGTAGAGGTAGtggtaatttattattaaaattatttaaatgtaaattttgtaaaaaagtctttagatcaaaaattaatttacaaaatcatTTAAGTATTCATTTAAAGAGTCAAAATAAAAGTATTATAACTGAAAATATGAcaacaataaataaactacaattaACGCCACCATcattgaaatgtaaaatttgtggtagaaaatttaagcaaaaaatttctttaatgatACATGAACGTGGCCATTCTGATGATAAACCATATGAATGTAATTTAtgtcaattgaaattttatacacaaggttatttaaattttcatcaaaaaagtatacataaaatttgtacAACAATTAGTAAATCATTTAATTGTGAAATTTGTAatggtaaatttttaacaatatcaCTTTTACATATTCATATGAATAAAATTCATCTAAAAGACGAAAATACATCTGAAGAACTTGAAAAATCTAACAAAAATCCAgcagaatataaaaaaattggtgaaaatTCATCAAATTCAAGTGATTCAACGAAATATAAATGTCGATTTTGTCCTAAACTAATAAATCGTcgtacaaatttaataatacatgAACGTATTCATTTGGGTCAGCGACCACATTCATgtgaattatgtaataaaacaTTTCCATCAATTAGTTATGTTAAATTACATAAGAAAAATGCTCATAATATTACAGTACCAAGAATACAATATCAATGTGAATATTGTCCAAAAATTACTAcaactgaatattttttaactttacatattaataatacaCATCGTGAAGAATGTCCCCATGAATgtaataattgtttaaaaagATTTGCAATTATTGATGATTTAAATATGCATTCGAAAATTGAACATTCAACATTAAATGAATctgtaaatattaaatctactataaatgaacaaaataatggaaaagaaaatgatgagaataatttaaaatgtaattattgtTCAAAAAGttttagtaatttatataattttaatattcatttacgTAATCATCATACTGGTGAAAGACCATATTATTGTAGTTTGTGTGATAAAAATTTCTCATGTGGACCATATTTATGGAAACATAATCAATTTTGGCATACAGaagaaaaaacaacaacaactaacttaacaaaaatattaccaattaattataataagaaaatcatCTATCCAGAAAAAGATTTAACAGCTACTTCTTCATCATCAACAAAGACGAAAAATCCAAAAgaagattattatttatatgtacatgcATGTGAAATTtgtggtaaaaaatttaaaaaaattgcttattTAAAAATGCATGTGGCCAAACATACTGATACATATAAATGTGAAATTTGTGGTAAACGCTGTTCAAGTTCACACAATTTAAATGTTCACCAACAAATACATGTAAATGATAAAGGTGaatcaaaaattgataaaaatgaaattataacacctacaaaaaatgaaacatctgataatttattaaaagctGTTAATtcatgtattaaaaataaaatgagtaTTATTGGAGCATCGAAATTTTATAATCTTGATTTTAGAATGCTATATAAAAATGTAGCAATAAAACGAAgagaattaaatgaaaaattaaatataaataatgctAAAACTCAAGAAACATTTAATATCGATGCAAAACCATTTGATATTATTAATGAAGAAAAATCACCAATTGCTAGAATTTCGAAATCTAATAGATACCATACAAATCGTAaacgaatttataaaaaacgatcATCAACAGCTTTAGAAAATTCGAAATTCCGTCAAGAAGGTACAAAAGAAAGAGAAGCATTAATTAAAGCTGTTCGTTTATATGAAGCTGGTGAATTATCACAAGCACAGGTagcaaaatcatttaatatatcTGTAGCATCATTATGTCGCCATATGAGTACTGTACCAAGAATTGGTGAAACACAAGAGATTTTATCATCAAATGAGATTAATAATAGTATAGTAGAAATTAATAATGAGAAGTCAATAAAAGTTCCAACAGATTTAAGTACATGGTATACAGAAAATTCATCAAATTCAGATAATGATGATATGGAAATGGGAGAAGTTATAAAAGCAGAAGAAtgtttagataatttaaataaatccgagaatattgattttaaagaaattcGTAAAATTTTATCTCAACCATCAAAATCACTTTCAACAATTAATGTTGATAATAATTTGGAACAATTTAATGATGGAAAAAAAGATAATACTGATTTTGAAATTGACACAGATTATCAAAAATCAATAAAAGATATGGATGATTATAAATTCGATAATCAACAAAATAGTGTACGTCGGCATccaattgaaaaaatattacaagCTGTTGAAGAATATAAAAAAGGTGGTGTGTCACAAAGTAAAATTTgtgaaacatataaaatttcctTATCAACATTGAAACGTCATCTAAAGAAAtcaaaaaaaccaatttatcCGCATGATAATATGATGATGTATCAGCCAATGAATATAACTAATCAATCAGATAATCAGACAacacaaattaaaaatgaaatcaatCCATCATCGGAGAATTTAATAAAAGCTGTTAATTCTTGTCTTAAGAATAAAATGAGTATTATTGGAGCatcgaaattttataatttagattttaagATGCTCTATAAAAATGTAGCAATAAAACGTAgagaattattagaaaaatcaaatgaaaatagtttattaacaaaaaatgataatcctatattaaattatgaacaaaaattatttaataatgatgataaattatcaaataatatgaAATCATCAATGTTTTCAAATACACAAACAACTgcaatgaaattattatataatcgtaaacgaaaatttaaaaaacgagTACCATATGCTTTaggaaattcaaaatttcgGCAAGAAGGTACTGCCGAAAGGGCACTATTAATTAAAGCTGTTCGATTATATCGTAGTGGTGAAATGTCACAAGTTAAAGCtgcaaaatattgtaatatttcttTAGCAACATTATGTCGTCATATGAATAGTGTATCAAAAATTGATGAAACTAAAGAATATGATCAATTCGAAGAGAGAAACATTGAtgcattaaatattaataaagattttaattGGTCAAATACttgtaatcaaattaattatactaatgcaaattttgataatattcaacaacaacaacaacaacaaataaatgaaaatgttgctgaatattttgataattcaaataaaattataaatattgatttaaatgatAGTTTACAACGACCATCGACTTTTTCTACATCACAAACTGAATATAATAAAGATGATTGTATTATTGGTGGACAATTTAATTCATCATTTCCTATACATGAATTTTCTGAACATTCGGCATTTTTTTCATCTGATGATCAATTTTCTGGTAATAAATCTGATAAAACTGATGATGTATTACAAAGATGTTCAATTGAAAAAATTGCAAAAGCTATTGAAGAATATAAAAGAGGTGGTGTATCACAaagtaaaatatgtaaaatgtaTAGAATGTCATTATCAACATTACAACGTTATTTAAAAGATGAACAAAAACAACCAGTATtaccaaattataataaaccaACAACAATTATACCATCAATATCATcagcatcatcatcaacaatatcaacaataaatcaagataaaaattataatgatgagAATTTATTAAAAGCTATTTTAGCTGTACGTAATGAAGGACTTAGTCATTTTGATGCAGCAAATGCACATAATGTATCTGTATCAGCATTATATTTATCATTAACAAGAAATGAAGATAACCAGTAA
Protein Sequence
MEENNSNEILTTINTNNSNSNDNSNSNFPLIINNVKREIDIDFEDERLDTKDENYHSKCGEIFVSKDKEFTFHCSICNENYFNFNYFSEHVLYDQNHANQLVFLNNCTNNNSNNFIIPSLPLLLPSSSVTLANNPFRDYPDCENIVKTELTEDEKYIDYCDEKSSSSNVFVEDEMLEVISAPPAGFYQSNEFNEQQSDYSELNDEEPIILANLREEIMQEEISNNSTGNNNYAGFHKCNFCDKEFSRAWNLNIHLKRCKLNIGKIDYQQTQSNNKPDSTAFKIMCPICKMSFQREVNLNFHLKKYHKNTVWSHTEESLLRCDLCNTSFKRREYLRKHIKRHMAKYRKQSFLPNPIASDNKLECKECNLKFDEEYQLFAHQSTHLYTDSIETNEWDTKFSSNVDSSIPTTSYRDNENIPFEFVDNSTFDKINNPQYTCEQCDRTYNSEESFKLHNCINIFDRPHQCLTCNRSFMYQSYLKRHMKRCSNRNSFNETTDNKNNLDIFDNYDNDSEIRYEENSIKNNFSSIPSTDNEQLPTTPIKSTTSSPSKRRGSGNLLLKLFKCKFCKKVFRSKINLQNHLSIHLKSQNKSIITENMTTINKLQLTPPSLKCKICGRKFKQKISLMIHERGHSDDKPYECNLCQLKFYTQGYLNFHQKSIHKICTTISKSFNCEICNGKFLTISLLHIHMNKIHLKDENTSEELEKSNKNPAEYKKIGENSSNSSDSTKYKCRFCPKLINRRTNLIIHERIHLGQRPHSCELCNKTFPSISYVKLHKKNAHNITVPRIQYQCEYCPKITTTEYFLTLHINNTHREECPHECNNCLKRFAIIDDLNMHSKIEHSTLNESVNIKSTINEQNNGKENDENNLKCNYCSKSFSNLYNFNIHLRNHHTGERPYYCSLCDKNFSCGPYLWKHNQFWHTEEKTTTTNLTKILPINYNKKIIYPEKDLTATSSSSTKTKNPKEDYYLYVHACEICGKKFKKIAYLKMHVAKHTDTYKCEICGKRCSSSHNLNVHQQIHVNDKGESKIDKNEIITPTKNETSDNLLKAVNSCIKNKMSIIGASKFYNLDFRMLYKNVAIKRRELNEKLNINNAKTQETFNIDAKPFDIINEEKSPIARISKSNRYHTNRKRIYKKRSSTALENSKFRQEGTKEREALIKAVRLYEAGELSQAQVAKSFNISVASLCRHMSTVPRIGETQEILSSNEINNSIVEINNEKSIKVPTDLSTWYTENSSNSDNDDMEMGEVIKAEECLDNLNKSENIDFKEIRKILSQPSKSLSTINVDNNLEQFNDGKKDNTDFEIDTDYQKSIKDMDDYKFDNQQNSVRRHPIEKILQAVEEYKKGGVSQSKICETYKISLSTLKRHLKKSKKPIYPHDNMMMYQPMNITNQSDNQTTQIKNEINPSSENLIKAVNSCLKNKMSIIGASKFYNLDFKMLYKNVAIKRRELLEKSNENSLLTKNDNPILNYEQKLFNNDDKLSNNMKSSMFSNTQTTAMKLLYNRKRKFKKRVPYALGNSKFRQEGTAERALLIKAVRLYRSGEMSQVKAAKYCNISLATLCRHMNSVSKIDETKEYDQFEERNIDALNINKDFNWSNTCNQINYTNANFDNIQQQQQQQINENVAEYFDNSNKIINIDLNDSLQRPSTFSTSQTEYNKDDCIIGGQFNSSFPIHEFSEHSAFFSSDDQFSGNKSDKTDDVLQRCSIEKIAKAIEEYKRGGVSQSKICKMYRMSLSTLQRYLKDEQKQPVLPNYNKPTTIIPSISSASSSTISTINQDKNYNDENLLKAILAVRNEGLSHFDAANAHNVSVSALYLSLTRNEDNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00644008;
90% Identity
iTF_00644008;
80% Identity
iTF_00644008;