Este008550.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- -
- Assembly
- GCA_949752835.1
- Location
- OX457085.1:74048232-74048681[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-10 1.4e-07 31.9 0.0 7 36 17 46 13 51 0.91 2 2 0.87 1.1e+03 0.2 0.1 31 42 133 144 132 147 0.81
Sequence Information
- Coding Sequence
- ATgggaaaaatagaaaaagaaaagaaatattcaGCGGACGGAGTAATTAAAGCCATTGAAGACATTCGCAATGGAATGACAGTATATAGTGCCAGTAAAAAGTACAATATACCAAAAACCACGCTATTGTATAAGTATACTGATGGGGCACGACCTATAACTGGTAAATCTGGCCCGCCAACGGTTTTGTCCCAAGAAGAAGAACAGATTTTGGTTGATTGGATAATCCAAATGGGCAAAGCGGGATTTCCAATAACTAAAATCCAACTTATAGATAGCGTTACGCTGTTAATAAAAAACCTATGGAAAGAATCCAATTTTAAAAATGGAAGACCTGGCCGTGCATGGTATGAAGGATTTTTGAAAAGGCACAGCGAAATATCTCATCGTGTTACTAAGAcacttcaaaaatataaatccgTTATAACTGAGGAAAAACTACGTACATAG
- Protein Sequence
- MGKIEKEKKYSADGVIKAIEDIRNGMTVYSASKKYNIPKTTLLYKYTDGARPITGKSGPPTVLSQEEEQILVDWIIQMGKAGFPITKIQLIDSVTLLIKNLWKESNFKNGRPGRAWYEGFLKRHSEISHRVTKTLQKYKSVITEEKLRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -