Este008146.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- -
- Assembly
- GCA_949752835.1
- Location
- OX457085.1:71130789-71131259[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-13 4e-10 40.0 0.0 4 43 9 47 6 48 0.92 2 2 8.2 1e+04 -2.9 0.0 35 43 112 120 110 120 0.78
Sequence Information
- Coding Sequence
- ATGTCAAAAAAATACACAGAATGTGATATGCAATCTGCTTTATCGGATATTAAAAGTGGTTTGTCAATTCGGAAAGCttcaaaattgtataatattccTAGACCGACCCTCCAAAATAGAATCCATGGAAGGACCAAAAAATCAGGCTACGGACCTTCTACTATATTAACGAAAGAAGAGGAAGAAAAGATCGTTAATTGGTTAGTACTAAACCATTTGAAAGGATTTCCTCGTCGGAAGCACGACATTAAATATGTAGTAAAAGAATTCCTGGAAGCGTCACCTAGAGAAAATCCGTTTAAAGATAACTTAGCAGGTGATACATCGTACAATTCATATCTTCGTCGTCATCCAGAATTAGCTGTAAGAACTCCGGAAGCTATCACCTTTTATGTGCAGAAATCCTCTAACAAATGCTCAAAGTGTTTTCAACAAAAAACACGCATCTGTACGAGTACTAGTAGAAAATAG
- Protein Sequence
- MSKKYTECDMQSALSDIKSGLSIRKASKLYNIPRPTLQNRIHGRTKKSGYGPSTILTKEEEEKIVNWLVLNHLKGFPRRKHDIKYVVKEFLEASPRENPFKDNLAGDTSYNSYLRRHPELAVRTPEAITFYVQKSSNKCSKCFQQKTRICTSTSRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -