Este020573.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- bab1
- Assembly
- GCA_949752835.1
- Location
- OX457088.1:2436183-2438573[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-13 6.3e-10 39.4 0.0 3 45 444 486 442 486 0.92 2 2 0.55 7e+02 0.8 0.8 4 20 590 605 589 605 0.91
Sequence Information
- Coding Sequence
- atggGTAGCAGCGAAGGACAAACATATTGTTTAAGATGGAACAATCATAAATCAAATTTAGTTGAAATATTAGATGCATTAATTAAAATGGAATCATATGTTGATTGTACAATTGTTGTTGATGATCAAGTACAATTTAAAGCGCATCGTGTTGTATTAGCAGCAAATTCACCatattttcaatcaatattACAAGATGTACCAATGGATCATTGTAGTATATTATTTCCTGGTGTACAGGCATTTGAAATGCGTGCATTACTTGAATATATGTATACGGGTGAAGTAAATGTAACACAAAGtcaaataccaaaaataatgaaaattgctGAACAATTAGAAGTTAAAGGTTTATTTGATATGACTGATTTAAaagctaaatttaataaatatgatgaacaaacaacaacaacagcaacaacaacatcatcatcatcatcatcaacaacaacaacaacaaatcatcatcatcataattatCCATCATCACAACAATTACCATCAACACATCATActacaacaacatcatcatcatcatcaatattttcaaataataataatacagaaCAAAGTGGTAGTAGTACAagaaataatgatgataatcgTCATATACATTCGAATATTGTGGGTGGTGGTGGTAGTAGTGGTGATTCACAACATCAGCAACAACAATCTGTTGAATTACCACATCACCATcatcaccaacaacaacaacaacaatcatcCCCAGTAATTACAACATCAACAAATATAACAACATCAGCACAAAGTAGTAGTGCTTCACCgccatatacatataaatcaCCATATTCTAGTCTATATACAAAAAGTCCAGGACCATCAACATCAGATCGTCAACATTGGCCATCAATATCACCATCATCTGTAATACCAAATGTATCAATaccaacaacagcagcagcagcagctaTGTTAAGTTCAGTATATGAAAGTGCAGCTGATATGAATCCattaaaacgtaaaaaattATCATCGATCTCAAGTATGTTAATGTCACGAGATACACCAATATTAAGAAATGTGTTAGCACAAACCCATGCAGCTGATTCATCACAACCAATGCCTTTAGTATGTCAATCATTGAAACAAGAACGATCTGAAAAAAATACATCATCATCTGTAGCATCGGATTATAGTAGTAATGAGAggaaatataaaCATGATGAACCACATTCACCATATACAGATAAATCATTTGAAGATGATGGTTTAGATGGTGAACCAAAATATTTAGGTGATTCACGATCATTTTCACAACAATCCAATTCACAAAAACCAGAATGGAAACGATATAAACAATATACACGTAGTGATATATTAGCAGCTATTGAATGTGTACGTAATGGTATGAGTGCATTACAAGCATCACGTAAATTTGGTGTACCATCACGAACACTTTAtgataaagttaaaaaattaggTATTACAACTGGCCGTCCAATGAATCGAACAATAAAACGTAGTCCAAGTAGTGGTAGCAGTCCAGCTAGTTTTCCATTTGGTTTAAGTGGAACAAATAATCCATATGGACAATCATCCGAATCAATTTTATCACAAATACATGATTCAAATGaacatcaccatcatcatcatcatcatcgtgaTAAAGATCGTGGTGAACATCATCATATACCATCAAATATACCACATCCAGCAGCAGCAGCACTATTAGATCCAGCATTTTTACAACAAGCATTTGAATCACGTGGTGGTGATATTGCTGGTCGTGAAGCATTACATGCTATGGCATTAGCAGCTGCTGCACATGCAGCTGTTAATGGTATATCAACTAGTCCAGGAACAAATGGTACAGCACGTTCACCAAGTCCAGGATTTGCCATGAAATATTCTAGATCTCAAAGTACACCACCACCgccaccatcatcatcatctcaACTAACACGGGAGAGAGAAAGAGACTTTATGGAAAGAGAAATTGAACGTGAAAGGGAACGTGAATTAGATGAAGAATATGATAGAGAACACGCGCAACGTGAACATGATGATAGGGATCGTAATGAATTAGATCATGAAACTGAAGAAGATGAAAATCATGTTGAAGATTTATCAGTATCTAGAAAAGAAACACAATCACCATCATTATCACATAGATCCCCAACACGACCACCATCTAATCATCATTCCTATGGCACAACATCAATACAACAATCATCTGGTAGTGTTATTGTACCACCAATGACAAAATTATCACCAAATGGTGgtgaagaatttaataaaactaatattGAACTTAAACGTGAAATATTAACAACAACTGATGATTCtagagaaaataattaa
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKAKFNKYDEQTTTTATTTSSSSSSTTTTTNHHHHNYPSSQQLPSTHHTTTTSSSSSIFSNNNNTEQSGSSTRNNDDNRHIHSNIVGGGGSSGDSQHQQQQSVELPHHHHHQQQQQQSSPVITTSTNITTSAQSSSASPPYTYKSPYSSLYTKSPGPSTSDRQHWPSISPSSVIPNVSIPTTAAAAAMLSSVYESAADMNPLKRKKLSSISSMLMSRDTPILRNVLAQTHAADSSQPMPLVCQSLKQERSEKNTSSSVASDYSSNERKYKHDEPHSPYTDKSFEDDGLDGEPKYLGDSRSFSQQSNSQKPEWKRYKQYTRSDILAAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTIKRSPSSGSSPASFPFGLSGTNNPYGQSSESILSQIHDSNEHHHHHHHHRDKDRGEHHHIPSNIPHPAAAALLDPAFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGISTSPGTNGTARSPSPGFAMKYSRSQSTPPPPPSSSSQLTRERERDFMEREIERERERELDEEYDREHAQREHDDRDRNELDHETEEDENHVEDLSVSRKETQSPSLSHRSPTRPPSNHHSYGTTSIQQSSGSVIVPPMTKLSPNGGEEFNKTNIELKREILTTTDDSRENN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01297621;
- 90% Identity
- iTF_00644237;
- 80% Identity
- iTF_00644237;