Este000857.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- Zbtb8a
- Assembly
- GCA_949752835.1
- Location
- OX457085.1:9734612-9736096[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-12 1.9e-09 37.9 0.0 4 41 308 345 306 348 0.90 2 3 0.048 61 4.2 0.0 27 38 378 389 376 392 0.89 3 3 8.4e-17 1.1e-13 51.5 0.0 5 40 418 452 417 454 0.94
Sequence Information
- Coding Sequence
- atgaaCCATTTAAAATGGTTAGGGCATGCATCCACTTTATTGGATATgcaaaaaagtttaaaaagcGGAAGTGAATTGTGTGATGTGAAACTTGTTAGTGGCAATGGAAAAATTATGTATGCACACAAAGCAATTTTATTCTCATCAAGTGATTTCTTTAAaaccatttttaaaaatatatctgaTACAACAGAAATATGTACAATTTTAATACCAGATGTTAAAGATAATATTCTTAGTGATATATTGGATTTTATTTATACTGGTTCAATCAGTTTACCATCCATTAATTTATCAGAATTCCttgaaaatatcaatatattaGGCATTAAAAGTGCAATAAGCTTTGAATGCCATGTAACAACTAAAGGTAAATTAAATAGTAAAGCTgaagataatataatttttgaacatACTGTAATCCAAGAGGATGCTGATGATAATGTTGATAGAGATAATATTATTGAAGAAGATGAACAGGAGGAAGAGGACGAAGaaGAAATGGATACTATAGATTCATCAGTTGATACAGATAACAAAAGTATTCAATATTTAGAAGTATTTAATGCTGGAGATAATAAAATTGGACAATATGCAATACAAAGTAGTAGTATTGAAGAAAATGCTACTGGCGACTATATATTAACTGAAAACGCTGATAATACATTTACATTAACTGaacaaaatattcaattagATGATCCTCTTAAAACAATTGAATCCCAATCTGATATATCATCATCATGTACACCAAATACACAATCTATTAAAATCGGATCAGTATCTGCAATTAAACCAGCTACCGTTTCGgctccaacaaaaaaaaaatttggaaaacaaaatattaaaaatgaaaattcagaTATTTATAGTACGGAAGAACCAATTAGTAAACCTACTACATCTTTAGGCCGTGCGCAAGCATTTGATGGGGCTGTACGAGCTGTCATTAATGAGGGTATCAGTTTACAAAAGGCTGCTGAAAAATTCCACATATCTAAAACGGTTTTATGGCGGCGTGTTAAAAAACAACCaggatataataaaacataccgGGAAAATCCAATTATTGAAGcagctataaaaaaattagaaaaaggtGACTCATTAAAAAGTGTTAGTTTAGCATTAGAAATACCAATGTCAACTTTGCATCGTCATAAAATGCGTTTAGCTGATGAGGGTAGATTACCAGCCcatatacaaattaaaagaaGAGACTTGGAATCAAAGGCGAACTTAAAACTGAAGTTAATCAAAGCTGTTGAAGCATGTATGAATGGTATGTCACAAAATCATGCTGCTGTTGTATATGAAGTGCCAAAATCAACACTTTGGagacatttacaaaaaaaagttcTAAACGAAAAAACTGATGTTGATAAAAATGATGTTACAGAAACTGTGGAGGATAAAATTATGCCTTAA
- Protein Sequence
- MNHLKWLGHASTLLDMQKSLKSGSELCDVKLVSGNGKIMYAHKAILFSSSDFFKTIFKNISDTTEICTILIPDVKDNILSDILDFIYTGSISLPSINLSEFLENINILGIKSAISFECHVTTKGKLNSKAEDNIIFEHTVIQEDADDNVDRDNIIEEDEQEEEDEEEMDTIDSSVDTDNKSIQYLEVFNAGDNKIGQYAIQSSSIEENATGDYILTENADNTFTLTEQNIQLDDPLKTIESQSDISSSCTPNTQSIKIGSVSAIKPATVSAPTKKKFGKQNIKNENSDIYSTEEPISKPTTSLGRAQAFDGAVRAVINEGISLQKAAEKFHISKTVLWRRVKKQPGYNKTYRENPIIEAAIKKLEKGDSLKSVSLALEIPMSTLHRHKMRLADEGRLPAHIQIKRRDLESKANLKLKLIKAVEACMNGMSQNHAAVVYEVPKSTLWRHLQKKVLNEKTDVDKNDVTETVEDKIMP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644267;
- 90% Identity
- iTF_00644267;
- 80% Identity
- iTF_00644267;