Basic Information

Gene Symbol
Arid2
Assembly
GCA_949752835.1
Location
OX457088.1:4830907-4838634[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 5.3e-23 82.0 0.1 2 89 43 128 42 128 0.95
2 3 5.2 2.1e+04 -3.2 0.1 37 56 574 593 555 614 0.68
3 3 8 3.2e+04 -5.2 2.8 33 51 1684 1693 1655 1727 0.54

Sequence Information

Coding Sequence
ATGACAACAACAGAATTAAAAGAACCATCAACACCGGCCACAGCACAAAATGAAGATAGTTCGACTAGTAAaagtgtaaatttaaaaaaaatatcacgtGCTGAAAATGTACAACAAGATCGCGACAAAGAATCTTTTTAtaaggatttacaaaatttccatGAAAATAGAAataCACCAATTACACGTTTTCCAAAAATCAATGGCAAAGAAGttgatttacataaattatattcagAGGTAATAAGTCGTGGTGGCTGGTTAAAAGTGAATATTCGTAATGAATGGGAGGAAATGACATCTGTATTAGGTTTTTCACAAAAATGTGTAAATGCATCAGTTGCTATAAAACAAATCTATGCAAGATTTTTAGATAAATatgagaaattaaattttcttggtGAAGATCCAGATCGTAATGATGATATTGATGATGAAGGACGTCATAAAAAATGgtcaacaaaaaattgtatgCAAATAATACCAAtgacatataattataatcaacaTAATGTTTCGGAACAGACAAGAATTCAGCATAAATTATCAAcagatttatataaaagttcAGAATATGAGAAacttttattatcattaatgtCACCATTACCAAATGAACAAGATTTTGCTATAAATGTTTGTACATTAATGGCAAATGAAAGTAAACatacattaaaaattgaaaattgtccAAAATTATTGGATTGTTTAATGGGACATGCAGGAGTTTTTTGTCATAtaactaTGCGAAATCTATTCGAAGATTTCTACACGAATATTCGACGAAATTCTTTACAATCTTTTTGGAATGATACACTTGAAAATAATTCACAAATACTTGAATTATCTTATGAAGATTGTTTTCAATCAAACGAAGAACCAAAAAATTTGGATAAAATACGTCGTCGCTTACGAGGAGccaatcaacaacaaaaacaaaccaACATTGAAAATGATAACGAGTTATTTGCTTCTGAAGatgaaattgattataataaattggaTTTTTTAGCATTAGGCCGTAGACTAGGTACTCATGAATATGTTGGCCAAAGAATACAACAAGTTGCTTccattataagaaatttaagttttttcgAAGAAAACATTTTAGTTTTAGCTAAAAATCGTACATTTATACGATTTTTGGTAATGTGCTCGAATGTTAGATGGGGTAATTTACATCATATGGCATTAGATGTTTGTGGTAATATTGCAACAGAAATTGAATTATTAGATCCATCAACAGATGAATTGACACGTTGTTTATTGGCAACAATTTGTGATGGTTTAGAGGGACAAGATCGTGGTGTAATAATAAGTtcattagaaatattaaataaattaagccAAAAAGATTCACATAAtgattatttacataaatgtttagatcaaaaaatatataatcaaatttgtttatatttatcattaaatgaTATTATGTTACTTTTATATACATTAGAATGTATTTATTCATTAAGTTCATTGGGTATTCGCGCTTGTAATTCATTGATACAAGTTCGTGGTATTATTGATACATTAGTATCATTAATAACTGTTGAAGCACAATCATATGGACCAGATGGTTGTATTTTAATGCGTGTGGTTGAAACTGTACCAGGTAATATGTTACCAATGGTAGCGAAAAATATTGCTAATTTGCAAAATGTTGCAATGCATGGTCAAGTTAGTATGCAGCAtttacaacagcaacaacaacaacaacagataCAAAATCAAGGAACAATGAATCAAGTACAACAGCAGTCTCCTGTTAACCGTTTGCCAGCACAAGCAAATTCACCAACAACAACTCCAGTTGTACCAACAGTACAAGCTACTAATCAATCCACTATTCAAAATAAACCAGTACAAAGTTTACAAGAAAATGAACAGTTTGCAATATCATGGTTAACAGCTACATTTGAAATGGCACCATCGGCCGCATCACGTGTTGAACAAcaggaattatataaaatgtatttatcgGCTATACAGAAAACAGGACGTCGTGGATGTGTAACACAATCTCATTTTCCACGTATAGTTCGATCAATATTCGGTACAAATATTGGACCAACAATGTTAAAAGTAATTGATACAAATGGTGTCGAAACTAATGGTTTCTTTTACATTTGTATACGTGTTAGAGCAAATCCTTTACCATTAAAAGGTTCAATAACTATCCAACAACCAATGGTAGTTAAAACACCAATTAAATCacaaattcaacaacaacagccaattcaacaacaacagcagccaatgcaacaacaacaacaacaacaaaccaGTGGTGAATTGGTAAACAAACAAATTGGAAAATCTGAGGTGGGTTCAAAACTACaacaaactaaaataattaacacAAAACCAACAATAGCAACAGTAGTATCATCACCACAAACCAAATTATCAACAAATTCTGTTATTGTATCACAAATAATATCAAAAggacaacaaaaaaatgatcaaaataaaaTGCAAACTCAAGAAATACCTTCTAACCCAAATAATACTGTTccaattaacaataataataataataataacaatagtaATAATATCCAATCGAATAGaccacaacaaaatataattttaaataacaataacaataatgtaGCACTAACAAGTGGAGGATTAACAAAATCTCCTGTTTTACAACAACAGCAGCCACAACAGCAAAAAGGAGTTTCAAACTTAATTGTGACACAAGGGCAAATGGTTAAAACATCAATTGTACAAACATCAATGACAACAACAGCCGGAACAACATCTGGACAAATTGGTGGAACAACATTTAGCGGACAACAAAATCCTACATCATTAATTAAAAGTCTTTTGGCTAATAAGcttGCACAACGTCAAAATTTGGCCAAACAGAAAGAAATATCTGTCCAGCAGCAGCAAATTctacagcaacaacaacaacagcatcaacaacaacaactgcatcaacaacaacaacagcatcaACAACAAACACAAATAGTTTCAACACCAATTAAATTAGCTACAACAACAATTAGTGCTTTAGTAAATAATCCAATTATACAAACAACACCAGTAAAAGTTGGCCAAACAACAATTAAACCAATTAATCCAAATACAATTGAaaagaaaacaacaacaattgtACCAAGCGAAAGTATGGATACATCTTCTAATTGGGATCCAGTACCACCATTAGCACCATTAAGTGGTAATACTATACGTTCAACAATTATGattagtagtagtagtagtttAGGAGCAAATAGTGAAGATTCAAATTCAACTGGTAATAATTCTATTGCATCATCAAGTGCTATTAGTTCATCTCAAATACCAATGACAGATGATGGTGAAAATTCTGTAATTAGTTTTGAAGGTCTTTTAAtaccaaaatcaaaatcaacatcatcatcaacaattgatgatgaaaattcaaataattcatTGCATAGATCTAATTCACAAGTAATAAATGCTAATCAAATGTTAGTTGatttattagataaaaaatcACCAGATCCACCACTACATGGTATTAAACGGAAATTGGGCGAAGAAACAATTATTGTTAGTTGTGGtaatgataagaaaaaaaaagcaattggCGATGGTACATCAATAATACCATCACAAAATGCTGCTAATTTATATGCTGAAATGGCAGCGTCAATATTAGAAGATGAAGATTTAGAAGAAACACCACCCACAACAAGTACCCAACAACAATTACCAAAAACGACaattcataaaacaattgataataaacaaaaacaaattatatcaATGCCATTACAACGTCAAATTATAATGACACCAAATAGTCAAAAAATGATTATACAACAAAATTCAAAGGGATCTGGTAATATTGTTACATCAAATACTCATCAACAAGCAACAGCAACAATAAAAACAGAATCAGGTTTACAAACTATTccagtaattttacaaaaacaaattggtCCAAATGGTCAACAAATAATTCAGCCCGTTATTCAGCATCAAtcattacaacaacaacatcaacaacctACACAAACACAATATGTTTTAGCTACAAATCCACAAGGTCAAACATACTTAGTTGCACAACAAGCACCGTCGCAATCACAATCATCCCAACAGCAGCAACCTCAAACTTTAGTTTTAACACAAACGGGACAACAACAAGGTGGTACACcaacaaaaacaattattattctACAACAACAAGGTGGACCACCACAAGCTGTTGctcaacaacaaataataagcGCACCAGGTCAACCACAAAAAATGATTATGACAACACCACAAGGTCAACAAATGATTGTAACAACACAAATACCACGGCCAGTACAACATCatcaaataattatgaattcgGGCACCAGTGTTTTGCAAACTACAAGTAGTGGTAACAATAACGGAAATAATGGAAATTTACAACACCAAAATGTTGTGATTACACAATCGGGAACGGTTTTCACGCATCATCCTCAGCAACAAATGCAAAAACACATACAAATCCAGCAACAGccgcaacaacaacaacaattacaaaTTCAACAAACTATTACCCAACAACAATTAAATGCATTGCAACAGCAACAAGCATCAATATTATCTCAATTGCCACAAATTCCGGCCACTATAAAATTGCATACACATCAACCAGCTGGTTTACCATCGGTTATTCAGCAAACACAAACAACTCAAACGCAAACAATTAAAATGGTTCCAAAACAACCAGCAACAGTTTCAATAATTGCTCAAACGCCATCACAACCACCAGTTGCCCAGCAAACACAACAACACATCCAAATTCAAGGCCCAATTACGAAACAAATTACTAAAGGAACAACAATGATACAAGAAAGAAAACAAATTATTGTTAGtggaaatgaaattattaaacagCAAACTCAACAACAGCAAATTCAGAAGCAGATGCTAGCGATTTCTCAACAAAAACcgcaacaaaaaattatacaagtTCAACAACAAATTCCACAATcgcaacagcaacaacaatcaAATCATCAGCAGCAACAAATTCAACAACAGCAACCAATTCAACAGCAACAACAGTTTCAACAAGTTCAACAACAATCTCAGCAACCGCAACAAAAAACTGTAATACAACAAAATACAAATCAACATCCAGTACAACAACAAGCAAATCAATCTCAAAGTCAAATAGCTAATACTGCagctcaacaacaacaaaaaaacgttaaCATTTCACGAACCCCAACCCctacaaatattttacaaaatccaTCTGGTACACCGACTCCACCACCACCATCTTCTACACCTGGTATAGTTTCTGGTAGGCCAGTATCAACTCCCACTCCACCAATTCCCCCAATAAATCAAACTCCACCACCACCAGTCAGTCCTGCATTACCAAAACCAAAAACCGAGGaagaattaattgaattaaattggGTGTGGATATGTGATTGGCGCGGTTGTCCCCGacgaaaatttaaatctttgCAGGAAGTTTACAAGCATGCTTGTCAAGTACATTGCCCAGATAATTTAGATCCAGGTGCTGAAATATTTTGTCAATGGGGCCCTGGACAATCACTTTGTGATAATATACCAAGAAAACGTTTTTCATTAATGACACATTTGCTAGATCGTCATTGTACAATTGATAATTTAAAGGCAGCAGTACAAAGACGTTTAGTGACTGGATTACCTGCAGCACCAGGTCCACATCAACCAGTTAcgattattaaaaatacatcCGAAATTCGAGGAACTACAGCATCACCAACATTATCAACATCTTCGTCTAGTTCTGTACCATCAGCTGCAAGCGCTGCAATGCATGCCATTAAAAGGCATACAAATGACTTTATAAACCCAAAGGAGTTAATGgatgAAAATGAGGGTCCAGTAACTAAAAGTATTCGTCTTACAGCAGCATTAATATTGAGGAATTTGGTTACGTACACATCAAATGCAAAAAgaaatgtGCGATTTTATGAACCTCATTTAGCTGGTGTGGCCTTAAGTAATGTGGAATCAAGTCGAACAATTTCTCAAATTCTctatgaattaaataattaa
Protein Sequence
MTTTELKEPSTPATAQNEDSSTSKSVNLKKISRAENVQQDRDKESFYKDLQNFHENRNTPITRFPKINGKEVDLHKLYSEVISRGGWLKVNIRNEWEEMTSVLGFSQKCVNASVAIKQIYARFLDKYEKLNFLGEDPDRNDDIDDEGRHKKWSTKNCMQIIPMTYNYNQHNVSEQTRIQHKLSTDLYKSSEYEKLLLSLMSPLPNEQDFAINVCTLMANESKHTLKIENCPKLLDCLMGHAGVFCHITMRNLFEDFYTNIRRNSLQSFWNDTLENNSQILELSYEDCFQSNEEPKNLDKIRRRLRGANQQQKQTNIENDNELFASEDEIDYNKLDFLALGRRLGTHEYVGQRIQQVASIIRNLSFFEENILVLAKNRTFIRFLVMCSNVRWGNLHHMALDVCGNIATEIELLDPSTDELTRCLLATICDGLEGQDRGVIISSLEILNKLSQKDSHNDYLHKCLDQKIYNQICLYLSLNDIMLLLYTLECIYSLSSLGIRACNSLIQVRGIIDTLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAKNIANLQNVAMHGQVSMQHLQQQQQQQQIQNQGTMNQVQQQSPVNRLPAQANSPTTTPVVPTVQATNQSTIQNKPVQSLQENEQFAISWLTATFEMAPSAASRVEQQELYKMYLSAIQKTGRRGCVTQSHFPRIVRSIFGTNIGPTMLKVIDTNGVETNGFFYICIRVRANPLPLKGSITIQQPMVVKTPIKSQIQQQQPIQQQQQPMQQQQQQQTSGELVNKQIGKSEVGSKLQQTKIINTKPTIATVVSSPQTKLSTNSVIVSQIISKGQQKNDQNKMQTQEIPSNPNNTVPINNNNNNNNNSNNIQSNRPQQNIILNNNNNNVALTSGGLTKSPVLQQQQPQQQKGVSNLIVTQGQMVKTSIVQTSMTTTAGTTSGQIGGTTFSGQQNPTSLIKSLLANKLAQRQNLAKQKEISVQQQQILQQQQQQHQQQQLHQQQQQHQQQTQIVSTPIKLATTTISALVNNPIIQTTPVKVGQTTIKPINPNTIEKKTTTIVPSESMDTSSNWDPVPPLAPLSGNTIRSTIMISSSSSLGANSEDSNSTGNNSIASSSAISSSQIPMTDDGENSVISFEGLLIPKSKSTSSSTIDDENSNNSLHRSNSQVINANQMLVDLLDKKSPDPPLHGIKRKLGEETIIVSCGNDKKKKAIGDGTSIIPSQNAANLYAEMAASILEDEDLEETPPTTSTQQQLPKTTIHKTIDNKQKQIISMPLQRQIIMTPNSQKMIIQQNSKGSGNIVTSNTHQQATATIKTESGLQTIPVILQKQIGPNGQQIIQPVIQHQSLQQQHQQPTQTQYVLATNPQGQTYLVAQQAPSQSQSSQQQQPQTLVLTQTGQQQGGTPTKTIIILQQQGGPPQAVAQQQIISAPGQPQKMIMTTPQGQQMIVTTQIPRPVQHHQIIMNSGTSVLQTTSSGNNNGNNGNLQHQNVVITQSGTVFTHHPQQQMQKHIQIQQQPQQQQQLQIQQTITQQQLNALQQQQASILSQLPQIPATIKLHTHQPAGLPSVIQQTQTTQTQTIKMVPKQPATVSIIAQTPSQPPVAQQTQQHIQIQGPITKQITKGTTMIQERKQIIVSGNEIIKQQTQQQQIQKQMLAISQQKPQQKIIQVQQQIPQSQQQQQSNHQQQQIQQQQPIQQQQQFQQVQQQSQQPQQKTVIQQNTNQHPVQQQANQSQSQIANTAAQQQQKNVNISRTPTPTNILQNPSGTPTPPPPSSTPGIVSGRPVSTPTPPIPPINQTPPPPVSPALPKPKTEEELIELNWVWICDWRGCPRRKFKSLQEVYKHACQVHCPDNLDPGAEIFCQWGPGQSLCDNIPRKRFSLMTHLLDRHCTIDNLKAAVQRRLVTGLPAAPGPHQPVTIIKNTSEIRGTTASPTLSTSSSSSVPSAASAAMHAIKRHTNDFINPKELMDENEGPVTKSIRLTAALILRNLVTYTSNAKRNVRFYEPHLAGVALSNVESSRTISQILYELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00642995;
90% Identity
-
80% Identity
-