Basic Information

Gene Symbol
Jra
Assembly
GCA_949752835.1
Location
OX457086.1:4286617-4287613[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9 1.5e+04 -3.1 0.4 11 18 50 57 49 59 0.82
2 2 1.1e-16 1.9e-13 51.0 6.2 2 65 201 264 200 264 0.96

Sequence Information

Coding Sequence
atgcctggaaataataatacaaattctgataatacaaataataataacaataatatggATCCATCATtttatgatgataataatgCACAATTTGCTAGTACAAATAGTATTAAACGTCCAATGTCATTggatttaaattcaaataataaaaattctgttGCTGCTAAAAAATTACGTTTAAATGGTGTTAATGCAACAGGTCCAATTGTATTAGAATCACCCGATTtacaatcattaaaatttaatacacccgatttggaaaaatttatattatcaaataatttattggcAACACCAACACCAAGTTTGGTATTTCCGCCAACAAAGgcAACAACTGAACAAGAAGATTTCTCAAAAGGTTTTGTTGATGCACTTGAGAATTTACGAAATAGTGAAAATTCACAACAAATATGTGGTCCAATAAATaatgcaacaacaacaaatccaACAACAGCATCTGTTGTAACAACAAATGGTATGAGTGGTGGTTCAATTACTTATACAAATTTAGatGATAATTTTCCAGTTGCTATTAAAGATGAACCACAAACTGTACCAACATCACCACCATTAAGTCCAATCGATATGGAAacacaagaaaaaattaaattagaacgtAAAAGACAACGTAATCGTGTTGCTGCATCAAAATGTCGTAAACGTAAATTAGAAAGAATATCAAAATTAGAagataaagttaaaatattaaaaggtgAAAATGTTGATTTAGGTGctgttgttaaaaatttaaaagaacatGTATTCCAATTAAAACAAGAAGTTATTGATCATATTAATTCAGGTTGTAATATATCAATTTATGGTAATGGTACAACAACAATGTTACAAGCTAAATAA
Protein Sequence
MPGNNNTNSDNTNNNNNNMDPSFYDDNNAQFASTNSIKRPMSLDLNSNNKNSVAAKKLRLNGVNATGPIVLESPDLQSLKFNTPDLEKFILSNNLLATPTPSLVFPPTKATTEQEDFSKGFVDALENLRNSENSQQICGPINNATTTNPTTASVVTTNGMSGGSITYTNLDDNFPVAIKDEPQTVPTSPPLSPIDMETQEKIKLERKRQRNRVAASKCRKRKLERISKLEDKVKILKGENVDLGAVVKNLKEHVFQLKQEVIDHINSGCNISIYGNGTTTMLQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01297118;
90% Identity
iTF_00642959; iTF_01297118;
80% Identity
-