Eliv011353.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- nfxl1
- Assembly
- GCA_963932195.1
- Location
- OZ010647.1:48260416-48264825[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.38 1.9e+03 -0.8 3.8 8 19 11 21 10 21 0.83 2 17 1.5 7.4e+03 -2.7 1.8 6 10 46 50 45 50 0.89 3 17 8.4e-09 4.2e-05 23.6 12.2 1 19 56 74 56 74 0.99 4 17 0.89 4.5e+03 -2.0 0.5 1 8 99 105 98 106 0.51 5 17 4.2e-08 0.00021 21.4 8.6 1 18 109 126 109 127 0.96 6 17 0.09 4.5e+02 1.2 1.2 1 10 136 145 136 145 0.94 7 17 4 2e+04 -4.1 2.3 5 10 150 155 150 155 0.91 8 17 4 2e+04 -7.3 15.6 1 18 161 179 161 183 0.80 9 17 3.3 1.7e+04 -3.8 1.1 5 10 211 216 211 216 0.89 10 17 4 2e+04 -4.2 1.0 9 11 221 223 220 225 0.78 11 17 0.46 2.3e+03 -1.1 8.0 10 18 230 238 227 239 0.93 12 17 0.012 58 4.0 5.1 3 12 250 259 242 259 0.83 13 17 3.1 1.5e+04 -3.7 1.4 6 10 318 322 317 322 0.81 14 17 1.2e-05 0.058 13.6 4.2 1 12 328 339 328 339 0.97 15 17 3.4 1.7e+04 -3.9 1.5 15 19 352 356 352 356 0.84 16 17 0.0002 1 9.6 10.4 1 16 368 382 368 388 0.85 17 17 3.5 1.7e+04 -3.9 0.7 6 10 418 422 417 422 0.78
Sequence Information
- Coding Sequence
- atgTTTAACATTCCCAGTTTGCTAGCTACGAAAATATGTCATTCAAAATGTCCAGAATGTAAAAGACGAAGTATAAAAAAGTGTCTGTGTGGTAATGAATTTTCTGAAAGGGATTGTTCTCATTTAAAATGGCAGtgcaaaaaagtaTGTAATAAAACATTGACTTGTGGTTTACATAAATGTAGAAAAGTCTGTCATGCTGGAGATTGCGGTGATTGTCCATTAGGTTTACCAAGAGCATGTCCTTGtggaaaaaataaATCAATTGCTCCTTGTAGTGAAATTATTGATACTTGTGGAGATACATGTCAAAAGGTTTTAGCTTGTGGATTACATTATTGTACTCAGAGATGCCACAAAGGAGATTGTAGTTtgtgttTAGCAATTGTTGAGAAGAAATGTAGATGTGGATTACATAAAAAAGAGCAGCCATgtacgaaaatatttacatgcgaaacaaaatgtaaattaatgaGAGAATGCCAGAAACATTCTTGTTGTAAAAAGtattgTGATGGACAATGTCCACCATCCTGTTATCCATGTGATTTAAAATCATCAGTGAAATGCCGATGTGGTAATACATCAGTAACAGTTCCATGTGGACGtgaaaagaaaactaaaaccCCCAAATGTGTACAGTTATGCAGACTACCGTCAAAATGTCACCATGAAAATCCACATAACTGTCATATGAATGAATGTCCACCATGTGGACAAAAATGTGGTTTATTAACATCATTATGTGTTCACCCGTGCGAAGCAAAATGTCACGAtgcaattaaaatagaaatcaaAACTACAAAAGGGACAACTATTTGGGATTGGCAACAAGAAAcgtttgaatataaaaaaatgcctCATCCTCCATGCGCAATTCCTGTTATGGTATCTTGTATTGGTGgtcatgaaattattaattggcCATGTTGGAATTCAAAACCTTCCTCATGTCAACGAGAATGTGGACGACAACTTAAGTGTGGAAACCACTTTTGTACACGATTATGTCATTCTGTTACGGATTTGGCTGTACAAGATgaACAAGACGGTTGTCTCCCTTGTACCGAGGAATGTAAAGTAATTCAAccaaatTATTCATGTGGCCATAGATGTACAGCGATCTGTCATTCTAGTACATGTCCAAATCCAGAAAATtgcaagaaaaaaatgaaaatatattgtttgtGTAAAAATCTTAAAGTGGATATATCTTGTGAAAAATATCGTAATGGTACCAAATTTATTCAATGTGATGATACGTGCACAAAGAAAAAAGCAGAAGAAGATCGTATTAAACTAGATATGGCAGCTAAACTTAAGCAattagaagaagaaaaaaatcgCCTAGAATTAGagcaatttgaaaaaaatttgctaaaaagaaatataaggAGAGAAAAGCTATTGAAATTATtccgaaaaataatattgaattaa
- Protein Sequence
- MFNIPSLLATKICHSKCPECKRRSIKKCLCGNEFSERDCSHLKWQCKKVCNKTLTCGLHKCRKVCHAGDCGDCPLGLPRACPCGKNKSIAPCSEIIDTCGDTCQKVLACGLHYCTQRCHKGDCSLCLAIVEKKCRCGLHKKEQPCTKIFTCETKCKLMRECQKHSCCKKYCDGQCPPSCYPCDLKSSVKCRCGNTSVTVPCGREKKTKTPKCVQLCRLPSKCHHENPHNCHMNECPPCGQKCGLLTSLCVHPCEAKCHDAIKIEIKTTKGTTIWDWQQETFEYKKMPHPPCAIPVMVSCIGGHEIINWPCWNSKPSSCQRECGRQLKCGNHFCTRLCHSVTDLAVQDEQDGCLPCTEECKVIQPNYSCGHRCTAICHSSTCPNPENCKKKMKIYCLCKNLKVDISCEKYRNGTKFIQCDDTCTKKKAEEDRIKLDMAAKLKQLEEEKNRLELEQFEKNLLKRNIRREKLLKLFRKIILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -