Basic Information

Insect: Empis livida
Gene Symbol: -
Assembly: GCA_963932195.1
Location: OZ010648.1:36699695-36701610[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00014 0.0087 16.6 1.2 1 23 216 238 216 238 0.95

2 11 2.7e-05 0.0016 18.9 0.3 1 23 245 267 245 267 0.97

3 11 2.3e-05 0.0014 19.1 1.2 1 23 273 295 273 295 0.97

4 11 0.0041 0.25 12.1 1.9 1 23 301 324 301 324 0.97

5 11 1.1e-05 0.00069 20.1 2.4 1 23 334 357 334 357 0.96

6 11 1.7e-05 0.001 19.5 5.6 1 23 367 389 367 389 0.98

7 11 0.0013 0.077 13.6 3.0 1 23 402 424 402 424 0.97

8 11 8.7e-06 0.00052 20.5 0.6 1 23 430 452 430 452 0.98

9 11 0.00044 0.027 15.1 1.1 1 23 461 483 461 483 0.97

10 11 0.00028 0.017 15.7 0.6 1 23 491 514 491 514 0.95

11 11 0.00034 0.021 15.4 0.6 3 23 553 573 552 573 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00014	0.0087	16.6	1.2	1	23	216	238	216	238	0.95
2	11	2.7e-05	0.0016	18.9	0.3	1	23	245	267	245	267	0.97
3	11	2.3e-05	0.0014	19.1	1.2	1	23	273	295	273	295	0.97
4	11	0.0041	0.25	12.1	1.9	1	23	301	324	301	324	0.97
5	11	1.1e-05	0.00069	20.1	2.4	1	23	334	357	334	357	0.96
6	11	1.7e-05	0.001	19.5	5.6	1	23	367	389	367	389	0.98
7	11	0.0013	0.077	13.6	3.0	1	23	402	424	402	424	0.97
8	11	8.7e-06	0.00052	20.5	0.6	1	23	430	452	430	452	0.98
9	11	0.00044	0.027	15.1	1.1	1	23	461	483	461	483	0.97
10	11	0.00028	0.017	15.7	0.6	1	23	491	514	491	514	0.95
11	11	0.00034	0.021	15.4	0.6	3	23	553	573	552	573	0.96

Sequence Information

Coding Sequence: atggCAGCGAAATTATCCCTAAAATTTGATTCAACAATTTGTCGCGTATGTTTAGAGGATGAGGGCCAGGTTTCATTATTTGACCCAAAGGACAATGCTGAAAATTTTCGTTTTATAACATTGCTTGAGgcCTATGATAATGATGGTCTTCCACAATTTCTATGCTTAAAATGTCATGTTCGTTTAAAAGTTGcccattattttaaaacacaaGCGATATCTGCAAATACCCAACTTAAATCGtatttaactgaaattaataagaaatttacaaaaattgctCGTAACTCAAAACCATATGAAgatttagaaaatgaaatagaagaatttaatcatattttgcCTGAAAATGAACgaattaaatttgacaaaGATATAGAAGAACCAATAGATGATCCACTAGATGACAATAGTTTTGAATTCTATGATGCAGATGATCcaaatcaatttgaaaataatacaacAAAGAATGTTGAATATCAAATTGTAATACAaccaaataaagaaatttcaatttcagattcttctacgcttataaaaaaatctccacaaaatattaaaaaaaaattagtgaaaaatgaaaatattaataaaactagtCCACAAGCTATTTCTGCAAATACCCAACGTAAAGTAAAtgatacatttttatgttcgATATGTCAGAATACATTTAcaactgaattaaattttaaacgtCATAtggaaattcatttaaaaaagagGGAATCATTTGATTGTAATATTTGtggtaaattatttacacaaCGTGCATCTGTTAAGCAACATTTACTTATTCACAGCGGTGAAAGACCATTTGCTTGCGATGAATGTCCTAAAACTTTCCGACGTCGTAAGACACTGGTGGGCCATAAAAAATctcataaaaaagaaaaattatttgaatgtGAACATTGTATgatgaaattttccattaaaaaatcgttgattaatcaTATAAATCGTGAACATAATGATGATGGTGATCCAACTGTTTTATATCCTTGTGAAAATTGTCATAAAAGTTATCGTTCAAAATATAGTCTAAAtgatcatattttaaatcaacatACATCAAAATCAAAACCAATTAATCCACATAAATGTACagaatgtaataaaatattttattccaaatataaattaaatagtcaTATGAAAAATCATTCATCATCCAAAATAGCAGAAACTTCATATAGTATTCATAGATGTTCACAATGTCCAGctatttttcattcaaaaagaACACTTAATTCACACATGGAAATTCAtgaaacaaatgaaaactttaaatgtaatatttgtgatgaaatttttggtaGAAAATATAAGTTATTATTACATATGCAAGAGcatgaaaaaaatactaatgaaaataatttttcatgccgaaaatgtaaaaaagaatttagtattttagaaAACCTCTACGAACATTTAAGAGCACACAAACAAACTGAtaatgaaaagtttaaatgTTTACATTGTGATGAACGATCAATATCAAAAAGTGGCCTTAAAGCTCATATAGTTAgtgaacataaaaatgaatttaaagaaTGGAATATATGTGCTTCATgtgatttaacatttttaaccTTTGATACGTATTATGATCACATTATACAAAATCATAGTCCCTGTTTTGATGGAGATTGTAGAGAATGTGGCGCTTGTTTTGAAACTCAAGAGGAATTAAATGAACACACAATGGAACATGATGTTATTAgtaataatgaataa
Protein Sequence: MAAKLSLKFDSTICRVCLEDEGQVSLFDPKDNAENFRFITLLEAYDNDGLPQFLCLKCHVRLKVAHYFKTQAISANTQLKSYLTEINKKFTKIARNSKPYEDLENEIEEFNHILPENERIKFDKDIEEPIDDPLDDNSFEFYDADDPNQFENNTTKNVEYQIVIQPNKEISISDSSTLIKKSPQNIKKKLVKNENINKTSPQAISANTQRKVNDTFLCSICQNTFTTELNFKRHMEIHLKKRESFDCNICGKLFTQRASVKQHLLIHSGERPFACDECPKTFRRRKTLVGHKKSHKKEKLFECEHCMMKFSIKKSLINHINREHNDDGDPTVLYPCENCHKSYRSKYSLNDHILNQHTSKSKPINPHKCTECNKIFYSKYKLNSHMKNHSSSKIAETSYSIHRCSQCPAIFHSKRTLNSHMEIHETNENFKCNICDEIFGRKYKLLLHMQEHEKNTNENNFSCRKCKKEFSILENLYEHLRAHKQTDNEKFKCLHCDERSISKSGLKAHIVSEHKNEFKEWNICASCDLTFLTFDTYYDHIIQNHSPCFDGDCRECGACFETQEELNEHTMEHDVISNNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -