Eliv014664.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- hang
- Assembly
- GCA_963932195.1
- Location
- OZ010648.1:44677478-44686393[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0092 0.56 10.9 0.8 3 23 251 272 250 272 0.96 2 22 0.44 27 5.6 2.3 2 22 361 381 360 381 0.93 3 22 0.96 58 4.6 0.8 3 21 391 409 390 410 0.94 4 22 0.0039 0.24 12.1 1.1 1 22 450 471 450 473 0.90 5 22 1 63 4.5 1.5 2 23 513 535 512 535 0.92 6 22 0.003 0.18 12.5 2.0 2 23 585 607 584 607 0.95 7 22 2e-05 0.0012 19.3 0.2 1 23 615 638 615 638 0.96 8 22 0.66 40 5.1 0.5 2 23 652 674 651 674 0.95 9 22 0.16 9.5 7.1 1.3 1 23 677 699 677 699 0.97 10 22 0.00082 0.05 14.2 0.7 2 23 777 798 777 798 0.97 11 22 0.0069 0.42 11.3 2.3 2 23 848 870 847 870 0.95 12 22 0.024 1.5 9.6 0.6 3 23 880 901 878 901 0.95 13 22 0.00071 0.043 14.4 0.4 1 23 915 938 915 938 0.97 14 22 0.61 37 5.2 2.5 1 21 981 1001 981 1003 0.95 15 22 0.0023 0.14 12.9 0.9 1 23 1011 1034 1011 1034 0.96 16 22 0.0026 0.16 12.7 2.6 3 23 1043 1064 1042 1064 0.93 17 22 5.2e-06 0.00031 21.2 0.2 2 23 1160 1181 1159 1181 0.97 18 22 2.2e-05 0.0013 19.2 0.1 1 23 1216 1238 1216 1238 0.97 19 22 0.00019 0.011 16.3 0.6 2 23 1269 1291 1268 1291 0.93 20 22 0.11 6.4 7.6 0.3 2 20 1311 1329 1310 1331 0.91 21 22 0.00055 0.033 14.8 0.1 3 23 1346 1366 1346 1366 0.97 22 22 0.0038 0.23 12.2 2.7 1 23 1552 1574 1552 1574 0.96
Sequence Information
- Coding Sequence
- atgggTGATGAACTAATTGTTCGGGCTCGACAAAATTGCTGTCGTTTATGCTTAGCACCAGATAGTGAATGTATTTCAATATTCAATGGTTTCGCTTCAGATAAGGAACcacttttaactaaaattaatgctTGTGTCAACATCAAGaTATCAAAAACTGATAATTTATCACAacaaatttgtcatttttgtataagttatttaaattcatggcaaagttttaaaaatcgTTGTTTAGCATCACAAAAGAAACAACAACTTTGGCTTGATAACACATTACgaaatgtacaaaaacaaattgatGATATTCGGGCATCTCGTCaaaatgatgataattttacattaccACAAACAATTTTACATCAAACTTCAACACCTTCAAATAAACGAAAACTTTTGcCATTGCAAATTAAAGAAGAACCAATTTTTGATGATGAAAGGGATGAAAGTATGAAAGTTGATTTAGATCCAAGTGATTTTTTAGCTAGAAATGATGAAGATGAAACTGAAGAATTAAAAAGACTAGcagcaaatcaaaatttaacaataacgAAAAGTGTTGGTGGTAGTAATGATGATGGTCCACCAATTTTAACATCACTTGGTTTAACAAGTGTTTTGCCGTTTAATTTCTTGAGTACTGAATTGGGGCAAGATCaatcatcaaattttaataattctactGATACAGGGGAAATATCACAAAATACAACAGGAGCAAATGATTCAAGTATAATCAAAACAGCTGCTTGTCGTGTTTGCAAATTACGTTTTTCTACACGGGCAAATGCGCGTCGACATGAACGTAATATACATGGTCGTGcattattacaaaatcaatCTATTGATGCATCATCACCATCATCGTCATTACatacaacaaattttcaacaacaagTACAAAGAATTACCATGAAACCAAACATTCCGACACATAATGCTAATGGTGAACCAATTACACCTGAAATGCTTGGTATTTATGAATATGATAAACCTGAAAAATATCGTCATTTATTTACAGAAcgtttattacaatttattgaacaacattcagaatttttacgacaatatcaaaatttaacatgTAAATGTTGTTCTAGAGAATAtccaacatataaaaattttatggcaCATATGCgtaaaaaatatccaaaattaccaagaaatttatgttttaaatgtttaacacCATTTGAAACAAAAGCACATTTTGTATCACATGTAAAACGTCgtaattgtataaattactttaaattatatttattagatgaTACAATACCAAAACGTACACCGCAAGTATTGTTAGCAGAAAAATCACGTGCTAGagaattattaacaaataaagtatatgaatgtaaaatatgtccaaaaaaatttcgtttaaaattagaatttcgTAGTCATGTATATGATGATCATTcagaaatgcaaaaaaaagatGTAATGCCTGGTCATTGTGCATTTTGCGGTTTAGAAATTGAAGATCCTGTTGAACGTAAACgtcattataataatatggaATGTATTGTGTATTTACGTTGTGGTACATGTGAAGAAAAATTTGACAgtcatacaaaatttttagatcATGTTTATTCTGAACATTTACCAAaacatttatcaaataataatgataattcaaataatagtacattaactaattttaatcaaatatccataaaatcagaattattatttggtCAACAAACACCACAAGCAGCACCAACAACATTCCATTCACGTATGCCACAAAGTTGTAAAATATGTGGGcaacattataataattataataatgtattAAGACATATGGAATCAAAACATCCAGATCAATTACCACAAACATATAAATGTTCAATGTGTAATGCTGGTTTTCCACGATTATCAAATTTACGTGAACATATGCAAGACATACATAACACAAAAATGGCTAAACCAAAACGTGATATGGGTATTTATTGTCGTATGTGTATGGAGAAATTTGATCAGCGACAAAATTGGTTAATACATCAAAATAGTGAACATAATCGTTATGTCTGTTGtgtttgtaattttcaatcaagagatactgataattttattgaacataTTGAACAACATCCTAGTTTATCAGCAAATCGTAGTGGTGGTGAGAATACAAGTGATTCTGGTAATAAATCATATTCTGGTCGTTATGATTATGTAATGAAAGATTTGTTATCTATAACTAATGGTAGTGGCGCTGGTGGTAATGAAGGTGATGATGAAAATGATGATCAAGATAGTAGAAATCCAGCAAAACGAATAAAATTAGAGACGTCATTGAATAATATAACATTACCAGCTAAAGCTGAATGTAAAATATGTCATGCTgtatttaatagtaatttaggATTATCAAATCATATGAGAGCACATAATGCACAACAAGAAGCTAAACGTGCAGCAGCAGCAGCTGCAGCAGCAGCATTGAATGGTGCTGATAATTCATTAAGTGATGATTTACTATCAAAACCATTACGTAATACACAAATATTAGCTGTTGAAAGACGTTTTCGGCGAATGCGTTGTCGTTTGTGCCAAAAACGTTTTTccacaaagaaaatttatcgtCGTCATATGTTAATTGAACATCAAATACGTAATGTTCAATTTATTCATTGTGCTGTTTGTAAAGCTGAATTTGCCCATGAGAAAGGTTTAAAAGTACATATGATTAAAGTACATGGTAAAGTACTAAAAGATATTAGTGAAATGAATTTACAATTTGAATGTGATGTTTGTTCGACGGTTTATCGTACCGAAGAACAATTAATGTCACATAAAAAATCtgttcataatttaaatgatgaaaTTGATTTCCTGGAACAATCTGGAGGAGATAATAGTTTAGGTGGTGgtcatattattaaaatagaaaaacctAATATAGTAATACCACCAAATCAATCAACAAATTATTGGTATCAATGTCGTTATTGTGCTAGTAATTttgatacaaataaaaaattggcaATTCATATTAATTGTCATGATGAATTTGATTCAAATGATTATTCATGTAAGGATTGTGGTAATGTTTATAGTGGACGTAAAAGTTTATGGGTACACCGTTATAAAAAGCATCCATTAATACCGGATCCCGCACCATGTGAAATCTGTCATAAAACATTCTTTGATCGTAATATGTTGGAGCAACATTTAATACATTcccacaaacaaaaaattgttaaaaataatagtggTAATATTAGTAGTGGTAATGTAGttgctaataaattaattgctgagcaacaacaattacaacaattacaacagcaacaactacaacagcaacaacagaaTTTGAATGATACCCAATTATTAACaactgatgatgatgacgatcatgatgatgatgaaagtGAAATTGGTGGTGGTGTAGGTAATGATGAACAACATATTATACATGTTAGTGGAGAAGATGTACAAACAGTCGCTGCCTTAGGATTACCACAAGTACCATGTTCAGTTTGtggtataaaattttctgatcaagatttatttacaaaacatatGCAAATGCATGAAATGATGTTGTATACTGATAATCCATTAGCTTCAATGTTTGATACAGAACCTGAAGATCCTGATACATTTCTAGCAAATCGTATTTCTGAAAATGGTGAATATATGTGTGATATTTGTCCAAAAACTTTTCCACAATTAACAGCTCTGAAAGTACATCGTAATTGGCATTTTAGAAGTGATGGGAAACAGattcCAGCTGATCCTAATACAGTTTGGCGTTCAACAGCtaaaaaacgtaaaaatcCAAGTGCAACATTAAAATGTCAATATTGTCAGTCATCATTTATTAGttcgaataatttaaaacgtCATATAGCTGAATTGCATCGACGTGAATTAGCTCCAAATACTGAATTACCTGATGTTGTGTTAGAAAAACCATTAGAATGTACTaaatgtaaattgaaatttaaaacaaatgctGAATGGGTTGagcataaattaaatgatgcTAAGAATGGTAAACCTTATGCACCATTTGAATGGGGTTGTGAAATATGTGGTAAAGTTGTATCTCGAAAAGAACGTTTAATTCAACATATGACAGCACATATTAAAGATAACGAACCAAATGGTTATTCCAATGCTGATAgtgaacaacaaaaaaatgatttagcTGAACGAAAACAAACAATTAGTAGTAGCGTTGATGAAGGTAGTGTTGGTGGTGgtataaaaagtgaaaatgGTTATGATGAAAGTGATTCAGATGATTCATCGTCATCGTCGTCAGATTCATCGTCAACTAGTAGCAACAGTCGTAATGAAAATGGCCAAGACAATAcgaaaaaatctacaaaagaAAATGTCAACAAAAGCGATGGTGAACAGAAAGAGGAAAAGAATATAGTAGATGaagaaaaaagtaatttaaagttAGAAAGAAAAGATAGTGAcgacgatgatgatgattatgataatgatgaaaataaaactgaaaatcagACAGCAGAAGAAGATGAAGATGAAGAACCACCTGTCGCAGATGAAGAAGgagaatttgatttaaatactGATCTATCAGATGGGGATGATGATAATGAAGCAgattttgatgatgatgaagatgacgatgatgatgaagatgatCCAAATGATTCTGGGCCACATGCATgtgatttatgtaaattatattttgatacatCGAAACAATTACGTAAACATGTTAGTACACATTTTGTAAATGGTCCAGAAGAAAGTAGTAAAGCATCCATGTCAACTGTAGCTACAGCAACTAATGCATCTACAACAAATTCCCCTTTTAAATTTgctgataaaataaaagaattaccAAAAAGTGGTGCTGTTGAAAAAACTGATATATTAGTTACTAATATTGGTGATGTTAAAGAAGAAGTTGTtgttaaaactgaagcaacaGAAGAAAAAATTCATGAAATTGATGACGATGACGATGACGACGATGATGATGTtgacgatgatgatgatgatgatgatgatgatgacgatgatgatttaattaatgatttagaAGTTGTTAAAGAAGAATTCGTTCATGATGGTTATGAGGAAATTGAAGAAGATGGTGAAGTAATTATGGTTCCTCCAAtgtaa
- Protein Sequence
- MGDELIVRARQNCCRLCLAPDSECISIFNGFASDKEPLLTKINACVNIKISKTDNLSQQICHFCISYLNSWQSFKNRCLASQKKQQLWLDNTLRNVQKQIDDIRASRQNDDNFTLPQTILHQTSTPSNKRKLLPLQIKEEPIFDDERDESMKVDLDPSDFLARNDEDETEELKRLAANQNLTITKSVGGSNDDGPPILTSLGLTSVLPFNFLSTELGQDQSSNFNNSTDTGEISQNTTGANDSSIIKTAACRVCKLRFSTRANARRHERNIHGRALLQNQSIDASSPSSSLHTTNFQQQVQRITMKPNIPTHNANGEPITPEMLGIYEYDKPEKYRHLFTERLLQFIEQHSEFLRQYQNLTCKCCSREYPTYKNFMAHMRKKYPKLPRNLCFKCLTPFETKAHFVSHVKRRNCINYFKLYLLDDTIPKRTPQVLLAEKSRARELLTNKVYECKICPKKFRLKLEFRSHVYDDHSEMQKKDVMPGHCAFCGLEIEDPVERKRHYNNMECIVYLRCGTCEEKFDSHTKFLDHVYSEHLPKHLSNNNDNSNNSTLTNFNQISIKSELLFGQQTPQAAPTTFHSRMPQSCKICGQHYNNYNNVLRHMESKHPDQLPQTYKCSMCNAGFPRLSNLREHMQDIHNTKMAKPKRDMGIYCRMCMEKFDQRQNWLIHQNSEHNRYVCCVCNFQSRDTDNFIEHIEQHPSLSANRSGGENTSDSGNKSYSGRYDYVMKDLLSITNGSGAGGNEGDDENDDQDSRNPAKRIKLETSLNNITLPAKAECKICHAVFNSNLGLSNHMRAHNAQQEAKRAAAAAAAAALNGADNSLSDDLLSKPLRNTQILAVERRFRRMRCRLCQKRFSTKKIYRRHMLIEHQIRNVQFIHCAVCKAEFAHEKGLKVHMIKVHGKVLKDISEMNLQFECDVCSTVYRTEEQLMSHKKSVHNLNDEIDFLEQSGGDNSLGGGHIIKIEKPNIVIPPNQSTNYWYQCRYCASNFDTNKKLAIHINCHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLIPDPAPCEICHKTFFDRNMLEQHLIHSHKQKIVKNNSGNISSGNVVANKLIAEQQQLQQLQQQQLQQQQQNLNDTQLLTTDDDDDHDDDESEIGGGVGNDEQHIIHVSGEDVQTVAALGLPQVPCSVCGIKFSDQDLFTKHMQMHEMMLYTDNPLASMFDTEPEDPDTFLANRISENGEYMCDICPKTFPQLTALKVHRNWHFRSDGKQIPADPNTVWRSTAKKRKNPSATLKCQYCQSSFISSNNLKRHIAELHRRELAPNTELPDVVLEKPLECTKCKLKFKTNAEWVEHKLNDAKNGKPYAPFEWGCEICGKVVSRKERLIQHMTAHIKDNEPNGYSNADSEQQKNDLAERKQTISSSVDEGSVGGGIKSENGYDESDSDDSSSSSSDSSSTSSNSRNENGQDNTKKSTKENVNKSDGEQKEEKNIVDEEKSNLKLERKDSDDDDDDYDNDENKTENQTAEEDEDEEPPVADEEGEFDLNTDLSDGDDDNEADFDDDEDDDDDEDDPNDSGPHACDLCKLYFDTSKQLRKHVSTHFVNGPEESSKASMSTVATATNASTTNSPFKFADKIKELPKSGAVEKTDILVTNIGDVKEEVVVKTEATEEKIHEIDDDDDDDDDDVDDDDDDDDDDDDDDLINDLEVVKEEFVHDGYEEIEEDGEVIMVPPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644391; iTF_01297774;
- 90% Identity
- -
- 80% Identity
- -