Eliv007162.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- Zbtb41
- Assembly
- GCA_963932195.1
- Location
- OZ010646.1:47336096-47341682[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 7.4e-05 0.0045 17.5 2.3 1 23 196 219 196 219 0.98 2 28 0.0011 0.065 13.9 1.2 2 23 241 261 240 261 0.97 3 28 0.016 0.95 10.2 1.5 1 23 268 291 268 291 0.95 4 28 0.00049 0.03 15.0 0.7 1 23 297 321 297 321 0.97 5 28 0.013 0.79 10.5 5.7 1 23 327 349 327 350 0.95 6 28 0.00047 0.028 15.0 0.4 1 20 356 375 356 376 0.95 7 28 4.4e-05 0.0027 18.2 1.1 1 23 446 469 446 469 0.98 8 28 0.83 50 4.8 0.8 3 23 499 518 498 518 0.95 9 28 0.00058 0.035 14.7 1.3 1 23 525 548 525 548 0.97 10 28 0.0004 0.024 15.2 0.4 1 23 554 578 554 578 0.97 11 28 1.3 81 4.1 6.2 1 23 584 607 584 607 0.85 12 28 0.00068 0.041 14.5 2.4 1 20 613 632 613 635 0.95 13 28 0.002 0.12 13.1 0.5 1 23 641 663 641 663 0.97 14 28 0.092 5.5 7.8 1.5 1 23 669 691 669 691 0.98 15 28 0.0015 0.088 13.5 2.9 2 23 740 762 739 762 0.91 16 28 0.068 4.1 8.2 2.4 3 23 816 835 814 835 0.96 17 28 0.00075 0.045 14.4 1.0 1 23 842 865 842 865 0.96 18 28 0.0014 0.086 13.5 0.8 1 23 871 895 871 895 0.95 19 28 0.014 0.83 10.4 5.4 1 23 901 924 901 924 0.98 20 28 0.012 0.72 10.6 0.5 2 19 931 948 930 950 0.94 21 28 0.00088 0.053 14.1 1.1 1 23 1030 1053 1030 1053 0.96 22 28 0.11 6.9 7.5 0.2 2 23 1108 1128 1107 1128 0.95 23 28 0.00046 0.028 15.0 2.2 1 23 1135 1158 1135 1158 0.97 24 28 0.00083 0.05 14.2 1.3 1 23 1164 1188 1164 1188 0.95 25 28 2.2e-05 0.0013 19.2 2.3 1 23 1194 1217 1194 1217 0.98 26 28 0.015 0.89 10.3 3.8 1 20 1223 1242 1223 1245 0.94 27 28 0.0015 0.088 13.5 0.1 1 23 1251 1273 1251 1273 0.97 28 28 0.0069 0.42 11.3 0.3 1 23 1279 1301 1279 1301 0.98
Sequence Information
- Coding Sequence
- ATGGATCCTTTTAAAGATGAAAACttagaaaaattagattttaaaacaGAATTTGATAATGAACCagatacaaaaaaagataatacagaaaatttcagttttccAAGTTTTAAATGTGGTGAAGTTTTTGTATCAAATTCAGCTAGTGGACAATTTGagttaaaatatcaTTTAAATTCAGATTTAGAACATTCAATCGATGACTTAGTTAAAGATATTGAATTTGCAACTACATCAATTATAGATAATGATTCAAATGATGAAATACCAACAACAGAAGAGCAGTTAACATGTGAAGTAAATTTGTCAAGTTTTCttgataataatgaatttgaaGACGGAAAAGTGGAGTTTGATGATAAAAACAATACTACTACTGATGAAGAAGATAACGAAAATACTGAAGCTGAAGATAATACAAATTCCGAAGATAATGACCAAAATTCTGAAACGGAAAACACTGAATCAAAAGAAACAAGATCAAAAGAAACAAGTAGTGAATCTAGTAATGACAGTAAAGattcttttataaatgaaattataccACCAAAAGtaacagaaaaaccaaaaaattatttaaaaaaatataaatgtaaatattgcaAAGCAAAATATGTAGTACAAACAAATCTGAATAGGCATATTAATCGTAAACATAGTGTACAAGTAGAACGTGATCGTAAGCTTAAATCTCCAATAAATAAACCAATTGAAAAAATCAAATGTAATGTTTGTGGGAaagaaacaacaaaatataaattaatgcaACACTTACGGTCACATGATGATAGTCGTTATACACATAAATGTGAAACTTgtggtaaattatttatatctgaACGAAGTTTGGATTTACACAATcgtaatttacatttaaaagaaCGCCCATATGCatgtaaatttgataaatgCGATCGTGCATTTGTCACAGAGCACGGTCTAAGTGCACATCAAAAAATTCATACAAATGATCGCCCATTTATGTGCCCAATTTGTCATAAAGGTTTCTTTCgcaaaacaaaattagattATCATTTTGAGACACATCATGTTAATCGACAAGTGTTTACTTGTGATGAATGTGGTAAACAATTTATGAATACAAAAACTTTAGAAAGACATAAAATTTGTAGTCATTTTGATGATAGTCCAGATGGAAACACAATGAGAAATTCCAtcgaaaataatgaaattaatattaaagagaAATTACCTAccgatttaattaattcaatcgATGATGAACAAAATGACGATGATCAATTTCAATTACCATATACTGCagttacaacaacaacaaatatccAACAAACTATTACAAATAAACGTGGTAATTATGAATGTACATAttgttcattaaaatttatttataaagcaAATTTAACTGAGCATATTATGCGAAAACATAGTTCACAAATTGATCATACCAAATTGTTAGCAGAAAAGGCTGAAATAGATAAACGTAATGCATCAAAACCCCAATCAACAGCAATTTGTGATATTTGTGGtaaagaaacattaaaaactcGTATGCGCCAACATTTAAGATCACACGATAATAGTCGTTATACACATAAATGTGATACTTgtggtaaattatttatatcagaGAAAAGTATGAATATACATATACGTAATTTGCATTTAAAAGATCGTCCATTTCCatgtaaatttgataattgtaataaaaaatttgctacTGAAAATGCATTAAATGCCCATTATCAAATTCATACATGTGAAAGACAATTTAAATGtcatatatgtaaaaaaggGTTCTTTACCCAAGCAAAACATGATTATCATGTTAAAACTTATCATATAAATGGcagaatttataaatgtgATGAATGtgataaaagattttatgaaaatggtAGTTTACAAGCACATAAAATATGTCATAGTAATGAAAAACCTTATGCATGTGATGAATGCCCAGCAAGATTTCCTCGTGAAAGAtcattacatatacataaacaaTCACATTCTggaattaaagaatatttttgtaaaatgtgtAATAAGGATTACGCATTATATAATGGAATTTATACGCACATGAAAACTCATGGCATTTCCTATTCAGCTGCAATGGAAAAAGGCCTAGCTGtTGATTGCAGTACAGAAAACTATGATGAAGATCCATTAAAACAAATCCATACTCGCAGCATTACAAacagattgaaaaaaaatgagaaattaaATACCTTACTTGAATGTCCGTATTGTgagcaaaaatttaaaaaaaaattaaatttacgaaaaCATGTTGATCATAAACATAATTCTGAGACATTTAACGTAAATGCAAAAGATATTACAAAAGCATTGGAATCTTCATCATTTtctgataatttatataatcacAATGATTCGGAaccaaaagtaaaaaaacgCAATTATATAAAGTCGAATTTAACTTCAAAGAATATTAAGATAAATTGTAAACTTTGTGGCAAAGAAACCCCTAAGCATAAATTAACTCAGCATTTACGTTCTCATGATTATAGCCGGTATACGCATAAATGTAATGACTGTGGAAAACTATTTATATCAGAAAAATCACTTGATAttcatgtaaaaaatttacatttaaaagaaaaaccctTTGCTTGCACAATTGATAATTGCAATCGAACCTTTGTTACAGATCATGCATTGACAGCACATCAAAAACTTCATTCAACAGAACGCCCATATCAATGTCCTCAttgtttaaaagaatttctacataaatcaaaattaacttATCATCTAAAAGTTTATCATGATACTGGAAGAGTTCTAACTTGTGATCAATgtgataaacaattttttgatatgTATACATTAGAAAAGCATAAAGTTTGTTATCATATTgataatattagtaatattatGCCTAAAAGTAATTTcgatgatattaaaataattgaaacaaATTCTAATGAAAATACATCAAAATTTTCGAATGATAGTTGTAATAGTACTGAAGAAATTCGTAATTTACAAAGTTTATCATGGTCTGAAACGAACTTTGAACATAGCTTTCATAGTACAAATAATGAGAGTGTACTAGATGAGCAAAGACGACGACCAGGAACTTATGAATGCATTTATTgtgaattaaaattcatttataagtCAAATTTAAAGGAGCATATTAATAGAAAACAtagtgataaaaatataaaaaattgtgacCATGTCGATACTAGTGAATTagatgaaaatgttaaaaatgttGATGATAGAAAAAATCGTAAAAAATCTAGaacgaaattttcaaataaaacatcATCAAGAATTAATCAAACAACACGAtcacaagaaaaattaatttgtgataTTTGTGGTAAAGAAacagttaaatataaaatggtaCAACATTTAAGATCACACGATAATACCCGTTATACACATAAATGTGATACTTGTGGGAAACTTTTTATATCTGATAAAAGTCTTCAAAttcatatgaaaaattaccatttaaaAGATCGTCCATTTGCTTGTACATTTAGACATTGTAATAAAACATTTGCTACTGAAAATGCTCTAACCGCACATCGTATTTTGCATACTTCTGAAAGACCATTTAAATGTTCAATTTGTCAAAAAGGTTTTGTTCGTAAATCAAAAATGGAATATCATATTAAAACTTATCACGTAAAtggaagaatttttaaatgtgaTGAATGTGGTAAgagattttatgaaattcataCGTTACAAGTTCATAAAATTTGTCATAGTAATGAGAAACCATTTGCTTGTGATGAATGCCCAGCAAGATTTCCTCGTGAAAGATCATTGGCATGGCATAAGCAATCTCATTCGGGTGTTAAACCATATATTTGTAAAGTTTGTGGTAAAGAATATGCTTTATATAATGGTATTTATTCACATATGAAAACGCAtggtattaaatattcattggCATTTGAACGAGGTGAAGTTAATACACAAGATTTGATTGATACAGCTTTAGCGACGGAGACAACAACTACATCAACTACAATGCAGAATAACCAACTGAAActgtaa
- Protein Sequence
- MDPFKDENLEKLDFKTEFDNEPDTKKDNTENFSFPSFKCGEVFVSNSASGQFELKYHLNSDLEHSIDDLVKDIEFATTSIIDNDSNDEIPTTEEQLTCEVNLSSFLDNNEFEDGKVEFDDKNNTTTDEEDNENTEAEDNTNSEDNDQNSETENTESKETRSKETSSESSNDSKDSFINEIIPPKVTEKPKNYLKKYKCKYCKAKYVVQTNLNRHINRKHSVQVERDRKLKSPINKPIEKIKCNVCGKETTKYKLMQHLRSHDDSRYTHKCETCGKLFISERSLDLHNRNLHLKERPYACKFDKCDRAFVTEHGLSAHQKIHTNDRPFMCPICHKGFFRKTKLDYHFETHHVNRQVFTCDECGKQFMNTKTLERHKICSHFDDSPDGNTMRNSIENNEINIKEKLPTDLINSIDDEQNDDDQFQLPYTAVTTTTNIQQTITNKRGNYECTYCSLKFIYKANLTEHIMRKHSSQIDHTKLLAEKAEIDKRNASKPQSTAICDICGKETLKTRMRQHLRSHDNSRYTHKCDTCGKLFISEKSMNIHIRNLHLKDRPFPCKFDNCNKKFATENALNAHYQIHTCERQFKCHICKKGFFTQAKHDYHVKTYHINGRIYKCDECDKRFYENGSLQAHKICHSNEKPYACDECPARFPRERSLHIHKQSHSGIKEYFCKMCNKDYALYNGIYTHMKTHGISYSAAMEKGLAVDCSTENYDEDPLKQIHTRSITNRLKKNEKLNTLLECPYCEQKFKKKLNLRKHVDHKHNSETFNVNAKDITKALESSSFSDNLYNHNDSEPKVKKRNYIKSNLTSKNIKINCKLCGKETPKHKLTQHLRSHDYSRYTHKCNDCGKLFISEKSLDIHVKNLHLKEKPFACTIDNCNRTFVTDHALTAHQKLHSTERPYQCPHCLKEFLHKSKLTYHLKVYHDTGRVLTCDQCDKQFFDMYTLEKHKVCYHIDNISNIMPKSNFDDIKIIETNSNENTSKFSNDSCNSTEEIRNLQSLSWSETNFEHSFHSTNNESVLDEQRRRPGTYECIYCELKFIYKSNLKEHINRKHSDKNIKNCDHVDTSELDENVKNVDDRKNRKKSRTKFSNKTSSRINQTTRSQEKLICDICGKETVKYKMVQHLRSHDNTRYTHKCDTCGKLFISDKSLQIHMKNYHLKDRPFACTFRHCNKTFATENALTAHRILHTSERPFKCSICQKGFVRKSKMEYHIKTYHVNGRIFKCDECGKRFYEIHTLQVHKICHSNEKPFACDECPARFPRERSLAWHKQSHSGVKPYICKVCGKEYALYNGIYSHMKTHGIKYSLAFERGEVNTQDLIDTALATETTTTSTTMQNNQLKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -