Eliv000848.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Empis livida
Gene Symbol
zas1
Assembly
GCA_963932195.1
Location
OZ010645.1:5487574-5494094[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0013 0.077 13.6 1.6 1 23 130 153 130 153 0.93
2 25 0.00022 0.013 16.0 3.1 1 23 158 181 158 181 0.91
3 25 0.00096 0.058 14.0 1.4 2 23 191 213 191 213 0.94
4 25 1.5 92 4.0 1.7 1 20 238 257 238 259 0.93
5 25 2.5e-05 0.0015 19.0 7.7 2 23 345 366 345 366 0.97
6 25 3.8e-05 0.0023 18.4 6.7 1 23 372 395 372 395 0.96
7 25 6.7e-05 0.0041 17.7 1.3 1 20 401 420 401 422 0.94
8 25 0.49 29 5.5 1.2 1 23 438 460 438 460 0.96
9 25 2.5e-06 0.00015 22.2 0.3 1 23 466 488 466 488 0.96
10 25 8.8e-06 0.00053 20.5 0.8 1 23 494 516 494 516 0.98
11 25 3.5e-05 0.0021 18.6 1.7 3 23 524 544 522 544 0.95
12 25 3.6e-06 0.00021 21.7 2.3 1 23 550 572 550 572 0.99
13 25 0.00019 0.012 16.2 1.0 1 23 577 600 577 600 0.97
14 25 3 1.8e+02 3.0 0.1 1 17 722 738 722 739 0.85
15 25 4.5e-06 0.00027 21.4 3.8 2 23 852 873 852 873 0.97
16 25 2.1e-05 0.0012 19.3 6.1 1 23 879 902 879 902 0.97
17 25 3.1e-05 0.0019 18.7 3.5 2 23 972 994 972 994 0.96
18 25 0.00084 0.051 14.2 5.7 1 23 1000 1023 1000 1023 0.97
19 25 2.1e-05 0.0013 19.2 1.4 1 19 1029 1047 1029 1050 0.95
20 25 0.037 2.2 9.0 3.6 1 23 1066 1088 1066 1088 0.96
21 25 2.4e-06 0.00014 22.2 0.2 1 23 1121 1143 1121 1143 0.96
22 25 1.4e-05 0.00084 19.8 2.2 1 23 1149 1171 1149 1171 0.98
23 25 7.5e-06 0.00045 20.7 0.2 1 23 1177 1199 1177 1199 0.97
24 25 1.2e-05 0.00072 20.0 2.2 1 23 1205 1227 1205 1227 0.99
25 25 1.5e-05 0.00088 19.8 0.8 1 23 1232 1255 1232 1255 0.97

Sequence Information

Coding Sequence
atggAATATATTCCTACTTTATCCGAAGATCATCCTAATTGGGCTGATGTAGATATTGAAACAGTATGTAGAATATGTCTACAACCCGAAAATGAtcttcttttaatatttgatgaattaaatttttataataatattccatTAGCTCGAATGATTACAGAATGTTCAAATTGCAcgGTTGAAAGACATGATGATTATCCACATCAAATATGTCTCAAATGTGTTgaagtgttaaaaatttcttataattttagattaaaatgtaaaaaagcacataaaattgctaaattagttttaaataatggGCAAGAACTTAGAATTCCAATTATAGATATTGATAATTTACCACCACTTGATAAATTTACCCAAACAGAAGCTATATCTTTTTTCCCATGCGAAAAATgtgatgaaaaatttacaacaatcGAGAAATTGagaaCTCATAGATATTATAATCATAAGGGAACTTGTCATGAATGTAGAGTTTGTAATAAATCATTTCGTAGGATTAGCTACCTTAAAAATCATTTGGCTTTTTATCATCCTGAATTAGGATATACCAATACTAATGAATGTggtatttgttttaaaaaatttggccGTACAGAACATTTACGAAGACATCTAATTAATGTGCACAATcacaactttaaaaataaaacaacagaGCTGACTCCAGAAAATTGTTTAAGCGatgattcaattaaaaaatatatttgtaaattgtgCTCAACAAATTGTGGAACAGAAAATGATCTTGTGAGACATTCTTGCATTGAAAATGTTGATGTgcCTGTTAAGAATGGGGAAACAAAAAGCCCCGATTACGAAGAAAATCATTCTGAAAATGATGCTttggatttatttaaatctgatGATCAATCCGAGGATGAAGATTTAAAACCACTTTcagcaataaaaaaagaaatcgaATACATGAAACAAGATGATTTAAATAACACGATAGAAGAACCAgcacaacaaaaagaaaaaatgaaaacaggacaagctaaaaaaaataaaacagaacCTTATTGTGAAATTTGCCACAAAAGTTTCACACGTGCTCATCATTTACGTCGGCATGAACGTAGTCACCTCAATATAAAACCATATAATTGTGTTCattgtaataaaaactttacacGTTCAGATCATTTGAATAATCATATGACGAAATTTCATTCGGAACAACAACCTTTTAAGTGTGCAAAATGCAATAAAGGTTTTATACGAAAGGAACATTTGGAAAAGCATGAAAACCAATGTACGAATGATCAACAAGTtccaaaagtaaaaaaaccaaaatcctatatatgtgaaatttgtaaaaaagtgCATAAAACTAAAGCAGAATCTGTAGAACATTTAAAAACGCACGACAACCAGAAACCGTATCTTTGTTCAGAATGTGGGTTGCGTTTTGTTCgtaatgattatttaattattcatatgCGACGACATAATGGAGAGAAAccatataaatgtaaattttgtgataaagGGTTTCCACGAGCTACAGATTTAACAGTTCATGAAAGATATCATACTGGTGAAAAGTCTCATTTATGTGTTACATGTGGTAAAGGTTTTCACCGTGCTTATAATTTGGTTGTACATATGAGAGTTCATACTGGCGAAAGACCTTacaaATGTTCACATTGTTCAAAAAGTTTTGCACAAGGTAATGATTTAAAAGCTCATATACGTCGGCATACTGGTGAACGTTTTCGTTGTGAAATTTGTGATGAAGGTTTCATACAAGGATATCATTtaacacaacataaaaagtCTGCTCATGGTATTGATCAACCATCTCATATACGACGTTTAGAAAAAGTTACAGCTAATCgaatagaaaagaaaaaacaagttaaagAATTAATGAATCAAATAGTTGAACCTGAAGAAATTAAAGATGAATTATCAAATGAAAATACGAATGATGAAAAGgTTGAAAGACATGATGACTATCCATATCAAATATGTAAGAAATGTATTGAactgttaaaaatttgttataattttagactaaaatgtaaaaaagcACATACAATTgctaaaatagttttaaaaaatgcgCAAGAATTTAGAATTCCAATTATGGATATTGATAATTTACCACCAGTTGACAAATTTACCCAAACAGAAGGTATCTCTATTTTTCCATGCGAAAAAtgtgatgaaaaattaaaaacaatcgAGAAATTAAGAGTAAATGATGattcaatcaaaaaatttatctgcaAATTGTGCTCAACTTGTGAAACAGAAAATGATCTTGAAAAGCATCCTTGTATTGAAATTGATGTgtcGCTTAAGAATGGGGAAATAAAAAGTCCTGAAAATGGAGAGAATCATTCTGAAAATGATGCTTTCGATTTATTTACATCTGATGATCAATTCGAGATTGAGAATTTTAAACCactttcaacaaaaattaaagaaattgaataCGTGAAGCAAGATGATTTAAATTACATGATAGAAAAGCcagtaaaagaaaaacaaaaactcaaaACTGGACGAccgaaaaaaactaaatcaaaACCCTATTgcaaaatttgccaaaaaatgtttacacgAGCTCATGATTTACGTCGACATGAACGTACTCACCTTAATATAAAACCATATAATTGTGTTCActgtaataaaaactttacacGATCAGATCATTTGAATATTCATTTGAGAAAATTTCATTCGGAACACCATCCTCTAAAAgatgattcaataaaaaaatatatgtgctCTACAAATTGTGAAACAGAAAATGACCTTAAGAAACATTCTTGCATTAAAAATGATGTgcctatgaaaaatgaagaaatacaaaacattGATACAATTGCGGAACCagtaacagaaaaaattaatactggacgaccaaaaaaaatgaaaacaaaaccttattgtaaaatttgccaaaaaacaTTTACTCGTGGTTACCATTTACGTCGACATGAACGTAGTATTCACCTCAATGAAAAACCATATAGTTGTGttcattgtaataaaaaagttacaCGACCAcatcatttaattattcatatgACGAGATATCATTCGGAACTACAACTTTTTAAATGTACAAAATGCAATAAAGGTTTTGTACGAAAGGAACATTTGGAAAAGCATGAAATCCAATGCACAAATGACCCAAAACTTCCAAAAGTAAAGAAACCAAAATGttatatttgtgaaatttgtaaaaaaggTTTTACAACAGAACGACATCATAGAGTTCATGTAAACAATCATAgttcaaaaacattttcatgtaaattttgtaaaatagtgCATAAAACTAAAGCAGAATCTGTAGAACATTTAAAAACGCACGACAACGAGAAACCATATCTTTGTTCAGAATGTGGATTACGATTTCCTCGTAATAGttctttaattatacatatacgCCGACATAATGGGGAGAAAccatataaatgtaaattttgtgataaagGGTTTCCGAGAGCTCACGATTTAACAGTTCATGAAAGATATCATACTGGTGAAAAATCTCATATATGTGTTATATGTGGTAAAGGTTTTCAGCGTGCTTATAGTTTGGTTGTACATATGAGAGTTCATACTGGAGAAAAACCTTacaaatgtTCACATTGTTCAATAAGTTTTACACAAGGTAATGATTTAAAAGCTCATATACGTCGTCATACTGGTGAACGTTTTCGTTGTGAAATATGTGATGAAGGTTTCATACAACGATATCaattaaaacaacataaaaaatctgCTCATGATATTCATGAACAGTCTTTTACTGGACGTTTAGAAAAAATCACAGTTAATcgaataaaaaagaaaaacacagATTAA
Protein Sequence
MEYIPTLSEDHPNWADVDIETVCRICLQPENDLLLIFDELNFYNNIPLARMITECSNCTVERHDDYPHQICLKCVEVLKISYNFRLKCKKAHKIAKLVLNNGQELRIPIIDIDNLPPLDKFTQTEAISFFPCEKCDEKFTTIEKLRTHRYYNHKGTCHECRVCNKSFRRISYLKNHLAFYHPELGYTNTNECGICFKKFGRTEHLRRHLINVHNHNFKNKTTELTPENCLSDDSIKKYICKLCSTNCGTENDLVRHSCIENVDVPVKNGETKSPDYEENHSENDALDLFKSDDQSEDEDLKPLSAIKKEIEYMKQDDLNNTIEEPAQQKEKMKTGQAKKNKTEPYCEICHKSFTRAHHLRRHERSHLNIKPYNCVHCNKNFTRSDHLNNHMTKFHSEQQPFKCAKCNKGFIRKEHLEKHENQCTNDQQVPKVKKPKSYICEICKKVHKTKAESVEHLKTHDNQKPYLCSECGLRFVRNDYLIIHMRRHNGEKPYKCKFCDKGFPRATDLTVHERYHTGEKSHLCVTCGKGFHRAYNLVVHMRVHTGERPYKCSHCSKSFAQGNDLKAHIRRHTGERFRCEICDEGFIQGYHLTQHKKSAHGIDQPSHIRRLEKVTANRIEKKKQVKELMNQIVEPEEIKDELSNENTNDEKVERHDDYPYQICKKCIELLKICYNFRLKCKKAHTIAKIVLKNAQEFRIPIMDIDNLPPVDKFTQTEGISIFPCEKCDEKLKTIEKLRVNDDSIKKFICKLCSTCETENDLEKHPCIEIDVSLKNGEIKSPENGENHSENDAFDLFTSDDQFEIENFKPLSTKIKEIEYVKQDDLNYMIEKPVKEKQKLKTGRPKKTKSKPYCKICQKMFTRAHDLRRHERTHLNIKPYNCVHCNKNFTRSDHLNIHLRKFHSEHHPLKDDSIKKYMCSTNCETENDLKKHSCIKNDVPMKNEEIQNIDTIAEPVTEKINTGRPKKMKTKPYCKICQKTFTRGYHLRRHERSIHLNEKPYSCVHCNKKVTRPHHLIIHMTRYHSELQLFKCTKCNKGFVRKEHLEKHEIQCTNDPKLPKVKKPKCYICEICKKGFTTERHHRVHVNNHSSKTFSCKFCKIVHKTKAESVEHLKTHDNEKPYLCSECGLRFPRNSSLIIHIRRHNGEKPYKCKFCDKGFPRAHDLTVHERYHTGEKSHICVICGKGFQRAYSLVVHMRVHTGEKPYKCSHCSISFTQGNDLKAHIRRHTGERFRCEICDEGFIQRYQLKQHKKSAHDIHEQSFTGRLEKITVNRIKKKNTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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