Eliv001319.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- -
- Assembly
- GCA_963932195.1
- Location
- OZ010645.1:14033570-14035090[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.01 4.5 7.5 0.4 14 38 49 70 43 75 0.80 2 9 0.028 12 6.2 2.0 12 38 177 200 171 204 0.78 3 9 0.0011 0.46 10.7 2.1 3 30 197 226 195 234 0.80 4 9 0.0029 1.2 9.3 3.3 14 40 237 260 231 274 0.88 5 9 0.0046 2 8.7 3.2 5 29 285 309 276 319 0.87 6 9 0.029 13 6.1 0.7 14 41 322 346 315 349 0.76 7 9 0.66 2.8e+02 1.8 1.4 18 28 354 364 347 377 0.79 8 9 0.52 2.2e+02 2.1 0.2 12 29 377 394 366 405 0.77 9 9 0.0017 0.74 10.0 0.2 18 41 411 431 399 432 0.82
Sequence Information
- Coding Sequence
- atggataatttgttgaaaattgaagaaaatagtgttttcattaaaaatgaacCAAATGAAGGTAGTGTGAGTTTTATCAATGATGGAAAAATTACGAATAGTGATAAAGTTTGTTGtggtgaaatttttgtaataaattcagAAAACTATTGGATTATATGTCGaatatgtaatttgaaatttacttcAACATCTGCTTTTATTGATCATAcgattaaattacatattgaaAAATCCTCATCATGTggtgaaattgaaattaatgcaAATATTAATCGACAATTAAAAAGCGAAATCGAagattgtaataattttgcaaatgAAGAACATAATAATGATGACGACGTAGAAAATCCTGAACATCTTTAtgttaacgaaaaaacaatTCCTCAAGATGGAATTATTGATGACGGAGATGAAGATTTTAAATCATATGATGAAGCTAACGAAAATTATGAATCCCTTGATACTAAATCATATTCTGATGAAGCTAATGAAAATAGTAATGGAACTGATATAAAAAGAACAATACGACTTAAGAAGAATCAATGTGATATATGTAAAAAAGTGTTTGACAGACcgtgtaaattaaaaagacATATGGGCGTCCACGAGAAACAGATGAAAGACAAATCATGGCAATGTACTTTCTGTGgagatatttttacaaaaaaaaatttatatcgaaATCATAGAGAAACATATCATAAGGAACGTGTAAAATGTGAATATTGTGACAAAacttttggtaataaaaataatttaaaggaacatattaatatgcATAAAAATGAGCGTCCATTTCAATGTGATAAATGTCCaatgaattattattctaaaGCCTCGTTAACTTGTCATATTCGAAGAGTTCATTTAAAAGATACACCACACACTTGTCCACATTGTGGTAAAAAATTCTTACGAAGCTGTGCTTTAACAATTCATATTCGGATACATACaggAGAAAAACCATATGTTTGTGAATTATGTGGTGCAAATTATCAAACTTCATCACTTTTAGcaaatcatataaaaagaCATAATAATGATAGACGATATTCTTGTGAAATATGtggaaagaaattttttaataatacatatttaagaGATCATAAAATATCAGTTCATACACAAGAAAAACCATTTGGTTGTGATGTATGTGAAGCAAAATTTAGTGGAAAACCAGCATTGCGtaaacataaaaaattacattcagcagtaaaagaatatatatgtaatatttgtgGAAAAGCATATGCTCAAAGTCCTGGTTTATATGCTCATATGAAATCACATCAAATAGCATCCGAAAAGGCattaatacaataa
- Protein Sequence
- MDNLLKIEENSVFIKNEPNEGSVSFINDGKITNSDKVCCGEIFVINSENYWIICRICNLKFTSTSAFIDHTIKLHIEKSSSCGEIEINANINRQLKSEIEDCNNFANEEHNNDDDVENPEHLYVNEKTIPQDGIIDDGDEDFKSYDEANENYESLDTKSYSDEANENSNGTDIKRTIRLKKNQCDICKKVFDRPCKLKRHMGVHEKQMKDKSWQCTFCGDIFTKKNLYRNHRETYHKERVKCEYCDKTFGNKNNLKEHINMHKNERPFQCDKCPMNYYSKASLTCHIRRVHLKDTPHTCPHCGKKFLRSCALTIHIRIHTGEKPYVCELCGANYQTSSLLANHIKRHNNDRRYSCEICGKKFFNNTYLRDHKISVHTQEKPFGCDVCEAKFSGKPALRKHKKLHSAVKEYICNICGKAYAQSPGLYAHMKSHQIASEKALIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643456;
- 90% Identity
- iTF_00643456;
- 80% Identity
- iTF_00643456;