Eliv007631.2
Basic Information
- Insect
- Empis livida
- Gene Symbol
- -
- Assembly
- GCA_963932195.1
- Location
- OZ010646.1:55038665-55040222[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.6 7e+02 0.5 0.5 17 27 7 17 4 24 0.79 2 9 0.017 7.3 6.9 0.8 15 39 221 247 216 252 0.75 3 9 0.0071 3 8.1 1.8 14 27 250 263 241 274 0.85 4 9 1.5e-05 0.0065 16.6 0.9 12 43 279 307 271 308 0.88 5 9 0.0075 3.2 8.0 1.0 3 24 299 320 297 323 0.92 6 9 0.039 17 5.7 1.4 8 41 333 362 326 364 0.82 7 9 0.1 43 4.4 0.3 17 40 367 387 361 390 0.85 8 9 0.00052 0.22 11.7 2.4 13 39 391 414 385 418 0.83 9 9 0.0018 0.77 10.0 0.5 18 44 424 447 421 447 0.94
Sequence Information
- Coding Sequence
- atgttactTAGTTGCAAGAATTGGTGTAGATTATGTGGAAATGATACAGAAATGggaattaatatatttattaaaacagaatatttcttaaatattgcCGATGCTATTCAAAAATTACTATTGATTAATATTACCAACAATGATGATATTCCAACTGAAATATGTGATAAATGTAACACAATTTTGactacattaataaatttttatatccgtTGTCAAAAAACACAAGAAATGTAtgcagaaattttatttaattttaatttacaaaataaaattgatttaaatgattttcgtattaattacaaattaatgaataaagaagaattaattcaaatatctCTTGAAAATGAAACTGAAACAgctattgataataaaaatgaagaaaatgaagagaaaacattagaaaatcataaaactcatgaattgaaaaagaaaaatacattttctaaacacaaaacaaaatgCTCTTTAAAggctaataatattaaaaatcaattaaatagtATCACTATAAAGGAAAGTATTAAtacaataacaaataataataatactaataaacagagtaatattttcaaacaaaatgtatataataattcaactgaaagtatttataatattaatagtgaaaaacaaattgaaatatcaTCTTCATCATCGCCTACAATAATCTATTGTGAAATATgtgaaaaaatgtttacaagcAATCGCGGTTACggaattcatttaaaaattaaacatttaattaatcgTAAACCAATTGAATGTAAATATTGTGGTAAAACATTTAAACTTGCCgccttattaaaaaaacatgaaaattcaCATTTACCAActgataaaaagaaattttatccATGTAATAaatgtgataaaaaatttagttctgATAGTGGCTTATGGTCACATATCCATACAGTGCATGAAAAAAATCGTTCTGTTATATGTGAGGAATGTGGTAAAGGATTTCCAACACcatcatatttaaaatcacataaattaagtcataaaaaggaaaatgattttcaatGTCCTAAATGTCCAATGAAAttgaaacgaaaaaaaacattaatgatacatTTACAAACACACGgagaaaatttcatatgtCCAATTTGTGGTATgcaattaaatacaaaaaaaaccttacGTGATCATATGGTTGTCCATtcagatgaaaaaaaatttaaatgtaatatatgtgataaaagttttaaacgtgaaaaaactttaaacaGTCATTTAATACTTCACACTGGAATAAAACCATACGAAtgtgaattttgtaaaaaacgTTTTTCTCATGGTTCAAATTTTCGAACACATCAAAAAAATGCACATCCTTTGGAATTAGCTGACAGAGAGGCAAAAGGtgaaaaaagaatttgtaaaGAATATCCAAAAgccaaattattaaaagaatttaataaaaatatatag
- Protein Sequence
- MLLSCKNWCRLCGNDTEMGINIFIKTEYFLNIADAIQKLLLINITNNDDIPTEICDKCNTILTTLINFYIRCQKTQEMYAEILFNFNLQNKIDLNDFRINYKLMNKEELIQISLENETETAIDNKNEENEEKTLENHKTHELKKKNTFSKHKTKCSLKANNIKNQLNSITIKESINTITNNNNTNKQSNIFKQNVYNNSTESIYNINSEKQIEISSSSSPTIIYCEICEKMFTSNRGYGIHLKIKHLINRKPIECKYCGKTFKLAALLKKHENSHLPTDKKKFYPCNKCDKKFSSDSGLWSHIHTVHEKNRSVICEECGKGFPTPSYLKSHKLSHKKENDFQCPKCPMKLKRKKTLMIHLQTHGENFICPICGMQLNTKKTLRDHMVVHSDEKKFKCNICDKSFKREKTLNSHLILHTGIKPYECEFCKKRFSHGSNFRTHQKNAHPLELADREAKGEKRICKEYPKAKLLKEFNKNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643466;
- 90% Identity
- iTF_00643466;
- 80% Identity
- iTF_00643466;