Eliv011655.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- ttk_1
- Assembly
- GCA_963932195.1
- Location
- OZ010647.1:53209623-53214793[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-18 4.6e-15 55.2 0.0 2 45 597 641 596 641 0.96
Sequence Information
- Coding Sequence
- atgtcggTGCAACAATTTTGTTTGCGTTGGAATAATCACCAGCCTAACTTTATTTCTGTTTGTTCTTCATTACTACATAATGGAACTTTAGTAGATGTAACTTTAGCTGCAGAAGGAAGACAACTTCAAgcacataaaattgttttatctgCTTGTAGCTCATATTTTCAgacATTATTTACAACAAATCCATGTCAACATCctattgtaatattaaaagatgtccaatataatgatttaaaaacaatggttgattttatgtattatggGGAAGTAAATGTATCACAAGAACAATTAccacatattttaaaaacagctgaaatgttaaaaatcaAAGGTTTAGCTGAAATGCCAGCTGATGCTGCAACATTAACAAAATCTGATAGTAAATCATCATCTGATCAAACAGAGCAATTACAAGGTAGTGGTAGTGGTTCAGATTCAATATGGGGTAGTACAGAATCACAATTTGGTCAACAGCAACAACCCCAACTCCAACAAccacaacagcaacaacaacagcaacagatacaacatcatcatcatcatggCGGTGGCCATCAGCAACAACAAAGTCAATCccaacaacatcatcatcatcatcatcaattaAGAAGAACTCCATCCCCTGGTACGGGAACTTCACCTGCAGCTAGAAGGAAACGTATACGAAAATCATCAAATAATggATCTACAGAAAGAACTGTAGAAGATCATAGTACTATCGAAACGtccacaaatataaatttgtcacAAATGAATCAAATGTCATTTGGTGGCAGTGTAAATGCAGCAATTCATTCAAATATTGGTAAGGATCCATCAAGTGGGGGTGGTGATACTGAACATCCGCATGAATCATCACAAGAAAGTATAGATGATAATCATCAGCATCATATTCAACATATAaaacCTGAAACTGATTTAAGTGTACAACAGTCAGTACCACTAGATATATCTGGTACAACTACACCGTCAGATCATGATGCGCCATCTGTTAGCTGTTCCCAATCTCAGACATCTCATTCagGTGTGCAATGGACTGTTGTTGATTCAAATTATCCACGATTTTCGCTGTCTTCATGTCAATCTAGTATATCACTTGGTGGTGGCAACAGTGGTACCGGTAATAATGCTGGCGATAGTCAAcctaatgataataataatggcCCTGGCAATACAAgtaatcaacaacaacagcaaggACAAACAAATAATTCTGGTAATACAGTTGTAACAAcgaatcaacaacaacaacagcagcaacaacagcaacagcaacaacaaggTCACATTCAAATGCATTATCAAAATTCAGTATATCCATCACAGTTAATATCAGTAAACAGTTTAGTTGGTAGTTATTCACAGAATTTATCAACACCAACATCACCGAATGAATCAGCTATGGTCCAATCAGTTTATAGTCAAGGTCCTACCCCAACTCAATCACCAGTACATCAAATTGGTAATAATGtaggtggtggtggtggtggtgggggtggtaatactaataataataataatacatcaAATCGAAATAATACATCTGGTAATGGAGGTGGGAATAGTGGctcacaacaacaacaacagcagccacaacagcagcaacaacagcaacacaATTCTGCAACATCTAACCAAAATCAATCTGTTGCCAGCAGTAGTAGTGGTAGTGGAGGAATTGTAGCTAGTGggggtggtggtggtggtagtaGTGACGCTAGTGGGAGTGGTGGTCAAACACCAGCATCAACAAAACGAAAACGTTCAGTAAATCCGCAAGGTGATGAGAATTTTAAACGAGCCCTTGAAGCTGTGCGCACTGGTGGTATTGGATTTTGTAAGGCTGCTCGTTTATATGGTGTTAATAATCGTACATTATggttagaatataaaaaacgtGGTTATCCAATTAGTCGACCTAGTATAAAAAATCGTATTAAATTAGAGCCAAATATGtcaccaccaccaccatcaACGCCAACAAATGATGATGCTAGCATGGAAAATTATgaacataatattaatcattCAGCAATAAATATGCAAGTATCAGATACGCCAACACCAATTATGTGTACACCGCATACACATCCAATGGGTGTTATGAACTTTTTAGATTCTAGAGCTATGGATTTTGCAACAACAACTGGTATCCATACAACAATACCACGACAACGGTATACAGATGGTGGTAGTGTTAATGTAAACCCAGGATCAATGAATTTACAAGGACTAAATTTCAATTCTAtgtaa
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPADAATLTKSDSKSSSDQTEQLQGSGSGSDSIWGSTESQFGQQQQPQLQQPQQQQQQQQIQHHHHHGGGHQQQQSQSQQHHHHHHQLRRTPSPGTGTSPAARRKRIRKSSNNGSTERTVEDHSTIETSTNINLSQMNQMSFGGSVNAAIHSNIGKDPSSGGGDTEHPHESSQESIDDNHQHHIQHIKPETDLSVQQSVPLDISGTTTPSDHDAPSVSCSQSQTSHSGVQWTVVDSNYPRFSLSSCQSSISLGGGNSGTGNNAGDSQPNDNNNGPGNTSNQQQQQGQTNNSGNTVVTTNQQQQQQQQQQQQQQGHIQMHYQNSVYPSQLISVNSLVGSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQIGNNVGGGGGGGGGNTNNNNNTSNRNNTSGNGGGNSGSQQQQQQPQQQQQQQHNSATSNQNQSVASSSSGSGGIVASGGGGGGSSDASGSGGQTPASTKRKRSVNPQGDENFKRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNMSPPPPSTPTNDDASMENYEHNINHSAINMQVSDTPTPIMCTPHTHPMGVMNFLDSRAMDFATTTGIHTTIPRQRYTDGGSVNVNPGSMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644012;
- 90% Identity
- iTF_00644012;
- 80% Identity
- iTF_00643316;