Eliv011652.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- Zbtb8a
- Assembly
- GCA_963932195.1
- Location
- OZ010647.1:53201049-53202600[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-13 5.3e-10 39.0 0.0 4 43 296 335 294 337 0.92 2 3 0.026 43 4.1 0.0 28 38 367 377 345 381 0.79 3 3 6.6e-19 1.1e-15 57.2 0.0 4 40 405 441 405 442 0.96
Sequence Information
- Coding Sequence
- atgaatcattTGAAATGGTTAGGACACAGCTCCACTTTATTGGATATGCAAAAAAGCCTGCAAAACGGTAGCGAACTTTGTGATGTAAAACTTGTTAGTGGCAATGGAAAAGTTATGTATGCACACAAGGCAATTTTATTCTCATCAAGTGACTTCTTTagaacaattttcaaaaattccgCGGACACATCAGAAATATGCACAATATTAATACCAGATGTAAAAGGCACTATTCTCACTAATATATTGGACTTCATATATACGGGTTCGATCAGTTTACCATCAAATAATTTGTCAGAATTCCTCGAGAACATCAATATTTTAGGGATAAAAAGTGCCATAAGTTTTGATTGCCATGTTGTATCAacaaataaagataaaatatctaaaccTGAAGATAGTATTCTTTTTGAACATGCAGTGATCCAAGAAgataatgatgaaaatatggaaagagATAATATTATCGAGGtagaagaagaagaagaaattGATACTATAGATTCATCAGTTGATACAGATCAAAAGAGTATTCAATATTTGGAagtatttaatgataataaactTGGGCAATATGCAATTCAAAACAGTACGATTGATGAAAATGGCGACTATGAAAATTCAGATAATACATTTACTCTAACTGAAAATGCAGATAATACATTTACTTTAActgaacaaaaaatacaatcaAACGAACCTGCTAAAGCAGTAGAATCGCAATCTGATATATCTAATATACCGACAACGGCGATAGCTACTCTGAAACCAATCACCAGTAAATCAAAATTCGGAAAATTAAAGATGAAAATAGATACTACAGATGTTCTTTATGAGAGTCCAATACCTTATGAAAAGCCCAGTACTTCTCAAGACCGTGCTCAAGCATTTGAAGGAGCTGTTAAAGCTGTTATTGATGAGGGCATCAGTTTACAAAAAGCTGctgaaaaatatcatatatcgAAAACTGTTTTATGGCGACGAGTTAAGAAACATCCTTCATACAATAAAACTTATCGAGAAAATCCAGTTATTGAAgcagcaataaaaaaattggaaaatggtgAATCATTAAAAAGCATAAGTCAAGCATTACAAATACCAATGTCAACTTTACACAGACATAAGATGCGATTAGCTGAAGAGGGAAGATTACCGGaacatatacaaattaaaagaagAGACTTAGAATCCAAggagtatttaaaaataaaattagctaAGGCTGTTGAAGCATGTATGAATGGTGGTATGTCGCAAAATCACGCTGCTGTAGTTTACGAGGTTCCAAAATCAACGCTTTGGAGACATTTACAAAGAAAATCACTTTGCGAAAAATCTGCTATTGCCGTTAAGAATGAAATTACAGCAAGTACTGAtgaaaaaattctgaataCAGAAGCCTCAGAAGATATTGCAATTACAccattttccaattaa
- Protein Sequence
- MNHLKWLGHSSTLLDMQKSLQNGSELCDVKLVSGNGKVMYAHKAILFSSSDFFRTIFKNSADTSEICTILIPDVKGTILTNILDFIYTGSISLPSNNLSEFLENINILGIKSAISFDCHVVSTNKDKISKPEDSILFEHAVIQEDNDENMERDNIIEVEEEEEIDTIDSSVDTDQKSIQYLEVFNDNKLGQYAIQNSTIDENGDYENSDNTFTLTENADNTFTLTEQKIQSNEPAKAVESQSDISNIPTTAIATLKPITSKSKFGKLKMKIDTTDVLYESPIPYEKPSTSQDRAQAFEGAVKAVIDEGISLQKAAEKYHISKTVLWRRVKKHPSYNKTYRENPVIEAAIKKLENGESLKSISQALQIPMSTLHRHKMRLAEEGRLPEHIQIKRRDLESKEYLKIKLAKAVEACMNGGMSQNHAAVVYEVPKSTLWRHLQRKSLCEKSAIAVKNEITASTDEKILNTEASEDIAITPFSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643340;
- 90% Identity
- iTF_00643340;
- 80% Identity
- iTF_00643340;