Basic Information

Gene Symbol
GATA6
Assembly
GCA_015832385.1
Location
JACTOM010000874.1:2464913-2478359[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-17 9.9e-14 51.3 2.4 1 35 428 461 428 462 0.98

Sequence Information

Coding Sequence
ATGAGCGAGCACCTTATTGGTTGTgaCATACTAAATGTTACGGCGGACAAATTAGAGGAAATAATAAAGCCACTGAACGATTGCGATTACGACGATGCGAGCAAACAAAAGTACGCCGAAATCGGCTCACCGGACTCCACTGAGGAAATGAAGAACCTGGAGAGTCGGCAAGCGGCGGTGACACTGCTTCAGATAAAAAATTACGATCCGACCAAGTACGTTGTGAAGGCGGAGGAAAGCCCTCACATTATGTTTAATAGCGTACCGAGTTTACCGCCTTCCGACAGAGCGAGAGAGGTTATGCATTGCAATGCCGTCATCGACATTATAAGCAAGGCTGTGGCGGTCGCGCAACGAGAAAACGAAGAATCTCAGAACTTCTCCCCGAATTATACAAGTGTCATTGACAGGGCGCATGTTGCCGGAGTCAACGAGGTTATAACATACACACAAGAGTATCCCGAGGAACATTATAGCGCGTACGTAGCGCCACAGAGTGCGACCAGCCCCGGGAGCAACGATGACCATGACAATAAAGAGATGGATCTCTCATTATATGGTTCCGTCAAGAGCGAATCCATTGAACAGAGCGAGCAAGTGGAACGTGATACTACAGGGGTATTTTTACATAGAACGCTAACAAGTAATAAGTCTTCAAGTTTTGTGGACGAATATAAACAGCATGTTTTTGGTCGAACCGGCAATAAATCAAAACCAGTAAAAGAAACCCCACCAATATATGAAGATTGCAGCCAGAGCAGTAGTGGATCAGATCCAGACAGGTTACAGATGGACATTTCCGAAGTGTCGCAGGACGACCCAGAAGAGACACAGTCAGTACCATCGGCTCAATCATCACCGAAGCCGCCTCACGATACCGAGAACGAAAAGGATTGTCTATGGCAGGCGCTTCATAAACAAAACGGGAGGAATGGAGGTGAGGCGACACAACTTCTACGGCGGTTAATTAACAGCAAGCATCTCGGCATGACGGTGTCGCCGCTAAGAACAACCACGTCGCCACTTCCCGCCCCTTTACCTCCTCCAAATGGAGCTGTCTCACCGaATGGCGAGTGGTCGAATTCAGGTCGTGGAGGAGCTGCAGGGAATGCGGGCACGGCACGTAGGAAACAAAGCTGTCCAGCCCGTGCACAGTTGGTGCACGAGTCACCCAACGTTTGGCCTGTATCGCAGGATAACGAAGGGGCTGAAGGAGGCGGGTCGGTTGGCGGAGGGGGTGGGGCTTGTGGTGCTCGAGGAGTTCAGCGCGTGGAGCTATCGTGTAGCAACTGTGGCACGCCTACTACTACCATCTGGCGGCGGGACGCCCGCGGCGAGATGGTGTGCAACGCGTGTGGACTTTACTACAAGCTGCATGGTGTACCGCGCCCCACGGCTATGCGCCGCGATACCATACATACTCGCCGCCGCCGCCCCAGGCACGACGGCAAACACTCGCGGAACAAATCTCGTCGTAGTGGCAGCGGGGGTAGGTCAGAGAGTGTCGGTGGTACCACCGGTGGCACTGCGGCGGTCAATGAGGCAGAAGCGAGTGCTCGCAGTGCAGCGGCTGCAGCCCCCAGTGGAGAAGGCGCTGAAGAAGCTGTGCTAGCAGCTCTGCGGAGGCAATTGCAACCCCATCTTCTAGCTGCGTTACATGCACACTCGCCCCGACCACACTCACATATGCATCGTACGCAGgtcggAAGAAGCATGCCGGAATACGACGAGGCACCTTTGAACCTCGTATCGAGCCACGTTGCTGCAGAAGAGACGCATTGA
Protein Sequence
MSEHLIGCDILNVTADKLEEIIKPLNDCDYDDASKQKYAEIGSPDSTEEMKNLESRQAAVTLLQIKNYDPTKYVVKAEESPHIMFNSVPSLPPSDRAREVMHCNAVIDIISKAVAVAQRENEESQNFSPNYTSVIDRAHVAGVNEVITYTQEYPEEHYSAYVAPQSATSPGSNDDHDNKEMDLSLYGSVKSESIEQSEQVERDTTGVFLHRTLTSNKSSSFVDEYKQHVFGRTGNKSKPVKETPPIYEDCSQSSSGSDPDRLQMDISEVSQDDPEETQSVPSAQSSPKPPHDTENEKDCLWQALHKQNGRNGGEATQLLRRLINSKHLGMTVSPLRTTTSPLPAPLPPPNGAVSPNGEWSNSGRGGAAGNAGTARRKQSCPARAQLVHESPNVWPVSQDNEGAEGGGSVGGGGGACGARGVQRVELSCSNCGTPTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDGKHSRNKSRRSGSGGRSESVGGTTGGTAAVNEAEASARSAAAAAPSGEGAEEAVLAALRRQLQPHLLAALHAHSPRPHSHMHRTQVGRSMPEYDEAPLNLVSSHVAAEETH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01018250;
90% Identity
-
80% Identity
-