Basic Information

Gene Symbol
pnr
Assembly
GCA_015832385.1
Location
JACTOM010000891.1:1766105-1777121[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-16 7.9e-13 48.4 2.4 1 35 463 496 463 497 0.97
2 2 9.2e-18 2.9e-14 53.0 7.5 1 35 524 557 524 558 0.97

Sequence Information

Coding Sequence
ATGGAGAGTGTTATGATCCCAAGACCTGACGAACAACATGAAGGAGAAAACGATGAAGCCTTACAATTAGTTAAAAATGAAGACCGTGCTGATTTAATAAATGATGGAAAAGCAGACGCAACAGAGGGAGCCTCTGCTTTAGTGACGGTGTCAGGGGTAGACACCGGAGCTGAACAACACTCTGTTATAACTTCTCGCAGAGCCCTCAGAACAATTACTACAGCAGGTCACATAACCGATGCCACAGATATAAATGACGATGGTGTAAAAGACGAGCCACCTGAACCGCCTCCTTTAGAACACGATCAGTTACAGTACTCGACAAAATTAGAGGATGCGGAGGGCCGGGCCATTGTTGCACATTACGACGAGGAGAGATTGCGATTAACTGAAGCGGAAACGGCGCGATATTTATCGTTTAAATCAGAACCTTACCGGAGCTTACAGTCACCAACACCTATGCCACAGGACAAGAGGTCACAAGTTCAATATGCACGTGGTCTACCGCCGAGGACGACATATGGCCGAGGGCTGTCATTACGATATGGAACCCCTCATCACGTCATAGTAGCACAAGAAGGAGAGCCAGATGATCATTCTCATGAAGCGTTCCTACAGAAAGATAAAGCTGATCAACTTCAGCAGGCTTACGCAACTAGTGAAGCTGCAACTGCTCATGACAACAGACAATATGCTGCTGTACTTGGAGAACATGTCACTGCTTCTTCGGCTTTAGAAATGATTCAAACGACATCTTTAAGCAATCAACAAGCTGTCGGAGTTGCGTATCAGCAGGTGAAGTACGAGTCACGTGGCGAGGGCGAGCCACGACCGACAACGTACGCTAGCTTGCAACCCGTGACATCGGTTCACGGTGGCGGGTATGCGTATGCGGGGCAAAGTCCACAGTACGCTGGTGCTGGTTATGGGACATATGGTGGAAAGGAGCTGCTGACCCTGTACGGAACTGGTGGACCCAGTACCACAGGTAGTGCGGGCGGTGCAACCCGTGGAGACGAGTCACCCCCCGGCCAACTTCTATACCGTAGCGACCCAACACTATCATCATCGTCCTTAGGAGCGCGTGGCGCTCATGTCGTGTACGGTTCAGTAGTGCCTCAGTCCCAGGCGGTGTATGAGACACCACCCAGTCCCAATTCCCAGCAGGTGACGCTGTACACGCATGGAAACACAGTGCAATACAAAGTTGGCGGCGAACACTATCTCGGGCAAGGCGGAGGTGTTGAATACGTGCCTGTGTCAGGCTACGAAGGTGGATTATTAGTTGAAAGCTATACACCTGCGCAGCCATGGCCAACACACAACTTGCTGCCCATAGATGACAGCTTCGATCCCAACATGGCAGGTATAGGCGAGGTGAAGGAGTGTGTCAACTGTGCGGCGGCTGCAACGCCTCTGTGGCGTCGTGACGGCACCGGCCATTACCTCTGCAACGCCTGTGGCCTCTACACAAGGATTAACGGAGTAAATCGACCGCCTCTTAAGGGACAGAAAGCAAAACCACAGCAAACACTCCCGACGAATGGTAACCGCCGTGTGGGAGTGACTTGTGCCAACTGCCGTACCTCCAACACCACGCTCTGGCGCCGCAACAACAATGGCGAACCTGTGTGTAATGCTTGTGGACTCTACTACAAATTGCACAATGTAAATCGTCCCCTGAGTATGAAAAAGGATGGCATTCAGACGCGCAAGCGAAAGCCGAAGAGCATGGGCGGCGGGGGCGGCGGCGCGGGCGGCGCTCGTCCCGGCGGCGCGCTGTCTGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGGCGCGGGGGGTGCGGGGGCCGCGGGAGGGGCGCCGCTGCTGCTGTTGCCGGCCGCGCGCCTGCCCGCCGAGCCCGCTCCGCGTGAGTACTGCACACTGACCGACACCTCGCTTCGGCATCCACTTCTATCGCCTACGCCTTCTCCTAATCTACTTCACTGCCAATTTATCttcaacacttatgtaattaTGCTTAAACCTCCTTACCCTAAGAGGAGACGTCGAAATTACGGTCTACTGACTCTTTActcttttactttataa
Protein Sequence
MESVMIPRPDEQHEGENDEALQLVKNEDRADLINDGKADATEGASALVTVSGVDTGAEQHSVITSRRALRTITTAGHITDATDINDDGVKDEPPEPPPLEHDQLQYSTKLEDAEGRAIVAHYDEERLRLTEAETARYLSFKSEPYRSLQSPTPMPQDKRSQVQYARGLPPRTTYGRGLSLRYGTPHHVIVAQEGEPDDHSHEAFLQKDKADQLQQAYATSEAATAHDNRQYAAVLGEHVTASSALEMIQTTSLSNQQAVGVAYQQVKYESRGEGEPRPTTYASLQPVTSVHGGGYAYAGQSPQYAGAGYGTYGGKELLTLYGTGGPSTTGSAGGATRGDESPPGQLLYRSDPTLSSSSLGARGAHVVYGSVVPQSQAVYETPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVESYTPAQPWPTHNLLPIDDSFDPNMAGIGEVKECVNCAAAATPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQTLPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGGGGAGGARPGGALSVEAHSHKVLPPLYAAVEGAGGAGAAGGAPLLLLPAARLPAEPAPREYCTLTDTSLRHPLLSPTPSPNLLHCQFIFNTYVIMLKPPYPKRRRRNYGLLTLYSFTL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-