Ehyp022338.1
Basic Information
- Insect
- Elymnias hypermnestra
- Gene Symbol
- -
- Assembly
- GCA_015832385.1
- Location
- JACTOM010000927.1:6947689-6955090[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.7 3e+02 2.9 1.0 1 23 54 77 54 77 0.94 2 19 0.11 8.9 7.7 2.9 1 23 84 107 84 107 0.97 3 19 5.6 4.5e+02 2.3 3.2 1 23 180 202 180 202 0.96 4 19 0.0019 0.15 13.2 1.0 2 23 208 229 207 229 0.97 5 19 0.38 30 6.0 5.3 2 22 498 518 497 518 0.95 6 19 0.35 28 6.1 0.3 2 23 768 789 767 789 0.96 7 19 0.53 43 5.5 0.2 2 23 870 891 869 891 0.96 8 19 0.23 19 6.6 1.4 1 23 899 921 899 921 0.95 9 19 0.17 14 7.1 3.2 1 23 956 978 956 978 0.95 10 19 7.6e-05 0.0061 17.6 4.2 1 23 986 1008 986 1008 0.99 11 19 0.25 20 6.5 4.1 1 23 1093 1115 1093 1115 0.99 12 19 1.5 1.2e+02 4.1 2.2 1 19 1171 1189 1171 1193 0.91 13 19 0.46 37 5.7 0.2 2 23 1200 1221 1199 1221 0.97 14 19 0.012 0.94 10.7 0.8 1 23 1289 1311 1289 1311 0.95 15 19 0.014 1.2 10.4 1.1 1 23 1317 1339 1317 1339 0.96 16 19 0.0073 0.59 11.4 2.6 1 23 1428 1450 1428 1450 0.97 17 19 0.00018 0.015 16.4 1.4 1 23 1456 1478 1456 1478 0.99 18 19 2.1 1.7e+02 3.6 1.4 1 23 1571 1593 1571 1593 0.94 19 19 0.0026 0.21 12.8 3.7 1 23 1604 1626 1604 1626 0.98
Sequence Information
- Coding Sequence
- ATGCTACAACAAATGTCCTCGCCGCAGAGCGCGCAACTCGGCGAGGTCGCGGCTCTCGTGCGCCCCCTCGAAGGCCGCCTGTGCGGCGACGCATCCTCGGAGGCCTCCTCCGATGCTGCGGAAGATTTTGAATTGCCGCAGTGCAAGATAAAGAGAAACTACAACTGTACGAAGTGCACGTTCTACACGCAGAACCCGCGCGCTTATCTCGTACACACGCGCGACGTTCACTTCGAAAGACTTAAGATTTACGATTGTCCGCACTGTATTTACGCTTCCCGGCatcagcagaagctcacgagacATGTGAAGATGGTCCACGAGGCGTCGTCCGCTAAGGAAGCTGCGACGTTACCGCCCGCTGTTGAAATTTTTGAACCGGTAGAGAGAATGGAGGAATTGCTCGAGGAGGTCGAGGAGAGCGACGACGTATCGATGGACATCGACGACTGCAACGAAGAGTCACTCGAGCGCACGTTCGAATCGGAGTCCGCGATCGACCCCTCGCTGGAACAGACgggagaaaaaaataattttttcccTTGCAGCAAATGCAACTACGTAACCCATATAAGAGCGAGATATACAAAACATGTGAAGTATCATTCCATGCCAATGATTAAATGCACTATGTGTGATTTTCGCACCCCATACAAGTGGAATTTGGATCGACATATGAAAAATCACGGCGGCAATGGAAGTTTTCATTGCTCCATGTGCAATTTTACGGCAGATATAAGACAGAGTTTGACGGTGCACGAAATGAATCATCACACGCCCCCCGTGGGCCAAACGGGCATCAACAGACGTCGCAATCGTGTAGGCGCTAGCGACCTGCCCGTCGGTGCCGGCCCTATGGACTCAAACGCgcttattttaaaagaagaggAAGGAAGCGCGGATTCGCAATCTTCGCACTCTGCATCGGAAATGGGTCTACAATATATGGACAAAGACGCAATAGGCTGCAATAGTGACTCCAATGAAGCCTCCACATCAGATATTGTAAAATCTGAGACTACACAAATAACAAGGGATGCCGAAAATGATGAAACGTTATCATCAAAAGAAGCTAAGAGCTATAAACAAAGTAAAAAAGTTCCACGTCCTATTCCGCAACTTATCCCCTTGAACGCTTCAACCCCTAACCAAAAAAATCCTGGCGAACCACCAGCGAAGAAATTCAAAGAATCACCAACATCACAAACCAATGACAATCAAAAGATGGAAAATTTGACCATTGACATAACATTGACACCCGTAAATAATTTAGTGACTAAAGATACGTCGATTCGTAAAAAGAATGAATCCTTTTTCGATCGATTAAAAGAAAGATTACTAACTGAAACTGGCGGAGAAGGTACTCTCGTATGCAAAAATTGTGGGTTTGAAAGTAAATGTTTATCAGAGCATTCAGTTcatgaaaaaaattgtacaacgctAACAAATCGAATTCCAGCGAATGCACTTCACTCTAGTCTGGGATCGACACGGTGTCAACATTGCAGGCATCGATGTAAATCGAGCGCTGATTTATATCTCCATATGCAGACGTGTAGAAAAAAGGACAACTTAACTGAAAATACATTAGAAAATCACAACAATGATAGTACTGGTACTGTAACAAGTACACAGGAAAAAGATGTAGAGCCACATCCAATggaaaatgttgtttttgtttGGAACAACATAAGTCATAGCAGCAATAAGTTTGAAACTccattagatataaatattaatgacgATTCCACGTTACCAGAACAAATAAGAGGTTTTGAGTTAGACGTGGTAGACGACAATGAAACGATGAATTTATCGCCAAGCCAAGCGATGGGTAAAAAGGTTTTCAAGTGTCCACATTGTTTATTTTGGGCTGCCACTGCTTCAAGATTCCACGTCCATATAGTTGGTCATCTAAACAAAAAGCCATTTGAGTGTTCCTTGTGTAAATACAAGTCAAATTGGCGCTgggatataacaaaacatattaAGTTAAAATCTGCTCGAGATCCAGAACATGCAGACGCAAAGGTTCTAATGACAGATGAGACAGGAAGACGAAACTAcagtaaatacaataaatttttagCAATGCCAATCATGAATGAAAATGGTGAAAATGAATTTCATTACATTGACCAAAATGCAGCTGCTGATACAGCACTAGAAGAAGAATCATTCAACGATGTAGGCGAGAGTAACAATGTCTCTACGGAATTGCAACCGCTTAATCTACATTCACAATCGAATGACATAGATAGTAGATTACAAGATTTGAAAAAACCAAGGAAGACGATGTGGAagtgtaaaaaatgtaattataaagACGTTTCGAAAGAAGCATTAATCGAACATGTGCGAGAACATTCTAAACCCGATACTGAGGTTTCAGAAGAGATTAAAACTTCAAATAACCCGAATAAAAAACCTGATAATATGCCTGATCCTGCGGATCTAGCTTATCGATGTGGACACTGCAATCAACTGTCGAATTGGAAACATGTTATACAGAGACATTGCCGGTTGAAACACGACGGTGTTATCAAGGTTATAACAACTGTGAAGCCAAGAATAGAAATGCCAGTAGTAAATGAATATACCAGTGATATGTGTACAAAGTGTCCATTTAAGGCCAGCGATAAAAATGTGCTCCTGGCACACCTACAGCAACACCAACCCTCCGCACAGTCAATATTCAAGTGCTATTTTTGTCCTTTCTTTGTTAAGGATGAGCACGAATTAATACAACACCTCGTTCTACATGGTATATCGGATCCAGAAGATTACATCGCTAAAGCAATGGGATGCAAATCTCCTCTGCCAGAACAAGCTGGAAATATCTTAAATGCCTGCATAACGAAACGACATAGATGCACAGAATGCCCGTATGAAACCAATAGTAAATCTCAATATATGTACCATGAACAGTTCCATCGTCTGCCGGCAGACACTCCATACAAGTGTCCAGAATGTAATTATAGTGTGTCTAAAAGACACTTACTTCATCAACATATGCGAGTTCACGGGATTCTTGCTAAAAAGAGTGATTTAGAGGCAGAATTGGAAGCAATCTCCTCAAATTCTAATCAAACTGATGCGAAATCCGAATGTTCCGTTAATCTGGATGAAATACCTTTCGTTTGGGTATCGGCGAAAAATGAATTCCATAAAATGTACAAATGTCGTTATTGTTCTTATGTTAATTCCCAAAAATGCAAAATACCTAACCATGAAAAGATTCATTGCATTATATTTGAGAATAGTGACATTACAATCTATAAATGCTTAGAATGTAAATTCACCTGTGACAATAAGGCACGATTATCAGAACATTCAAAAACTCACGGCGAAATATACGGTCGTATTTATTGTCCCGTAGAAATGGATGTGCCCGATGAAGAACAGATAGCAAAGTTACGCAAAGTAATTGATAGGGAGAAGCTAAACGCATTTGACGAATTACCAAAAGAAGAGGAACATCATATGgaaaacaaagaaacaaaaactttgtacTATTGTCACAAATGCCCAGCAAGATTTTTCGCTGACAGTGAACTGAAAATCCATGACAAGTTTCATGATCTAACATTTTCAAACAAATGCAAAAGTTGCGAGTTTTCGGTTCCTCAAGATAACGACTTGAATGCACATATTTTCGTACACACAGACGAATACAACACTAAAACAAAAATGCTAAAGTTTATTCATAAAAGTGATTCGGTACATAAAGAACCGAAATTGCAACTAGTACACTGTTCTTTAACTTCGGAGATTACATGGATAGTCGCAAACCCAGGTAAAAACTTCAATACTAGTGAAACTAATAGTAAAAAGAACACCGACGGCAAACATACGCCAAAACAATACTTTTGTAAAGAATGTCCGGCAAAATTCTTTAAAACCTCTGCTCTAAATTATCATATGGGATTACATGGAGGAGATGGGGATCACAAATGCAAGAAATGTAGCTATGCAGTAAAAAATGTTGGAAATCTAGCAAAACATGAACTTCTGCATGAGCACGAGACAAAAGCGTCGTGTGATTATGAATCGGGTGAAGACAtggattataaaaatattccctTGTCAGGTACAGACTTATTTCAGAGAAAGACAGAGGCTCAAAAACGAGTGCTTACAGATAAGGATAAACTTGTTAAGCCAAACGATCATTTTCCACCCGTGTTGCAAGCGGATCCGCAGTTTGGATATTTAATGCATGGAAATCCAGAATTTATTTACCCTACATACCTGAAAAACGGACGTCAAAAAGAAAAACGTTATAAATGCCACAAGTGCCCCTCAGCATTCGAGAAACGGGAACAATACAAGATACATCTGTCACTCCATGGTTCAAAACAAAGATATAAGTGCGAACTGTGTGATTATTCTGTAAAATATTACGCTAATTACGTTCAGCATATGAGAAAACATCAAATGAACGACGAAGCGCAAGCAGAGAGGAAAAAGGGAATTAATGGATACACGGGATTGGAATCTGAAAATTTAGACGTTAAACCCGACGATAGCGGTGATAATATTAAACTAGCGATAAAAACTATGCCAAAAAGACCTGTGAAAAGTGACTTCCTTCAATTTTCCATCAGCGATCAACAGACGCTACGCTTATTACAACGTAGACGTTCAATAAATACTTCTGGTAAGGATACGAGCGCAACTGACGTATCACCGACGAAGGATCGTAAGCAACACATGTGTTTACTCTGCCCCTACATAAATCAGCGTCAAGATGCTCTGAGCAATCATTACAGGCGACACGATGACACTGACgtagtcaatggtggcagtcatAAATGTAACTATTGCGACTTAGTTGTAATACAATCTCATTTCCTGCGAGAACACCTGAAGAcacattttaattatcaaaagcTACATACACCCGAATGTTTTGTCGCTAACGAAAATGTAAGTTTCACGATAACTAGATTGGATGAGAGTGATTATTCAGATGATCTCAAATTAGATTTCGAGAATAAAAGCGAGTTAtcgaataagaaaaaaatttttgtaaaaataaaaacgggtgaattatttgtggattaG
- Protein Sequence
- MLQQMSSPQSAQLGEVAALVRPLEGRLCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDVHFERLKIYDCPHCIYASRHQQKLTRHVKMVHEASSAKEAATLPPAVEIFEPVERMEELLEEVEESDDVSMDIDDCNEESLERTFESESAIDPSLEQTGEKNNFFPCSKCNYVTHIRARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFHCSMCNFTADIRQSLTVHEMNHHTPPVGQTGINRRRNRVGASDLPVGAGPMDSNALILKEEEGSADSQSSHSASEMGLQYMDKDAIGCNSDSNEASTSDIVKSETTQITRDAENDETLSSKEAKSYKQSKKVPRPIPQLIPLNASTPNQKNPGEPPAKKFKESPTSQTNDNQKMENLTIDITLTPVNNLVTKDTSIRKKNESFFDRLKERLLTETGGEGTLVCKNCGFESKCLSEHSVHEKNCTTLTNRIPANALHSSLGSTRCQHCRHRCKSSADLYLHMQTCRKKDNLTENTLENHNNDSTGTVTSTQEKDVEPHPMENVVFVWNNISHSSNKFETPLDININDDSTLPEQIRGFELDVVDDNETMNLSPSQAMGKKVFKCPHCLFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHADAKVLMTDETGRRNYSKYNKFLAMPIMNENGENEFHYIDQNAAADTALEEESFNDVGESNNVSTELQPLNLHSQSNDIDSRLQDLKKPRKTMWKCKKCNYKDVSKEALIEHVREHSKPDTEVSEEIKTSNNPNKKPDNMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPRIEMPVVNEYTSDMCTKCPFKASDKNVLLAHLQQHQPSAQSIFKCYFCPFFVKDEHELIQHLVLHGISDPEDYIAKAMGCKSPLPEQAGNILNACITKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHMRVHGILAKKSDLEAELEAISSNSNQTDAKSECSVNLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIIFENSDITIYKCLECKFTCDNKARLSEHSKTHGEIYGRIYCPVEMDVPDEEQIAKLRKVIDREKLNAFDELPKEEEHHMENKETKTLYYCHKCPARFFADSELKIHDKFHDLTFSNKCKSCEFSVPQDNDLNAHIFVHTDEYNTKTKMLKFIHKSDSVHKEPKLQLVHCSLTSEITWIVANPGKNFNTSETNSKKNTDGKHTPKQYFCKECPAKFFKTSALNYHMGLHGGDGDHKCKKCSYAVKNVGNLAKHELLHEHETKASCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGINGYTGLESENLDVKPDDSGDNIKLAIKTMPKRPVKSDFLQFSISDQQTLRLLQRRRSINTSGKDTSATDVSPTKDRKQHMCLLCPYINQRQDALSNHYRRHDDTDVVNGGSHKCNYCDLVVIQSHFLREHLKTHFNYQKLHTPECFVANENVSFTITRLDESDYSDDLKLDFENKSELSNKKKIFVKIKTGELFVD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -