Basic Information

Insect: Elymnias hypermnestra
Gene Symbol: BCL11A
Assembly: GCA_015832385.1
Location: JACTOM010000067.1:519954-521837[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 4.2e-05 0.0034 18.4 4.2 1 23 258 280 258 280 0.98

2 5 1.3e-06 0.0001 23.2 1.8 1 23 286 308 286 308 0.99

3 5 6.9e-07 5.5e-05 24.0 3.2 2 23 524 545 523 545 0.97

4 5 9e-06 0.00073 20.5 3.3 1 23 551 573 551 573 0.99

5 5 5.8e-05 0.0047 18.0 0.4 1 22 581 602 581 602 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	4.2e-05	0.0034	18.4	4.2	1	23	258	280	258	280	0.98
2	5	1.3e-06	0.0001	23.2	1.8	1	23	286	308	286	308	0.99
3	5	6.9e-07	5.5e-05	24.0	3.2	2	23	524	545	523	545	0.97
4	5	9e-06	0.00073	20.5	3.3	1	23	551	573	551	573	0.99
5	5	5.8e-05	0.0047	18.0	0.4	1	22	581	602	581	602	0.97

Sequence Information

Coding Sequence: ATGCCCCAACAGTTACCGAATAAGCAAAATCATTCATCATCCAGCACTTCTTCGTCCAGTTCGGGGTGCTCTTCCTCTGGTGCTCCTCTTCCACCACCTTCATTACGTCATCACCCGTTGTTACCGCCACCAGATATGCACTCACCTTTTGGCGTCGGGGGTCTACTACGGATGCCACTGCCCGGAAGCTTACCTCCACTAGCTCACCCGTCGGTACCCCCTACCCCTTTGTTTGCACGGCCAAACCATCATGATCATAGATTTCGGATGGAACAGCTAGTTTCAGAACAATTTCGCCACCATGGTCTGAATTTAGCAGCAGCTGCCGCTGCAGTGGCAGCAAATTCCTTGCCACCACACCAAGCCTTTCCTTCTCCAGCGGATAGGCCGCCTGTAGTTCCAACATCTCTCACAGGTCGAGAAAGACAACCCCCCGTATCTCAACCTCTTTCACTTGAACCCCAGCTGGATTTTTACTCGCAGCGCTTGCGGCAACTGGCCGGTACGACCAGTCCAGGGGCGGCCACAGGCAATTCGAGCTCTCCTAGCCCCAGGAAGCATTCGCCGCCGTTCGCTTCCCCGTCGCCCTCCCGAGTCGGCCAGACTCCACCGGCGGGCGCCGGACCCGGAACGGTGGACACCCCCCGAGAGGCCACTAAACCTCATAGTGCGATATCACCTGAACGACGAATCGAGCCACAGACTGCCGATGCACCACCTCCCGAAAGACCTTCGTCAACACCGCCTACGAAGCGAAACGACGAAGCTATTCACACCTGTGAATTTTGTGGGAAGAAATTCCGATTCGAAAATAGTCTAATGGTTCATCGACGCACTCACACAGGTGAAAAACCGTTTAAATGTAATGAATGTGATGAAGCATTTGATAAGAATTCCAAATTAAAAAAGCACTTAAAAAGTCACCGTGATGGTAACACAGAAGAAGGTGAATCTGGCGGCGATACCGGCGAAGACGATTCAGAAGACGACTTGGAAGATGAGGAATTAGATGGTGAAGAAGAGGAAGAAAATGAAGACGGAGAGGATGTTGAAGAAGCTGAAGATTTAACAGTTTCAAATAGTAGTGCTCCGTCAGCTCCACCTCGTAAGCTACCTTCAGCACTACCAGCACATCCACCTTCTGCTTCAGTAGTTGGTGAATTAATGGATAAATTCGGTTTGTCTAACATTGCTCAATATAGCGAAGCTTTTAAGCAAGCACTTCAGGAATCGGGGAACTCACTAAAATGGCAGTTAGCAAAAGATCGAGACAATAATAACGGTCCTCCTTCCGACAAGCCCAATGGTATGCCTCCTACGGCAGCTCTGCGGTTAAAAGAGGAATTTGCTAAAATGCCGCCTCAGCCACATCCTTTATTTAATCCTTTTGAAAATCCGTTCGAAGCTTCGAAACGAATGAAATTAGATATGGAAAGAAATGAAGGTTGGTGGCTTCCTACTTTGCATGCGCAGCGTCCAcctgaaaatatatttgatggaCTTAAAGGCAGCGGGAATGGCTTGCTGCAAAATCCTCTTTTAAAATCGAAAGAGGGACGTCGGAACGACACCTGCGAGTTTTGTGGAAAGGTATTCAAAAATTGTTCAAATCTGACAGTCCATCGTCGATCGCATACTGGTGAAAAACCGTACAAATGCGAACTATGTTCTTACGCATGTGCACAGAGTTCTAAACTGACGAGGCATATGAAAACTCACGGAAGACTCGGCAAAGATGTATACCGCTGCAGATTCTGTGAGATGCCTTTTTCAGTACCATCAACACTCGAGAAGCATATGCGTAAGTGTGTTGTGAATCAAAGTAATGGTGCTCCCCTTGCTTTGTCCGATGACTCCAACGCGTGTCGTGACGAGGCATCGTGA
Protein Sequence: MPQQLPNKQNHSSSSTSSSSSGCSSSGAPLPPPSLRHHPLLPPPDMHSPFGVGGLLRMPLPGSLPPLAHPSVPPTPLFARPNHHDHRFRMEQLVSEQFRHHGLNLAAAAAAVAANSLPPHQAFPSPADRPPVVPTSLTGRERQPPVSQPLSLEPQLDFYSQRLRQLAGTTSPGAATGNSSSPSPRKHSPPFASPSPSRVGQTPPAGAGPGTVDTPREATKPHSAISPERRIEPQTADAPPPERPSSTPPTKRNDEAIHTCEFCGKKFRFENSLMVHRRTHTGEKPFKCNECDEAFDKNSKLKKHLKSHRDGNTEEGESGGDTGEDDSEDDLEDEELDGEEEEENEDGEDVEEAEDLTVSNSSAPSAPPRKLPSALPAHPPSASVVGELMDKFGLSNIAQYSEAFKQALQESGNSLKWQLAKDRDNNNGPPSDKPNGMPPTAALRLKEEFAKMPPQPHPLFNPFENPFEASKRMKLDMERNEGWWLPTLHAQRPPENIFDGLKGSGNGLLQNPLLKSKEGRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQSNGAPLALSDDSNACRDEAS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01080208;
90% Identity: iTF_01080208;
80% Identity: -