Basic Information

Insect: Elymnias hypermnestra
Gene Symbol: zfh1
Assembly: GCA_015832385.1
Location: JACTOM010000160.1:932992-936500[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.016 1.3 10.3 0.2 1 23 104 126 104 126 0.94

2 8 3.4e-06 0.00027 21.9 0.8 1 23 137 159 137 159 0.98

3 8 4.5e-06 0.00036 21.5 6.0 1 23 168 190 168 190 0.99

4 8 0.00014 0.011 16.8 1.0 1 21 196 216 196 217 0.95

5 8 2.3 1.9e+02 3.5 0.7 1 15 482 496 482 503 0.84

6 8 7.4e-06 0.0006 20.8 1.0 1 23 803 825 803 825 0.95

7 8 3.6e-05 0.0029 18.6 7.6 1 23 831 853 831 853 0.98

8 8 0.049 3.9 8.8 7.0 1 21 859 879 859 880 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.016	1.3	10.3	0.2	1	23	104	126	104	126	0.94
2	8	3.4e-06	0.00027	21.9	0.8	1	23	137	159	137	159	0.98
3	8	4.5e-06	0.00036	21.5	6.0	1	23	168	190	168	190	0.99
4	8	0.00014	0.011	16.8	1.0	1	21	196	216	196	217	0.95
5	8	2.3	1.9e+02	3.5	0.7	1	15	482	496	482	503	0.84
6	8	7.4e-06	0.0006	20.8	1.0	1	23	803	825	803	825	0.95
7	8	3.6e-05	0.0029	18.6	7.6	1	23	831	853	831	853	0.98
8	8	0.049	3.9	8.8	7.0	1	21	859	879	859	880	0.96

Sequence Information

Coding Sequence: ATGAACGGCTTCAAAAAGACATTGCGCGGCATGACGGAAATGACCGGTGGCCAATTGGAACTGTTGTCGCGTTTCGTGGCTGCGAGGCGTCCGCCAATCGTTCGCGGCGGGAACGTCGCTCCTGCCGACTCTGCGGCTGAGACGGTCACAAGTCCTATTTGTCGCGCCGGGCCTGGAATCGAGGCTCGTGCGAAGTCCGTAACGGAGCGTGTGTTTGCAGTCCGGCCGCTCGCCGGAGGAGGCGCCGAGAGCAAGCCGCCCGAGGAGGAGGAGGAGCGCTCGGGCTCCCCGCTCGGCCCCGGCGGCCCCTTCGCCTGCGGCTACTGCCGCGGCTCCTACCCCTCGCGCGAGCAGCTCGAGCGCCACGAGACCCTGCACACGCCCAGCACTCAGGTGGATAACATCAAATATTCCTGCAAAATATGTCCCAAGAGCTTCGAGAACGTATACCGCCTGCAGCGGCATATGATCAGTCACATCGACTGCGCGTCGATACGTAAATACAAGTGCAACGACTGCGAAAAGGCATTCAAATTTAAACACCATCTCAAGGAACATCTCAGGATACACAGCGGCGAAAAACCCTTCGAGTGCGCCAACTGTGGAAAGAAGTTTTCTCATTCCGGCTCCTACTCCTCTCATATGACATCGAAGAAATGCCTCGTCATGAATCTCAAAATGGGAAGAATAAAGCCGAACAATCCCGCTCTCAATCCAGACCGAAACTCTTCTCGTAAGCGCACGAACGCTTTGGTCGCCTCTCAGCTAAACAACAACATAACTGCAAGTAACAATTCCTTTTTACCTATATTACCGAAATATAACGAGGCGGCGGCTGCGTTCTTCGCTTCAATATCGCCGCAAGAAAACAGTTATCACCGCCCTCCCTTAGGACAACCGGCGATGAACCCCTTTTATATGCCTCCCGGCATGCCTATGAGTCCCGCGAGCGGTATCGCCCCGTACTCGTTTCCAGCTTCGTTGAGCCAGCTCTTTGAACAGTTAGCTTCGCAACAGTATCAACAGAGTAAAATGGAAAGTCAAAGTCCGAACAAGTTTAACCCATCTGGTGCGAATCCCGAGGATTTGATAGAAGAAATAACGGAAGAAGACGACAAGAGGTCCGAAGGCAGCGCCGAATTGGTTATGGATATAGAAGATGAAGATAATATTTCTATCAAGAAAGAGCAACAAGACAGAGATACAGAAACCTTTGCCAGATCTCACGCCTTCGACACGGTTCCAGAGAATACTATCAACGGTGAAGTTGAAAACGAGCATTCCGGCTTCGATACTATTTTAAAATCTGTGAATGCTTCTGTGGCGAAGCACTTTTTTAGACCTAATATGGAAAATTTATCTCCAGTGTCCGGGAAAGTCTGTCCTACTGTCGAGTCTCCACCGGCTCCTCATTTGACTATCAAAGAAGAACCTGACGACTCTCACCGTTGCTTAAAGTGTAATATAATCTTTAACGATAAAAATGAGTGTTACGAACATGAAAAGTTATGTGGAAACATGTTTAGAAAGCATGAAGGACTGGCGGCTCAAATGGCCGAAACGGTAGCGCTTAACAGATTAGAGGCTGAAATGCGAGCCTCGATACAGAGCGGAGTGAGCGCAAGTGAAGATGAAGATTTTGGAAAAGATGATAACGAAGATAAAGCGTCTTTGCATGAAAGTGACAGAAAGATTAGAGTACGCACGGCACTGACCGAAGAACAGCAAGCAGTGCTGAAAGGACACTACGCTTTAAATCCGCGACCAAATCGAGAGGAATTCAAAAAGATCGCACATCAGATAGGCCTCGATAACAGGGTCGTTCAAGTTTGGTTCCAAAATAATCGAGCAAGAGTACGGAGGATGACCCAAGTGGTCGTTATGACGGACCAGCCTTTGGATCTGTCAACAAAAAAGTCGAGCGCCTCCGTCACCTCCAGCCCGGCACCGTCGCCCAGCTGCAGCATTTCAGTTACACATTCCGATTCCGAAGAAGCTGTAAATCTAAGTCAAAAGTCTTCACGCAGTACGACCCCACACCGCTcgcaatatttaaatacatacccACATTCCAATTGCTCTTCTTCTTCCTACATGGACTTTCGATTGTCGCCATCGCCGGGTGAAAATATAAATGGGCAAAAAAGGCCAATGCCCCAAAAGATGTCCGTCAATCCCATGATGCCCATGGATAAATTGCTTCAGTACAACGACCTGACAAACGGACGATCACCAATTCTCAGCATGCACACGTCGTTAGACAGCAGGCACGAATCCAGTCCGTCGTACGACCGCTCGAACTGGGGCGAAGATGTACAATCACCTAGCAATTTCGATGATGAAGCGCCAGTACTTAAGAAGagtaaattaaagaatttaaacGAATTCAAAGAGGGAGAAGGCCAATACGTATGTGACCAATGCGACAAAACCTTCGTCAAGCAAAGCTCCCTCGCAAGGCATAAATATGAACACTCAGGTCAGAGGCCTTACAAATGTGCGGAGTGCGACAAAGCCTTCAAGCACAAACACCACCTGACGGAGCACAAGCGCCTGCACACGGGCGAGAAGCCCTACCAGTGCTGCAAGTGCCTGAAGAAGTTCTCGCATTCGGGCTCCTACAGCCAGCACATGAACCACAGGTTCGCCATCTGCAAGCCCTACAGGGACTAG
Protein Sequence: MNGFKKTLRGMTEMTGGQLELLSRFVAARRPPIVRGGNVAPADSAAETVTSPICRAGPGIEARAKSVTERVFAVRPLAGGGAESKPPEEEEERSGSPLGPGGPFACGYCRGSYPSREQLERHETLHTPSTQVDNIKYSCKICPKSFENVYRLQRHMISHIDCASIRKYKCNDCEKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRNSSRKRTNALVASQLNNNITASNNSFLPILPKYNEAAAAFFASISPQENSYHRPPLGQPAMNPFYMPPGMPMSPASGIAPYSFPASLSQLFEQLASQQYQQSKMESQSPNKFNPSGANPEDLIEEITEEDDKRSEGSAELVMDIEDEDNISIKKEQQDRDTETFARSHAFDTVPENTINGEVENEHSGFDTILKSVNASVAKHFFRPNMENLSPVSGKVCPTVESPPAPHLTIKEEPDDSHRCLKCNIIFNDKNECYEHEKLCGNMFRKHEGLAAQMAETVALNRLEAEMRASIQSGVSASEDEDFGKDDNEDKASLHESDRKIRVRTALTEEQQAVLKGHYALNPRPNREEFKKIAHQIGLDNRVVQVWFQNNRARVRRMTQVVVMTDQPLDLSTKKSSASVTSSPAPSPSCSISVTHSDSEEAVNLSQKSSRSTTPHRSQYLNTYPHSNCSSSSYMDFRLSPSPGENINGQKRPMPQKMSVNPMMPMDKLLQYNDLTNGRSPILSMHTSLDSRHESSPSYDRSNWGEDVQSPSNFDDEAPVLKKSKLKNLNEFKEGEGQYVCDQCDKTFVKQSSLARHKYEHSGQRPYKCAECDKAFKHKHHLTEHKRLHTGEKPYQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205017;
90% Identity: iTF_00642228;
80% Identity: iTF_00642228;