Basic Information

Insect: Elymnias hypermnestra
Gene Symbol: -
Assembly: GCA_015832385.1
Location: JACTOM010000103.1:391016-395633[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.095 7.7 7.9 0.9 1 23 285 307 285 307 0.98

2 9 0.041 3.3 9.0 0.1 2 23 375 396 374 396 0.94

3 9 0.019 1.5 10.1 0.8 1 23 400 422 400 422 0.96

4 9 0.0028 0.22 12.7 1.7 1 23 428 451 428 451 0.85

5 9 0.044 3.6 8.9 1.1 2 23 458 480 457 480 0.91

6 9 1.4e-06 0.00012 23.0 1.3 1 23 486 509 486 509 0.98

7 9 0.0001 0.0082 17.2 1.4 1 23 515 537 515 537 0.98

8 9 1.3e-06 0.00011 23.1 3.4 1 23 543 565 543 565 0.99

9 9 5.5e-07 4.4e-05 24.3 2.7 1 23 571 593 571 594 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.095	7.7	7.9	0.9	1	23	285	307	285	307	0.98
2	9	0.041	3.3	9.0	0.1	2	23	375	396	374	396	0.94
3	9	0.019	1.5	10.1	0.8	1	23	400	422	400	422	0.96
4	9	0.0028	0.22	12.7	1.7	1	23	428	451	428	451	0.85
5	9	0.044	3.6	8.9	1.1	2	23	458	480	457	480	0.91
6	9	1.4e-06	0.00012	23.0	1.3	1	23	486	509	486	509	0.98
7	9	0.0001	0.0082	17.2	1.4	1	23	515	537	515	537	0.98
8	9	1.3e-06	0.00011	23.1	3.4	1	23	543	565	543	565	0.99
9	9	5.5e-07	4.4e-05	24.3	2.7	1	23	571	593	571	594	0.96

Sequence Information

Coding Sequence: ATggctttaataaagaataatggGCCTCTGATAGACCCAGCGCTATGTAGATGCTGTAGAGCGATTAAAAAGTGTAGAATATTAACTACGGAATACACCTGGATGGAACAGAAAGAGGTGTACGCTGACATGATAATGGACTGCTTTGGTATACTTCTTTCACATGTGGATGATGATGCTAAAGAGAGTGGAGTCTGCGCTACATGTGTTGTCCGTTTGCGGGATGCTTGTGCCTTCAGACAGCAAGTATTGCAGTGTGAGGATCTGTTCCTCAGTGCGAAGCTGGAGGATAAAGATGAGGCTAAAAAGTTGACTGAGATTGAGCTCAAAACTGAACCCAAGGATGATGTTAGCGATCACAACTCAGTGGGACACATAGAAAACAACGACATGCCCACTGAATATGATGTTATAGCGAAAGATAGCGTATTCCCTGATGTCAAACcgaagaaagaagaaaaaataGACACAGAGCCCCAAAACGATCTCCCGAAAGAAATGGACATTGACAATGACGATATAGATGACATTGACTATCTTGACAACAGCGTTAATGACTACTCGGGGTCATCGTCCGACTCGGACAAACCTATCAAGAGGAAAGTTAAAGTAAAGAAGACGAAGGTTAAAAGCACTGCAACAAAGAAGAAGGTGGCGAAGAAGAAAGGGACGAaagtgaaaaagaaaaataaagataaagAGTCATCAGTTGAAGAGGACTTAAAGATCAAAAAACAGCAGGTGGAGAAGAAGAATACCTACGACAGAGACTTAGAATGTATGTCAGAAGAGAACTTGTTAACAATCATCCAATACTCCTACGTCTGTCCGTTCAAGAACAGAAGAAACAACTACTACTGCTTCTATTGCAAAGACTACTACCCGAAGCCAGAAGACCTAAGAGAACATACCCTATCCCATGACACAAAGCCGTTCCAACTCTTGATGGGCTATAAGAAGATGCCGAAGCTGGATATAACAAGGATAGACTGCAGACTTTGTCCATTGAAGATAGACAATCTGGAAGTCTTCAAGAACCATGTGGACGAGGTGCACAAGAAGAAGATATACTTCGAAGCACCAGACAAGATGCTGTTGTACCGGTTGACCTGGAATGACTTAGTGTGTGTTATGTGCAATGGTGTCTTCGAGGACTTTAATACCTTAAACACACACATGGTGGAGCATTTCAGCAATTACACATGTGATATCTGCGGGCTCTGCTTCCTGGAGAAGCCTCGTCTTGATGCCCATCTGAAGAGGCACAAAGATGATGAACGGCATACGTGTGAAGTTTGTGGCAAAGTGTTCAAATCAAACCATTACAAGGATATGCATGTGGATATAGTGCACAAAAAGAAAGCAATAATCCGTTGTCCGCGTTGTGATGAGTGTTTTATGTCTTATGCGttgaaaaataaacatttaaccGAGGCCCATGGGCAAAAGCGTACTTATCCGTGTAATTTGTGTGATAAAGTGTACAACAGACAGAAGACCCTCACCGAGCATCAGAGGCGGAACCACCAGAAGGTACTGAAGCACCAATGTGAGTATTGCGATCAGAGATTCTATTTACCATCTCGTTTGAAAGAGCACATTGCAACACACACCGGGGAGAGGAACTTCAGGTGTGAGCACTGTGACAAGAGTTACCCAAGGCTCAAGTCACTCCAATATCACATACGTACCCACACAAACGACAGGAGATACCGTTGTCATATATGTGGGCAGGCTTTCATACAGAATGCAAGTCTCAAGTCTCACATTAAGAGTCACCATCCCGAGTGTGATGTTGAAGGGTGTTACttctaa
Protein Sequence: MALIKNNGPLIDPALCRCCRAIKKCRILTTEYTWMEQKEVYADMIMDCFGILLSHVDDDAKESGVCATCVVRLRDACAFRQQVLQCEDLFLSAKLEDKDEAKKLTEIELKTEPKDDVSDHNSVGHIENNDMPTEYDVIAKDSVFPDVKPKKEEKIDTEPQNDLPKEMDIDNDDIDDIDYLDNSVNDYSGSSSDSDKPIKRKVKVKKTKVKSTATKKKVAKKKGTKVKKKNKDKESSVEEDLKIKKQQVEKKNTYDRDLECMSEENLLTIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTLSHDTKPFQLLMGYKKMPKLDITRIDCRLCPLKIDNLEVFKNHVDEVHKKKIYFEAPDKMLLYRLTWNDLVCVMCNGVFEDFNTLNTHMVEHFSNYTCDICGLCFLEKPRLDAHLKRHKDDERHTCEVCGKVFKSNHYKDMHVDIVHKKKAIIRCPRCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHIATHTGERNFRCEHCDKSYPRLKSLQYHIRTHTNDRRYRCHICGQAFIQNASLKSHIKSHHPECDVEGCYF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01193838;
90% Identity: -
80% Identity: -